RNA–Protein interactions for RNA: ENST00000465858.1

TFAP2A-207, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 3

Gene TFAP2A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-207ENST00000465858 MRPL52Q86TS9 123 aaKnown RBP12.95□□□□□ -0.34
TFAP2A-207ENST00000465858 C15orf56Q8N910 161 aa12.95□□□□□ -0.34
TFAP2A-207ENST00000465858 HBBP68871 147 aa12.94□□□□□ -0.34
TFAP2A-207ENST00000465858 FAM104AQ969W3 186 aa12.94□□□□□ -0.34
TFAP2A-207ENST00000465858 VCYO14598 125 aa12.93□□□□□ -0.34
TFAP2A-207ENST00000465858 RNASEKQ6P5S7 137 aaKnown RBP12.93□□□□□ -0.34
TFAP2A-207ENST00000465858 C9orf163Q8N9P6 203 aa12.93□□□□□ -0.34
TFAP2A-207ENST00000465858 CDC42SE2Q9NRR3 84 aa12.93□□□□□ -0.34
TFAP2A-207ENST00000465858 LINC00862A6NCI5 91 aa12.92□□□□□ -0.34
TFAP2A-207ENST00000465858 GAGE12HA6NDE8 117 aa12.92□□□□□ -0.34
TFAP2A-207ENST00000465858 PANO1I0J062 215 aa12.92□□□□□ -0.34
TFAP2A-207ENST00000465858 ZNF25P17030 456 aaPredicted RBP12.92□□□□□ -0.34
TFAP2A-207ENST00000465858 RPL32P62910 135 aaKnown RBP12.92□□□□□ -0.34
TFAP2A-207ENST00000465858 PNRC1Q12796 327 aaPredicted RBP12.92□□□□□ -0.34
TFAP2A-207ENST00000465858 DGAT2L7PQ6IED9 249 aa12.92□□□□□ -0.34
TFAP2A-207ENST00000465858 IGKV3OR2-268A0A0C4DH90 116 aa12.91□□□□□ -0.34
TFAP2A-207ENST00000465858 D6R8Y8 96 aa12.91□□□□□ -0.34
TFAP2A-207ENST00000465858 NPYP01303 97 aa12.91□□□□□ -0.34
TFAP2A-207ENST00000465858 HNRNPA3P51991 378 aaKnown RBP12.91□□□□□ -0.34
TFAP2A-207ENST00000465858 CNBPP62633 177 aaKnown RBP12.91□□□□□ -0.34
TFAP2A-207ENST00000465858 FOXI1Q12951 378 aa12.91□□□□□ -0.34
TFAP2A-207ENST00000465858 AMMECR1LQ6DCA0 310 aa12.91□□□□□ -0.34
TFAP2A-207ENST00000465858 OR5A1Q8NGJ0 315 aa12.91□□□□□ -0.34
TFAP2A-207ENST00000465858 CHCHD10Q8WYQ3 142 aaPredicted RBP12.91□□□□□ -0.34
TFAP2A-207ENST00000465858 C20orf78Q9BR46 151 aa12.91□□□□□ -0.34
TFAP2A-207ENST00000465858 C7orf77A4D0Y5 90 aa12.9□□□□□ -0.34
TFAP2A-207ENST00000465858 PPP1R2P9O14990 202 aa12.9□□□□□ -0.34
TFAP2A-207ENST00000465858 TNFRSF6BO95407 300 aa12.9□□□□□ -0.34
TFAP2A-207ENST00000465858 PPP1R17O96001 155 aa12.9□□□□□ -0.34
TFAP2A-207ENST00000465858 SDIM1Q6ZPB5 146 aa12.9□□□□□ -0.34
TFAP2A-207ENST00000465858 ATP5L2Q7Z4Y8 100 aa12.9□□□□□ -0.34
TFAP2A-207ENST00000465858 CLRN3Q8NCR9 226 aa12.9□□□□□ -0.34
TFAP2A-207ENST00000465858 LINC00959A0A1B0GUT2 108 aa12.89□□□□□ -0.35
TFAP2A-207ENST00000465858 CKS2P33552 79 aa12.89□□□□□ -0.35
TFAP2A-207ENST00000465858 UBE2D4Q9Y2X8 147 aa12.89□□□□□ -0.35
TFAP2A-207ENST00000465858 ANAPC16Q96DE5 110 aa12.88□□□□□ -0.35
TFAP2A-207ENST00000465858 TMEM218A2RU14 115 aa12.87□□□□□ -0.35
TFAP2A-207ENST00000465858 MT1HL1P0DM35 61 aa12.87□□□□□ -0.35
TFAP2A-207ENST00000465858 SMIM2Q9BVW6 85 aa12.87□□□□□ -0.35
TFAP2A-207ENST00000465858 CSDC2Q9Y534 153 aaKnown RBP12.87□□□□□ -0.35
TFAP2A-207ENST00000465858 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.87□□□□□ -0.35
TFAP2A-207ENST00000465858 S100A8P05109 93 aa12.86□□□□□ -0.35
TFAP2A-207ENST00000465858 UQCC3Q6UW78 93 aa12.86□□□□□ -0.35
TFAP2A-207ENST00000465858 ZNF664Q8N3J9 261 aa12.86□□□□□ -0.35
TFAP2A-207ENST00000465858 hDV102S1A0JD36 115 aa12.85□□□□□ -0.35
TFAP2A-207ENST00000465858 F8W036 122 aa12.85□□□□□ -0.35
TFAP2A-207ENST00000465858 PHOX2AO14813 284 aa12.85□□□□□ -0.35
TFAP2A-207ENST00000465858 MT-ND4LP03901 98 aa12.85□□□□□ -0.35
TFAP2A-207ENST00000465858 CIRBPQ14011 172 aaKnown RBP12.85□□□□□ -0.35
TFAP2A-207ENST00000465858 CCL25O15444 150 aa12.84□□□□□ -0.35
TFAP2A-207ENST00000465858 RPL39P62891 51 aaKnown RBP12.84□□□□□ -0.35
TFAP2A-207ENST00000465858 KIR2DL4Q99706 377 aa12.84□□□□□ -0.35
TFAP2A-207ENST00000465858 GVQW2A0A096LPI5 108 aaPredicted RBP12.83□□□□□ -0.36
TFAP2A-207ENST00000465858 PRSS47A8MTI9 375 aa12.83□□□□□ -0.36
TFAP2A-207ENST00000465858 PPBPP02775 128 aa12.83□□□□□ -0.36
TFAP2A-207ENST00000465858 FCER1GP30273 86 aa12.83□□□□□ -0.36
TFAP2A-207ENST00000465858 RNASE13Q5GAN3 156 aaKnown RBP12.83□□□□□ -0.36
TFAP2A-207ENST00000465858 TMEM101Q96IK0 257 aa12.83□□□□□ -0.36
TFAP2A-207ENST00000465858 BTF3L4Q96K17 158 aa12.83□□□□□ -0.36
TFAP2A-207ENST00000465858 TIMM21Q9BVV7 248 aa12.83□□□□□ -0.36
TFAP2A-207ENST00000465858 XCL1P47992 114 aa12.82□□□□□ -0.36
TFAP2A-207ENST00000465858 TMEM136Q6ZRR5 245 aa12.82□□□□□ -0.36
TFAP2A-207ENST00000465858 Q6ZRU5 148 aa12.82□□□□□ -0.36
TFAP2A-207ENST00000465858 Q6ZUT4 128 aa12.82□□□□□ -0.36
TFAP2A-207ENST00000465858 TCAPO15273 167 aa12.81□□□□□ -0.36
TFAP2A-207ENST00000465858 HIGD2BQ4VC39 106 aa12.81□□□□□ -0.36
TFAP2A-207ENST00000465858 C10orf91Q5T1B1 145 aa12.81□□□□□ -0.36
TFAP2A-207ENST00000465858 ORMDL3Q8N138 153 aa12.81□□□□□ -0.36
TFAP2A-207ENST00000465858 PRELID3AQ96N28 172 aa12.81□□□□□ -0.36
TFAP2A-207ENST00000465858 CD164L2Q6UWJ8 174 aa12.79□□□□□ -0.36
TFAP2A-207ENST00000465858 IMMP2LQ96T52 175 aa12.79□□□□□ -0.36
TFAP2A-207ENST00000465858 OPRPNQ99935 248 aaPredicted RBP12.79□□□□□ -0.36
TFAP2A-207ENST00000465858 SEC11CQ9BY50 192 aa12.79□□□□□ -0.36
TFAP2A-207ENST00000465858 COMMD7Q86VX2 200 aa12.78□□□□□ -0.36
TFAP2A-207ENST00000465858 CHTF8P0CG12 524 aa12.77□□□□□ -0.37
TFAP2A-207ENST00000465858 CFAP161Q6P656 301 aa12.77□□□□□ -0.37
TFAP2A-207ENST00000465858 LINC00526Q96FQ7 95 aa12.77□□□□□ -0.37
TFAP2A-207ENST00000465858 LRP2P98164 4655 aa12.75□□□□□ -0.37
TFAP2A-207ENST00000465858 SS18Q15532 418 aa12.75□□□□□ -0.37
TFAP2A-207ENST00000465858 LAMTOR2Q9Y2Q5 125 aa12.75□□□□□ -0.37
TFAP2A-207ENST00000465858 IGHV3-64A0A075B6Q5 118 aa12.74□□□□□ -0.37
TFAP2A-207ENST00000465858 MRPS36P82909 103 aaKnown RBP12.74□□□□□ -0.37
TFAP2A-207ENST00000465858 PRSS3P2Q8NHM4 247 aa12.74□□□□□ -0.37
TFAP2A-207ENST00000465858 SPACA4Q8TDM5 124 aa12.74□□□□□ -0.37
TFAP2A-207ENST00000465858 CTDSP1Q9GZU7 261 aa12.74□□□□□ -0.37
TFAP2A-207ENST00000465858 SPANXA1Q9NS26 97 aa12.74□□□□□ -0.37
TFAP2A-207ENST00000465858 AP5S1Q9NUS5 200 aa12.74□□□□□ -0.37
TFAP2A-207ENST00000465858 TRAV13-1A0A0B4J241 112 aa12.73□□□□□ -0.37
TFAP2A-207ENST00000465858 IGHV1-58A0A0C4DH39 117 aa12.73□□□□□ -0.37
TFAP2A-207ENST00000465858 C1orf196B1AJZ1 125 aa12.73□□□□□ -0.37
TFAP2A-207ENST00000465858 CARHSP1Q9Y2V2 147 aaKnown RBP12.73□□□□□ -0.37
TFAP2A-207ENST00000465858 TNXBP22105 4242 aa12.72□□□□□ -0.37
TFAP2A-207ENST00000465858 Q8N8P6 123 aa12.72□□□□□ -0.37
TFAP2A-207ENST00000465858 TMEM18Q96B42 140 aa12.72□□□□□ -0.37
TFAP2A-207ENST00000465858 RNF213Q63HN8 5207 aa12.72□□□□□ -0.37
TFAP2A-207ENST00000465858 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.71□□□□□ -0.37
TFAP2A-207ENST00000465858 LOC389332A0A1B0GUA5 103 aa12.71□□□□□ -0.37
TFAP2A-207ENST00000465858 COX6A2Q02221 97 aa12.71□□□□□ -0.37
TFAP2A-207ENST00000465858 PYGO1Q9Y3Y4 419 aa12.71□□□□□ -0.37
TFAP2A-207ENST00000465858 TRAV9-1A0A075B6T8 112 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms