RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 IGKV2D-26A0A0A0MRZ7 120 aa3.28□□□□□ -1.88
NCL-208ENST00000466274 KRBOX1C9JBD0 128 aa3.28□□□□□ -1.88
NCL-208ENST00000466274 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.28□□□□□ -1.88
NCL-208ENST00000466274 NUPR1O60356 82 aa3.28□□□□□ -1.88
NCL-208ENST00000466274 NDUFB6O95139 128 aa3.28□□□□□ -1.88
NCL-208ENST00000466274 TCRAP04437 139 aa3.28□□□□□ -1.88
NCL-208ENST00000466274 RPL28P46779 137 aaKnown RBP3.28□□□□□ -1.88
NCL-208ENST00000466274 XCL1P47992 114 aa3.28□□□□□ -1.88
NCL-208ENST00000466274 TMBIM6P55061 237 aa3.28□□□□□ -1.88
NCL-208ENST00000466274 AP3S2P59780 193 aa3.28□□□□□ -1.88
NCL-208ENST00000466274 MEF2BQ02080 365 aaPredicted RBP3.28□□□□□ -1.88
NCL-208ENST00000466274 SS18Q15532 418 aa3.28□□□□□ -1.88
NCL-208ENST00000466274 KRTAP19-2Q3LHN2 52 aa3.28□□□□□ -1.88
NCL-208ENST00000466274 LCE3EQ5T5B0 92 aa3.28□□□□□ -1.88
NCL-208ENST00000466274 SPAG11AQ6PDA7 123 aa3.28□□□□□ -1.88
NCL-208ENST00000466274 TMEM252Q8N6L7 170 aa3.28□□□□□ -1.88
NCL-208ENST00000466274 C5orf17Q8NAS9 161 aa3.28□□□□□ -1.88
NCL-208ENST00000466274 OR5A1Q8NGJ0 315 aa3.28□□□□□ -1.88
NCL-208ENST00000466274 IMMP2LQ96T52 175 aa3.28□□□□□ -1.88
NCL-208ENST00000466274 KIR2DL4Q99706 377 aa3.28□□□□□ -1.88
NCL-208ENST00000466274 LSM5Q9Y4Y9 91 aaKnown RBP3.28□□□□□ -1.88
NCL-208ENST00000466274 GRIFINA4D1Z8 144 aa3.27□□□□□ -1.89
NCL-208ENST00000466274 M0QXV9 152 aa3.27□□□□□ -1.89
NCL-208ENST00000466274 M0R036 132 aa3.27□□□□□ -1.89
NCL-208ENST00000466274 ESDP10768 282 aa3.27□□□□□ -1.89
NCL-208ENST00000466274 COTL1Q14019 142 aa3.27□□□□□ -1.89
NCL-208ENST00000466274 FAM229BQ4G0N7 80 aa3.27□□□□□ -1.89
NCL-208ENST00000466274 FAM19A5Q7Z5A7 132 aaPredicted RBP3.27□□□□□ -1.89
NCL-208ENST00000466274 KRTAP11-1Q8IUC1 163 aa3.27□□□□□ -1.89
NCL-208ENST00000466274 TOMM5Q8N4H5 51 aa3.27□□□□□ -1.89
NCL-208ENST00000466274 PGLYRP4Q96LB8 373 aa3.27□□□□□ -1.89
NCL-208ENST00000466274 C2orf48Q96LS8 159 aa3.27□□□□□ -1.89
NCL-208ENST00000466274 ZNF471Q9BX82 626 aaPredicted RBP3.27□□□□□ -1.89
NCL-208ENST00000466274 VCX3AQ9NNX9 186 aa3.27□□□□□ -1.89
NCL-208ENST00000466274 CCL25O15444 150 aa3.26□□□□□ -1.89
NCL-208ENST00000466274 RPL12P30050 165 aaKnown RBP3.26□□□□□ -1.89
NCL-208ENST00000466274 SPANXN1Q5VSR9 72 aa3.26□□□□□ -1.89
NCL-208ENST00000466274 RNASEKQ6P5S7 137 aaKnown RBP3.26□□□□□ -1.89
NCL-208ENST00000466274 CD164L2Q6UWJ8 174 aa3.26□□□□□ -1.89
NCL-208ENST00000466274 DAND5Q8N907 189 aa3.26□□□□□ -1.89
NCL-208ENST00000466274 OR2D3Q8NGH3 330 aa3.26□□□□□ -1.89
NCL-208ENST00000466274 NDUFA12Q9UI09 145 aa3.26□□□□□ -1.89
NCL-208ENST00000466274 UBE2D4Q9Y2X8 147 aa3.26□□□□□ -1.89
NCL-208ENST00000466274 A0A1W2PPV4 95 aa3.25□□□□□ -1.89
NCL-208ENST00000466274 H7C423 109 aa3.25□□□□□ -1.89
NCL-208ENST00000466274 CRIP1P50238 77 aa3.25□□□□□ -1.89
NCL-208ENST00000466274 PNRC1Q12796 327 aaPredicted RBP3.25□□□□□ -1.89
NCL-208ENST00000466274 KRTAP6-3Q3LI67 103 aa3.25□□□□□ -1.89
NCL-208ENST00000466274 KIAA1644Q3SXP7 199 aa3.25□□□□□ -1.89
NCL-208ENST00000466274 PYDC2Q56P42 97 aa3.25□□□□□ -1.89
NCL-208ENST00000466274 COX6B2Q6YFQ2 88 aa3.25□□□□□ -1.89
NCL-208ENST00000466274 DEDD2Q8WXF8 326 aa3.25□□□□□ -1.89
NCL-208ENST00000466274 TMEM101Q96IK0 257 aa3.25□□□□□ -1.89
NCL-208ENST00000466274 BTF3L4Q96K17 158 aa3.25□□□□□ -1.89
NCL-208ENST00000466274 OPRPNQ99935 248 aaPredicted RBP3.25□□□□□ -1.89
NCL-208ENST00000466274 SEC22CQ9BRL7 303 aa3.25□□□□□ -1.89
NCL-208ENST00000466274 WDR61Q9GZS3 305 aaKnown RBP3.25□□□□□ -1.89
NCL-208ENST00000466274 RPS10P5Q9NQ39 176 aa3.25□□□□□ -1.89
NCL-208ENST00000466274 EPDR1Q9UM22 224 aa3.25□□□□□ -1.89
NCL-208ENST00000466274 LINC00959A0A1B0GUT2 108 aa3.24□□□□□ -1.89
NCL-208ENST00000466274 FAM168BA1KXE4 195 aa3.24□□□□□ -1.89
NCL-208ENST00000466274 F8WDY8 70 aa3.24□□□□□ -1.89
NCL-208ENST00000466274 COX7A2LO14548 114 aa3.24□□□□□ -1.89
NCL-208ENST00000466274 HMGB3O15347 200 aaKnown RBP3.24□□□□□ -1.89
NCL-208ENST00000466274 BCL2L11O43521 198 aa3.24□□□□□ -1.89
NCL-208ENST00000466274 ZNF25P17030 456 aaPredicted RBP3.24□□□□□ -1.89
NCL-208ENST00000466274 NKX2-5P52952 324 aaPredicted RBP3.24□□□□□ -1.89
NCL-208ENST00000466274 KRTAP13-2Q52LG2 175 aa3.24□□□□□ -1.89
NCL-208ENST00000466274 AP1S3Q96PC3 154 aa3.24□□□□□ -1.89
NCL-208ENST00000466274 ARL2-SNX15V9GYD0 113 aa3.24□□□□□ -1.89
NCL-208ENST00000466274 IGLV8-61A0A075B6I0 122 aa3.23□□□□□ -1.89
NCL-208ENST00000466274 TMSB15BA0A087X1C1 80 aa3.23□□□□□ -1.89
NCL-208ENST00000466274 IGLV9-49A0A0B4J1Y8 123 aa3.23□□□□□ -1.89
NCL-208ENST00000466274 FAM25EA8MYX2 175 aa3.23□□□□□ -1.89
NCL-208ENST00000466274 KRTAP4-16G5E9R7 235 aaPredicted RBP3.23□□□□□ -1.89
NCL-208ENST00000466274 M0QY20 66 aa3.23□□□□□ -1.89
NCL-208ENST00000466274 PLA2G10O15496 165 aa3.23□□□□□ -1.89
NCL-208ENST00000466274 SH2D1AO60880 128 aa3.23□□□□□ -1.89
NCL-208ENST00000466274 TMEM241Q24JQ0 296 aa3.23□□□□□ -1.89
NCL-208ENST00000466274 KRTAP20-1Q3LI63 56 aa3.23□□□□□ -1.89
NCL-208ENST00000466274 LBHQ53QV2 105 aaPredicted RBP3.23□□□□□ -1.89
NCL-208ENST00000466274 LCE3AQ5TA76 89 aa3.23□□□□□ -1.89
NCL-208ENST00000466274 ANAPC11Q9NYG5 84 aa3.23□□□□□ -1.89
NCL-208ENST00000466274 MRPL35Q9NZE8 188 aaKnown RBP3.23□□□□□ -1.89
NCL-208ENST00000466274 ZFP30Q9Y2G7 519 aa3.23□□□□□ -1.89
NCL-208ENST00000466274 BCE1O60756 84 aa3.22□□□□□ -1.89
NCL-208ENST00000466274 MGPP08493 103 aa3.22□□□□□ -1.89
NCL-208ENST00000466274 TLX1NBP0CAT3 122 aa3.22□□□□□ -1.89
NCL-208ENST00000466274 LINC00242Q5T6M2 205 aa3.22□□□□□ -1.89
NCL-208ENST00000466274 RASL11AQ6T310 242 aa3.22□□□□□ -1.89
NCL-208ENST00000466274 SCGB1C1Q8TD33 95 aa3.22□□□□□ -1.89
NCL-208ENST00000466274 NIT2Q9NQR4 276 aa3.22□□□□□ -1.89
NCL-208ENST00000466274 C1orf196B1AJZ1 125 aa3.21□□□□□ -1.9
NCL-208ENST00000466274 G3V3Q6 166 aa3.21□□□□□ -1.9
NCL-208ENST00000466274 NDUFA1O15239 70 aa3.21□□□□□ -1.9
NCL-208ENST00000466274 SIX6O95475 246 aa3.21□□□□□ -1.9
NCL-208ENST00000466274 NCR2O95944 276 aa3.21□□□□□ -1.9
NCL-208ENST00000466274 CXCL1P09341 107 aa3.21□□□□□ -1.9
NCL-208ENST00000466274 ARL14EPLP0DKL9 152 aa3.21□□□□□ -1.9
NCL-208ENST00000466274 SPAG11BQ08648 103 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms