RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 C20orf78Q9BR46 151 aa10.52□□□□□ -0.73
COL1A1-202ENST00000463440 CHAC1Q9BUX1 264 aa10.52□□□□□ -0.73
COL1A1-202ENST00000463440 DNAH8Q96JB1 4490 aa10.51□□□□□ -0.73
COL1A1-202ENST00000463440 TRBV24-1A0A075B6N3 115 aa10.51□□□□□ -0.73
COL1A1-202ENST00000463440 MT-ND4LP03901 98 aa10.51□□□□□ -0.73
COL1A1-202ENST00000463440 CNBPP62633 177 aaKnown RBP10.51□□□□□ -0.73
COL1A1-202ENST00000463440 SCXQ7RTU7 201 aa10.51□□□□□ -0.73
COL1A1-202ENST00000463440 ATP5L2Q7Z4Y8 100 aa10.51□□□□□ -0.73
COL1A1-202ENST00000463440 ANAPC16Q96DE5 110 aa10.51□□□□□ -0.73
COL1A1-202ENST00000463440 FAT1Q14517 4588 aa10.51□□□□□ -0.73
COL1A1-202ENST00000463440 RPL32P62910 135 aaKnown RBP10.5□□□□□ -0.73
COL1A1-202ENST00000463440 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.49□□□□□ -0.73
COL1A1-202ENST00000463440 D6R8Y8 96 aa10.49□□□□□ -0.73
COL1A1-202ENST00000463440 TCAPO15273 167 aa10.49□□□□□ -0.73
COL1A1-202ENST00000463440 TNFRSF6BO95407 300 aa10.49□□□□□ -0.73
COL1A1-202ENST00000463440 PPBPP02775 128 aa10.49□□□□□ -0.73
COL1A1-202ENST00000463440 PLA2G1BP04054 148 aaKnown RBP10.49□□□□□ -0.73
COL1A1-202ENST00000463440 LINC00528Q8N1L1 170 aa10.49□□□□□ -0.73
COL1A1-202ENST00000463440 TMEM18Q96B42 140 aa10.49□□□□□ -0.73
COL1A1-202ENST00000463440 CDC42SE2Q9NRR3 84 aa10.49□□□□□ -0.73
COL1A1-202ENST00000463440 LINC00959A0A1B0GUT2 108 aa10.48□□□□□ -0.73
COL1A1-202ENST00000463440 SS18Q15532 418 aa10.48□□□□□ -0.73
COL1A1-202ENST00000463440 ZNF664Q8N3J9 261 aa10.48□□□□□ -0.73
COL1A1-202ENST00000463440 CIRBP-AS1Q8TBR5 109 aa10.48□□□□□ -0.73
COL1A1-202ENST00000463440 CSDC2Q9Y534 153 aaKnown RBP10.48□□□□□ -0.73
COL1A1-202ENST00000463440 PHOX2AO14813 284 aa10.47□□□□□ -0.73
COL1A1-202ENST00000463440 CCL25O15444 150 aa10.47□□□□□ -0.73
COL1A1-202ENST00000463440 XCL1P47992 114 aa10.47□□□□□ -0.73
COL1A1-202ENST00000463440 FOXI1Q12951 378 aa10.47□□□□□ -0.73
COL1A1-202ENST00000463440 C15orf56Q8N910 161 aa10.47□□□□□ -0.73
COL1A1-202ENST00000463440 SMIM2Q9BVW6 85 aa10.47□□□□□ -0.73
COL1A1-202ENST00000463440 IGHV3-64A0A075B6Q5 118 aa10.46□□□□□ -0.73
COL1A1-202ENST00000463440 IFITM2Q01629 132 aa10.46□□□□□ -0.73
COL1A1-202ENST00000463440 UQCC3Q6UW78 93 aa10.46□□□□□ -0.73
COL1A1-202ENST00000463440 SDIM1Q6ZPB5 146 aa10.46□□□□□ -0.73
COL1A1-202ENST00000463440 ORMDL3Q8N138 153 aa10.46□□□□□ -0.73
COL1A1-202ENST00000463440 UBE2D4Q9Y2X8 147 aa10.46□□□□□ -0.73
COL1A1-202ENST00000463440 NPYP01303 97 aa10.45□□□□□ -0.74
COL1A1-202ENST00000463440 HIGD2BQ4VC39 106 aa10.45□□□□□ -0.74
COL1A1-202ENST00000463440 TIMM21Q9BVV7 248 aa10.45□□□□□ -0.74
COL1A1-202ENST00000463440 SLPIP03973 132 aa10.44□□□□□ -0.74
COL1A1-202ENST00000463440 CD164L2Q6UWJ8 174 aa10.44□□□□□ -0.74
COL1A1-202ENST00000463440 TMEM136Q6ZRR5 245 aa10.44□□□□□ -0.74
COL1A1-202ENST00000463440 PRELID3AQ96N28 172 aa10.44□□□□□ -0.74
COL1A1-202ENST00000463440 VPS13BQ7Z7G8 4022 aa10.44□□□□□ -0.74
COL1A1-202ENST00000463440 GVQW2A0A096LPI5 108 aaPredicted RBP10.43□□□□□ -0.74
COL1A1-202ENST00000463440 C1orf196B1AJZ1 125 aa10.43□□□□□ -0.74
COL1A1-202ENST00000463440 SRRM2Q9UQ35 2752 aaKnown RBP10.43□□□□□ -0.74
COL1A1-202ENST00000463440 IGHV1-58A0A0C4DH39 117 aa10.42□□□□□ -0.74
COL1A1-202ENST00000463440 TMEM218A2RU14 115 aa10.42□□□□□ -0.74
COL1A1-202ENST00000463440 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.42□□□□□ -0.74
COL1A1-202ENST00000463440 RAB5AP20339 215 aa10.41□□□□□ -0.74
COL1A1-202ENST00000463440 RNASE13Q5GAN3 156 aaKnown RBP10.41□□□□□ -0.74
COL1A1-202ENST00000463440 Q6ZUT4 128 aa10.41□□□□□ -0.74
COL1A1-202ENST00000463440 LAMTOR2Q9Y2Q5 125 aa10.41□□□□□ -0.74
COL1A1-202ENST00000463440 TRAV13-1A0A0B4J241 112 aa10.4□□□□□ -0.74
COL1A1-202ENST00000463440 ADCYAP1P18509 176 aa10.4□□□□□ -0.74
COL1A1-202ENST00000463440 RPL39P62891 51 aaKnown RBP10.4□□□□□ -0.74
COL1A1-202ENST00000463440 DPH3Q96FX2 82 aa10.4□□□□□ -0.74
COL1A1-202ENST00000463440 IMMP2LQ96T52 175 aa10.4□□□□□ -0.74
COL1A1-202ENST00000463440 SPANXA1Q9NS26 97 aa10.4□□□□□ -0.74
COL1A1-202ENST00000463440 PANO1I0J062 215 aa10.39□□□□□ -0.75
COL1A1-202ENST00000463440 CIRBPQ14011 172 aaKnown RBP10.39□□□□□ -0.75
COL1A1-202ENST00000463440 CTDSP1Q9GZU7 261 aa10.39□□□□□ -0.75
COL1A1-202ENST00000463440 MAP1LC3AQ9H492 121 aa10.39□□□□□ -0.75
COL1A1-202ENST00000463440 PRSS47A8MTI9 375 aa10.38□□□□□ -0.75
COL1A1-202ENST00000463440 COX7A2LO14548 114 aa10.38□□□□□ -0.75
COL1A1-202ENST00000463440 MALP21145 153 aa10.38□□□□□ -0.75
COL1A1-202ENST00000463440 SEC11CQ9BY50 192 aa10.38□□□□□ -0.75
COL1A1-202ENST00000463440 FLG2Q5D862 2391 aaPredicted RBP10.37□□□□□ -0.75
COL1A1-202ENST00000463440 ZNF561-AS1K7EIQ3 104 aa10.37□□□□□ -0.75
COL1A1-202ENST00000463440 MRPS36P82909 103 aaKnown RBP10.37□□□□□ -0.75
COL1A1-202ENST00000463440 COMMD7Q86VX2 200 aa10.37□□□□□ -0.75
COL1A1-202ENST00000463440 LOC389332A0A1B0GUA5 103 aa10.36□□□□□ -0.75
COL1A1-202ENST00000463440 COX6A2Q02221 97 aa10.36□□□□□ -0.75
COL1A1-202ENST00000463440 SPACA4Q8TDM5 124 aa10.36□□□□□ -0.75
COL1A1-202ENST00000463440 PKIGQ9Y2B9 76 aa10.36□□□□□ -0.75
COL1A1-202ENST00000463440 TRAV9-1A0A075B6T8 112 aa10.35□□□□□ -0.75
COL1A1-202ENST00000463440 CHTF8P0CG12 524 aa10.35□□□□□ -0.75
COL1A1-202ENST00000463440 IFI27P40305 119 aaPredicted RBP10.35□□□□□ -0.75
COL1A1-202ENST00000463440 RPL37AP61513 92 aaKnown RBP10.35□□□□□ -0.75
COL1A1-202ENST00000463440 CARD19Q96LW7 228 aa10.35□□□□□ -0.75
COL1A1-202ENST00000463440 A0A087WYN8 130 aa10.34□□□□□ -0.75
COL1A1-202ENST00000463440 APOMO95445 188 aa10.34□□□□□ -0.75
COL1A1-202ENST00000463440 C5orf38Q86SI9 138 aa10.34□□□□□ -0.75
COL1A1-202ENST00000463440 Q8N8P6 123 aa10.34□□□□□ -0.75
COL1A1-202ENST00000463440 PRSS3P2Q8NHM4 247 aa10.34□□□□□ -0.75
COL1A1-202ENST00000463440 FAM104AQ969W3 186 aa10.34□□□□□ -0.75
COL1A1-202ENST00000463440 LINC00526Q96FQ7 95 aa10.34□□□□□ -0.75
COL1A1-202ENST00000463440 OPRPNQ99935 248 aaPredicted RBP10.34□□□□□ -0.75
COL1A1-202ENST00000463440 IFITM10A6NMD0 228 aa10.33□□□□□ -0.76
COL1A1-202ENST00000463440 S100PP25815 95 aa10.33□□□□□ -0.76
COL1A1-202ENST00000463440 KRTAP10-4P60372 401 aaPredicted RBP10.33□□□□□ -0.76
COL1A1-202ENST00000463440 SYCNQ0VAF6 134 aa10.33□□□□□ -0.76
COL1A1-202ENST00000463440 PYGO1Q9Y3Y4 419 aa10.33□□□□□ -0.76
COL1A1-202ENST00000463440 IGKV2-24A0A0C4DH68 120 aa10.32□□□□□ -0.76
COL1A1-202ENST00000463440 MAJINQ3KP22 176 aa10.32□□□□□ -0.76
COL1A1-202ENST00000463440 NXT2Q9NPJ8 142 aaKnown RBP10.32□□□□□ -0.76
COL1A1-202ENST00000463440 IGLV4-69A0A075B6H9 119 aa10.31□□□□□ -0.76
COL1A1-202ENST00000463440 K7EMI3 77 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms