RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 IGLV5-52A0A0A0MRZ9 124 aa11.57□□□□□ -0.56
VPS52-214ENST00000463486 GCSHP23434 173 aa11.57□□□□□ -0.56
VPS52-214ENST00000463486 FCER1GP30273 86 aa11.57□□□□□ -0.56
VPS52-214ENST00000463486 USP17L23D6RBM5 183 aa11.56□□□□□ -0.56
VPS52-214ENST00000463486 FAM104AQ969W3 186 aa11.56□□□□□ -0.56
VPS52-214ENST00000463486 UBE2D4Q9Y2X8 147 aa11.56□□□□□ -0.56
VPS52-214ENST00000463486 HLA-DQA1P01909 254 aa11.55□□□□□ -0.56
VPS52-214ENST00000463486 OR5A1Q8NGJ0 315 aa11.55□□□□□ -0.56
VPS52-214ENST00000463486 RPS10P5Q9NQ39 176 aa11.55□□□□□ -0.56
VPS52-214ENST00000463486 LAMTOR2Q9Y2Q5 125 aa11.55□□□□□ -0.56
VPS52-214ENST00000463486 CSDC2Q9Y534 153 aaKnown RBP11.55□□□□□ -0.56
VPS52-214ENST00000463486 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.54□□□□□ -0.56
VPS52-214ENST00000463486 TCAPO15273 167 aa11.54□□□□□ -0.56
VPS52-214ENST00000463486 PRSS1P07477 247 aa11.54□□□□□ -0.56
VPS52-214ENST00000463486 XGP55808 180 aa11.54□□□□□ -0.56
VPS52-214ENST00000463486 ZNF664Q8N3J9 261 aa11.54□□□□□ -0.56
VPS52-214ENST00000463486 APOC3P02656 99 aa11.53□□□□□ -0.56
VPS52-214ENST00000463486 RPL39P62891 51 aaKnown RBP11.53□□□□□ -0.56
VPS52-214ENST00000463486 TMEM101Q96IK0 257 aa11.53□□□□□ -0.56
VPS52-214ENST00000463486 TIMM21Q9BVV7 248 aa11.53□□□□□ -0.56
VPS52-214ENST00000463486 IGKV3OR2-268A0A0C4DH90 116 aa11.52□□□□□ -0.57
VPS52-214ENST00000463486 S100PP25815 95 aa11.52□□□□□ -0.57
VPS52-214ENST00000463486 CHCHD10Q8WYQ3 142 aaPredicted RBP11.52□□□□□ -0.57
VPS52-214ENST00000463486 GNB1LQ9BYB4 327 aa11.52□□□□□ -0.57
VPS52-214ENST00000463486 LINC00959A0A1B0GUT2 108 aa11.51□□□□□ -0.57
VPS52-214ENST00000463486 GAGE12HA6NDE8 117 aa11.51□□□□□ -0.57
VPS52-214ENST00000463486 FAM30AQ9NZY2 134 aa11.51□□□□□ -0.57
VPS52-214ENST00000463486 LOC389332A0A1B0GUA5 103 aa11.5□□□□□ -0.57
VPS52-214ENST00000463486 FOXI1Q12951 378 aa11.5□□□□□ -0.57
VPS52-214ENST00000463486 KIAA1644Q3SXP7 199 aa11.5□□□□□ -0.57
VPS52-214ENST00000463486 LINC01620Q4KN68 170 aa11.5□□□□□ -0.57
VPS52-214ENST00000463486 C14orf177Q52M58 125 aa11.5□□□□□ -0.57
VPS52-214ENST00000463486 SVBPQ8N300 66 aa11.5□□□□□ -0.57
VPS52-214ENST00000463486 Q8N8P6 123 aa11.5□□□□□ -0.57
VPS52-214ENST00000463486 Q6ZSA8 131 aa11.49□□□□□ -0.57
VPS52-214ENST00000463486 MAP1LC3AQ9H492 121 aa11.49□□□□□ -0.57
VPS52-214ENST00000463486 SNAPINO95295 136 aa11.48□□□□□ -0.57
VPS52-214ENST00000463486 SLPIP03973 132 aa11.48□□□□□ -0.57
VPS52-214ENST00000463486 Q6ZUT4 128 aa11.48□□□□□ -0.57
VPS52-214ENST00000463486 C15orf56Q8N910 161 aa11.48□□□□□ -0.57
VPS52-214ENST00000463486 OPRPNQ99935 248 aaPredicted RBP11.48□□□□□ -0.57
VPS52-214ENST00000463486 KRTAP4-5Q9BYR2 181 aa11.48□□□□□ -0.57
VPS52-214ENST00000463486 VPS13BQ7Z7G8 4022 aa11.47□□□□□ -0.57
VPS52-214ENST00000463486 TGIF2-C20orf24A0A0A6YYL0 155 aa11.47□□□□□ -0.57
VPS52-214ENST00000463486 RNASE13Q5GAN3 156 aaKnown RBP11.47□□□□□ -0.57
VPS52-214ENST00000463486 DGAT2L7PQ6IED9 249 aa11.47□□□□□ -0.57
VPS52-214ENST00000463486 SLC7A5P1Q8MH63 180 aa11.47□□□□□ -0.57
VPS52-214ENST00000463486 TMEM18Q96B42 140 aa11.47□□□□□ -0.57
VPS52-214ENST00000463486 YPEL4Q96NS1 127 aa11.47□□□□□ -0.57
VPS52-214ENST00000463486 CCL25O15444 150 aa11.46□□□□□ -0.57
VPS52-214ENST00000463486 RAB5AP20339 215 aa11.46□□□□□ -0.57
VPS52-214ENST00000463486 IFI27P40305 119 aaPredicted RBP11.46□□□□□ -0.57
VPS52-214ENST00000463486 XCL1P47992 114 aa11.46□□□□□ -0.57
VPS52-214ENST00000463486 SMAGPQ0VAQ4 97 aa11.46□□□□□ -0.57
VPS52-214ENST00000463486 NDUFA5Q16718 116 aa11.46□□□□□ -0.57
VPS52-214ENST00000463486 COX19Q49B96 90 aa11.46□□□□□ -0.57
VPS52-214ENST00000463486 ALKBH7Q9BT30 221 aaPredicted RBP11.46□□□□□ -0.57
VPS52-214ENST00000463486 SPANXA1Q9NS26 97 aa11.46□□□□□ -0.57
VPS52-214ENST00000463486 MRPS36P82909 103 aaKnown RBP11.45□□□□□ -0.58
VPS52-214ENST00000463486 PYGO1Q9Y3Y4 419 aa11.45□□□□□ -0.58
VPS52-214ENST00000463486 K7EMI3 77 aa11.44□□□□□ -0.58
VPS52-214ENST00000463486 MT-ND6P03923 174 aa11.44□□□□□ -0.58
VPS52-214ENST00000463486 CNBPP62633 177 aaKnown RBP11.44□□□□□ -0.58
VPS52-214ENST00000463486 CD164L2Q6UWJ8 174 aa11.44□□□□□ -0.58
VPS52-214ENST00000463486 C9orf163Q8N9P6 203 aa11.44□□□□□ -0.58
VPS52-214ENST00000463486 MRPL18Q9H0U6 180 aaKnown RBP11.44□□□□□ -0.58
VPS52-214ENST00000463486 NXT2Q9NPJ8 142 aaKnown RBP11.44□□□□□ -0.58
VPS52-214ENST00000463486 C1orf196B1AJZ1 125 aa11.43□□□□□ -0.58
VPS52-214ENST00000463486 SS18Q15532 418 aa11.43□□□□□ -0.58
VPS52-214ENST00000463486 Q8N1X5 172 aa11.43□□□□□ -0.58
VPS52-214ENST00000463486 GVQW2A0A096LPI5 108 aaPredicted RBP11.42□□□□□ -0.58
VPS52-214ENST00000463486 hDV102S1A0JD36 115 aa11.42□□□□□ -0.58
VPS52-214ENST00000463486 LINC01546A6NGU7 62 aa11.42□□□□□ -0.58
VPS52-214ENST00000463486 HAMPP81172 84 aa11.42□□□□□ -0.58
VPS52-214ENST00000463486 IGLV4-3A0A075B6K6 122 aa11.41□□□□□ -0.58
VPS52-214ENST00000463486 TRAV13-1A0A0B4J241 112 aa11.41□□□□□ -0.58
VPS52-214ENST00000463486 FABP9Q0Z7S8 132 aa11.41□□□□□ -0.58
VPS52-214ENST00000463486 ORMDL2Q53FV1 153 aa11.41□□□□□ -0.58
VPS52-214ENST00000463486 C2orf66Q6UXQ4 117 aa11.41□□□□□ -0.58
VPS52-214ENST00000463486 IGIPA6NJ69 53 aa11.4□□□□□ -0.58
VPS52-214ENST00000463486 CFAP161Q6P656 301 aa11.4□□□□□ -0.58
VPS52-214ENST00000463486 SRRM2Q9UQ35 2752 aaKnown RBP11.39□□□□□ -0.59
VPS52-214ENST00000463486 HIGD2BQ4VC39 106 aa11.39□□□□□ -0.59
VPS52-214ENST00000463486 SDIM1Q6ZPB5 146 aa11.39□□□□□ -0.59
VPS52-214ENST00000463486 CYSLTR1Q9Y271 337 aa11.39□□□□□ -0.59
VPS52-214ENST00000463486 IGHV3OR16-9A0A0B4J2B5 98 aa11.37□□□□□ -0.59
VPS52-214ENST00000463486 LINC00173Q6ZV60 143 aa11.37□□□□□ -0.59
VPS52-214ENST00000463486 TRAPPC1Q9Y5R8 145 aa11.37□□□□□ -0.59
VPS52-214ENST00000463486 IGHV1-58A0A0C4DH39 117 aa11.36□□□□□ -0.59
VPS52-214ENST00000463486 PANO1I0J062 215 aa11.36□□□□□ -0.59
VPS52-214ENST00000463486 ZC2HC1BQ5TFG8 222 aa11.36□□□□□ -0.59
VPS52-214ENST00000463486 CBLN2Q8IUK8 224 aa11.36□□□□□ -0.59
VPS52-214ENST00000463486 PRSS3P2Q8NHM4 247 aa11.36□□□□□ -0.59
VPS52-214ENST00000463486 TOMM6Q96B49 74 aa11.36□□□□□ -0.59
VPS52-214ENST00000463486 URB1-AS1Q96HZ7 61 aa11.36□□□□□ -0.59
VPS52-214ENST00000463486 TMEM141Q96I45 108 aa11.36□□□□□ -0.59
VPS52-214ENST00000463486 AMELXQ99217 191 aa11.36□□□□□ -0.59
VPS52-214ENST00000463486 IFITM10A6NMD0 228 aa11.35□□□□□ -0.59
VPS52-214ENST00000463486 COX7A2LO14548 114 aa11.35□□□□□ -0.59
VPS52-214ENST00000463486 SMR3BP02814 79 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms