RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 COX6A2Q02221 97 aa9.83□□□□□ -0.84
HOXB3-204ENST00000465120 CIRBPQ14011 172 aaKnown RBP9.83□□□□□ -0.84
HOXB3-204ENST00000465120 RHEBQ15382 184 aa9.83□□□□□ -0.84
HOXB3-204ENST00000465120 ST20Q9HBF5 79 aa9.83□□□□□ -0.84
HOXB3-204ENST00000465120 IGKV2-24A0A0C4DH68 120 aa9.82□□□□□ -0.84
HOXB3-204ENST00000465120 SPACA4Q8TDM5 124 aa9.82□□□□□ -0.84
HOXB3-204ENST00000465120 A0A1B0GUT8 65 aa9.81□□□□□ -0.84
HOXB3-204ENST00000465120 ZNF25P17030 456 aaPredicted RBP9.81□□□□□ -0.84
HOXB3-204ENST00000465120 XCL1P47992 114 aa9.81□□□□□ -0.84
HOXB3-204ENST00000465120 MAJINQ3KP22 176 aa9.81□□□□□ -0.84
HOXB3-204ENST00000465120 CT83Q5H943 113 aa9.81□□□□□ -0.84
HOXB3-204ENST00000465120 OR5A1Q8NGJ0 315 aa9.81□□□□□ -0.84
HOXB3-204ENST00000465120 C7orf33Q8WU49 177 aa9.81□□□□□ -0.84
HOXB3-204ENST00000465120 TMEM242Q9NWH2 141 aa9.81□□□□□ -0.84
HOXB3-204ENST00000465120 PLA2G2DQ9UNK4 145 aa9.81□□□□□ -0.84
HOXB3-204ENST00000465120 TRBV6-5A0A0K0K1A5 114 aa9.8□□□□□ -0.84
HOXB3-204ENST00000465120 HIGD1CA8MV81 97 aa9.8□□□□□ -0.84
HOXB3-204ENST00000465120 PRSS3P2Q8NHM4 247 aa9.8□□□□□ -0.84
HOXB3-204ENST00000465120 MRAP2Q96G30 205 aa9.8□□□□□ -0.84
HOXB3-204ENST00000465120 FAM231BA6NCW3 169 aa9.79□□□□□ -0.84
HOXB3-204ENST00000465120 CCL25O15444 150 aa9.79□□□□□ -0.84
HOXB3-204ENST00000465120 GAS8-AS1O95177 125 aa9.79□□□□□ -0.84
HOXB3-204ENST00000465120 MT-ND4LP03901 98 aa9.79□□□□□ -0.84
HOXB3-204ENST00000465120 FOXI1Q12951 378 aa9.79□□□□□ -0.84
HOXB3-204ENST00000465120 Q6ZRU5 148 aa9.79□□□□□ -0.84
HOXB3-204ENST00000465120 TSKUQ8WUA8 353 aa9.79□□□□□ -0.84
HOXB3-204ENST00000465120 CTDSP1Q9GZU7 261 aa9.79□□□□□ -0.84
HOXB3-204ENST00000465120 TMEM191AQ9H0A3 160 aa9.79□□□□□ -0.84
HOXB3-204ENST00000465120 PLAC8Q9NZF1 115 aa9.79□□□□□ -0.84
HOXB3-204ENST00000465120 GVQW2A0A096LPI5 108 aaPredicted RBP9.78□□□□□ -0.84
HOXB3-204ENST00000465120 LINC00959A0A1B0GUT2 108 aa9.78□□□□□ -0.84
HOXB3-204ENST00000465120 PHOX2AO14813 284 aa9.78□□□□□ -0.84
HOXB3-204ENST00000465120 PPP1R2P9O14990 202 aa9.78□□□□□ -0.84
HOXB3-204ENST00000465120 TSHBP01222 138 aa9.78□□□□□ -0.84
HOXB3-204ENST00000465120 SS18Q15532 418 aa9.78□□□□□ -0.84
HOXB3-204ENST00000465120 ADIRFQ15847 76 aa9.78□□□□□ -0.84
HOXB3-204ENST00000465120 LINC01551Q86U37 167 aa9.78□□□□□ -0.84
HOXB3-204ENST00000465120 RPS10P5Q9NQ39 176 aa9.78□□□□□ -0.84
HOXB3-204ENST00000465120 C7orf77A4D0Y5 90 aa9.77□□□□□ -0.85
HOXB3-204ENST00000465120 ESDP10768 282 aa9.77□□□□□ -0.85
HOXB3-204ENST00000465120 RAB4AP20338 218 aa9.77□□□□□ -0.85
HOXB3-204ENST00000465120 RPL23P62829 140 aaKnown RBP9.77□□□□□ -0.85
HOXB3-204ENST00000465120 AMN1Q8IY45 258 aa9.77□□□□□ -0.85
HOXB3-204ENST00000465120 STPG4Q8N801 248 aa9.77□□□□□ -0.85
HOXB3-204ENST00000465120 ANAPC16Q96DE5 110 aa9.77□□□□□ -0.85
HOXB3-204ENST00000465120 OSTCQ9NRP0 149 aa9.77□□□□□ -0.85
HOXB3-204ENST00000465120 IGHV1-58A0A0C4DH39 117 aa9.76□□□□□ -0.85
HOXB3-204ENST00000465120 FCER1GP30273 86 aa9.76□□□□□ -0.85
HOXB3-204ENST00000465120 RIGQ13278 110 aa9.76□□□□□ -0.85
HOXB3-204ENST00000465120 LINC00526Q96FQ7 95 aa9.76□□□□□ -0.85
HOXB3-204ENST00000465120 SMCO4Q9NRQ5 59 aa9.76□□□□□ -0.85
HOXB3-204ENST00000465120 HMCN2Q8NDA2 5059 aa9.76□□□□□ -0.85
HOXB3-204ENST00000465120 SMKR1H3BMG3 65 aa9.75□□□□□ -0.85
HOXB3-204ENST00000465120 ZNF561-AS1K7EIQ3 104 aa9.75□□□□□ -0.85
HOXB3-204ENST00000465120 POLR2KP53803 58 aaKnown RBP9.75□□□□□ -0.85
HOXB3-204ENST00000465120 ZNF664Q8N3J9 261 aa9.75□□□□□ -0.85
HOXB3-204ENST00000465120 CDC42SE2Q9NRR3 84 aa9.75□□□□□ -0.85
HOXB3-204ENST00000465120 A0A096LNI7 61 aa9.74□□□□□ -0.85
HOXB3-204ENST00000465120 TRBV27A0A0K0K1C4 114 aa9.74□□□□□ -0.85
HOXB3-204ENST00000465120 VCYO14598 125 aa9.74□□□□□ -0.85
HOXB3-204ENST00000465120 ISOC2Q96AB3 205 aa9.74□□□□□ -0.85
HOXB3-204ENST00000465120 CARD19Q96LW7 228 aa9.74□□□□□ -0.85
HOXB3-204ENST00000465120 PKIGQ9Y2B9 76 aa9.74□□□□□ -0.85
HOXB3-204ENST00000465120 MALP21145 153 aa9.73□□□□□ -0.85
HOXB3-204ENST00000465120 CD164L2Q6UWJ8 174 aa9.73□□□□□ -0.85
HOXB3-204ENST00000465120 MRPL52Q86TS9 123 aaKnown RBP9.73□□□□□ -0.85
HOXB3-204ENST00000465120 NUP35Q8NFH5 326 aa9.73□□□□□ -0.85
HOXB3-204ENST00000465120 LINC00474Q9P2X8 69 aa9.73□□□□□ -0.85
HOXB3-204ENST00000465120 PPP1R17O96001 155 aa9.72□□□□□ -0.85
HOXB3-204ENST00000465120 S100PP25815 95 aa9.72□□□□□ -0.85
HOXB3-204ENST00000465120 SMAGPQ0VAQ4 97 aa9.72□□□□□ -0.85
HOXB3-204ENST00000465120 KIR2DL4Q99706 377 aa9.72□□□□□ -0.85
HOXB3-204ENST00000465120 V9GYV3 84 aa9.72□□□□□ -0.85
HOXB3-204ENST00000465120 MT1HL1P0DM35 61 aa9.71□□□□□ -0.86
HOXB3-204ENST00000465120 SYCNQ0VAF6 134 aa9.71□□□□□ -0.86
HOXB3-204ENST00000465120 IMMP2LQ96T52 175 aa9.71□□□□□ -0.86
HOXB3-204ENST00000465120 NAT8BQ9UHF3 227 aa9.71□□□□□ -0.86
HOXB3-204ENST00000465120 C1orf196B1AJZ1 125 aa9.7□□□□□ -0.86
HOXB3-204ENST00000465120 CAMPP49913 170 aa9.7□□□□□ -0.86
HOXB3-204ENST00000465120 SUMO2P61956 95 aaKnown RBP9.7□□□□□ -0.86
HOXB3-204ENST00000465120 RNASE13Q5GAN3 156 aaKnown RBP9.7□□□□□ -0.86
HOXB3-204ENST00000465120 COX7A2LO14548 114 aa9.69□□□□□ -0.86
HOXB3-204ENST00000465120 SCO1O75880 301 aa9.69□□□□□ -0.86
HOXB3-204ENST00000465120 PRR3P79522 188 aaKnown RBP9.69□□□□□ -0.86
HOXB3-204ENST00000465120 TRAV13-1A0A0B4J241 112 aa9.68□□□□□ -0.86
HOXB3-204ENST00000465120 GAGE2BQ13066 116 aa9.68□□□□□ -0.86
HOXB3-204ENST00000465120 MRPL51Q4U2R6 128 aaKnown RBP9.68□□□□□ -0.86
HOXB3-204ENST00000465120 NRACQ8N912 160 aa9.68□□□□□ -0.86
HOXB3-204ENST00000465120 TMEM18Q96B42 140 aa9.68□□□□□ -0.86
HOXB3-204ENST00000465120 UBE2D4Q9Y2X8 147 aa9.68□□□□□ -0.86
HOXB3-204ENST00000465120 UBR4Q5T4S7 5183 aa9.67□□□□□ -0.86
HOXB3-204ENST00000465120 IGLV4-69A0A075B6H9 119 aa9.67□□□□□ -0.86
HOXB3-204ENST00000465120 CKS2P33552 79 aa9.67□□□□□ -0.86
HOXB3-204ENST00000465120 FAM104BQ5XKR9 115 aa9.67□□□□□ -0.86
HOXB3-204ENST00000465120 TRAV9-1A0A075B6T8 112 aa9.66□□□□□ -0.86
HOXB3-204ENST00000465120 LOC107984640A0A0U1RRK4 108 aa9.66□□□□□ -0.86
HOXB3-204ENST00000465120 C5orf38Q86SI9 138 aa9.66□□□□□ -0.86
HOXB3-204ENST00000465120 CBLN2Q8IUK8 224 aa9.66□□□□□ -0.86
HOXB3-204ENST00000465120 CAMK2N2Q96S95 79 aa9.66□□□□□ -0.86
HOXB3-204ENST00000465120 CSDC2Q9Y534 153 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms