RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 FAM104BQ5XKR9 115 aa8.5□□□□□ -1.05
HDAC1-203ENST00000463172 CHCHD10Q8WYQ3 142 aaPredicted RBP8.5□□□□□ -1.05
HDAC1-203ENST00000463172 DMBT1Q9UGM3 2413 aaPredicted RBP8.49□□□□□ -1.05
HDAC1-203ENST00000463172 IGHV3-64A0A075B6Q5 118 aa8.49□□□□□ -1.05
HDAC1-203ENST00000463172 ESDP10768 282 aa8.49□□□□□ -1.05
HDAC1-203ENST00000463172 RPS10P46783 165 aaKnown RBP8.49□□□□□ -1.05
HDAC1-203ENST00000463172 PNRC1Q12796 327 aaPredicted RBP8.49□□□□□ -1.05
HDAC1-203ENST00000463172 SS18Q15532 418 aa8.49□□□□□ -1.05
HDAC1-203ENST00000463172 MRPL52Q86TS9 123 aaKnown RBP8.49□□□□□ -1.05
HDAC1-203ENST00000463172 C20orf78Q9BR46 151 aa8.49□□□□□ -1.05
HDAC1-203ENST00000463172 SMKR1H3BMG3 65 aa8.48□□□□□ -1.05
HDAC1-203ENST00000463172 CIRBP-AS1Q8TBR5 109 aa8.48□□□□□ -1.05
HDAC1-203ENST00000463172 PKIGQ9Y2B9 76 aa8.48□□□□□ -1.05
HDAC1-203ENST00000463172 CCL25O15444 150 aa8.47□□□□□ -1.05
HDAC1-203ENST00000463172 GAS8-AS1O95177 125 aa8.47□□□□□ -1.05
HDAC1-203ENST00000463172 PPBPP02775 128 aa8.47□□□□□ -1.05
HDAC1-203ENST00000463172 MRPL51Q4U2R6 128 aaKnown RBP8.47□□□□□ -1.05
HDAC1-203ENST00000463172 MRPL54Q6P161 138 aaKnown RBP8.47□□□□□ -1.05
HDAC1-203ENST00000463172 ATP5L2Q7Z4Y8 100 aa8.47□□□□□ -1.05
HDAC1-203ENST00000463172 NRACQ8N912 160 aa8.47□□□□□ -1.05
HDAC1-203ENST00000463172 FLG2Q5D862 2391 aaPredicted RBP8.46□□□□□ -1.06
HDAC1-203ENST00000463172 MT-ND4LP03901 98 aa8.46□□□□□ -1.06
HDAC1-203ENST00000463172 ZNF664Q8N3J9 261 aa8.46□□□□□ -1.06
HDAC1-203ENST00000463172 DPH3Q96FX2 82 aa8.46□□□□□ -1.06
HDAC1-203ENST00000463172 CDC42SE2Q9NRR3 84 aa8.46□□□□□ -1.06
HDAC1-203ENST00000463172 CSDC2Q9Y534 153 aaKnown RBP8.46□□□□□ -1.06
HDAC1-203ENST00000463172 TRBV24-1A0A075B6N3 115 aa8.45□□□□□ -1.06
HDAC1-203ENST00000463172 LINC00959A0A1B0GUT2 108 aa8.45□□□□□ -1.06
HDAC1-203ENST00000463172 PHOX2AO14813 284 aa8.45□□□□□ -1.06
HDAC1-203ENST00000463172 XCL1P47992 114 aa8.45□□□□□ -1.06
HDAC1-203ENST00000463172 RPL32P62910 135 aaKnown RBP8.45□□□□□ -1.06
HDAC1-203ENST00000463172 SDIM1Q6ZPB5 146 aa8.45□□□□□ -1.06
HDAC1-203ENST00000463172 ANAPC16Q96DE5 110 aa8.45□□□□□ -1.06
HDAC1-203ENST00000463172 IGHV1-58A0A0C4DH39 117 aa8.44□□□□□ -1.06
HDAC1-203ENST00000463172 C1orf196B1AJZ1 125 aa8.44□□□□□ -1.06
HDAC1-203ENST00000463172 D6R8Y8 96 aa8.44□□□□□ -1.06
HDAC1-203ENST00000463172 TNFRSF6BO95407 300 aa8.44□□□□□ -1.06
HDAC1-203ENST00000463172 FOXI1Q12951 378 aa8.44□□□□□ -1.06
HDAC1-203ENST00000463172 C15orf56Q8N910 161 aa8.44□□□□□ -1.06
HDAC1-203ENST00000463172 GVQW2A0A096LPI5 108 aaPredicted RBP8.43□□□□□ -1.06
HDAC1-203ENST00000463172 A0A1B0GXF2 115 aa8.43□□□□□ -1.06
HDAC1-203ENST00000463172 HIGD2BQ4VC39 106 aa8.43□□□□□ -1.06
HDAC1-203ENST00000463172 CD164L2Q6UWJ8 174 aa8.43□□□□□ -1.06
HDAC1-203ENST00000463172 ORMDL3Q8N138 153 aa8.43□□□□□ -1.06
HDAC1-203ENST00000463172 TIMM21Q9BVV7 248 aa8.43□□□□□ -1.06
HDAC1-203ENST00000463172 SMIM2Q9BVW6 85 aa8.43□□□□□ -1.06
HDAC1-203ENST00000463172 RAB5AP20339 215 aa8.42□□□□□ -1.06
HDAC1-203ENST00000463172 MALP21145 153 aa8.42□□□□□ -1.06
HDAC1-203ENST00000463172 CLLU1Q5K131 121 aa8.42□□□□□ -1.06
HDAC1-203ENST00000463172 UBE2D4Q9Y2X8 147 aa8.42□□□□□ -1.06
HDAC1-203ENST00000463172 J3QL48 77 aa8.41□□□□□ -1.06
HDAC1-203ENST00000463172 ZNF561-AS1K7EIQ3 104 aa8.41□□□□□ -1.06
HDAC1-203ENST00000463172 RPL37AP61513 92 aaKnown RBP8.41□□□□□ -1.06
HDAC1-203ENST00000463172 TMEM136Q6ZRR5 245 aa8.41□□□□□ -1.06
HDAC1-203ENST00000463172 LAMTOR2Q9Y2Q5 125 aa8.41□□□□□ -1.06
HDAC1-203ENST00000463172 MYCBP2O75592 4640 aa8.41□□□□□ -1.06
HDAC1-203ENST00000463172 COX7A2LO14548 114 aa8.4□□□□□ -1.06
HDAC1-203ENST00000463172 APOMO95445 188 aa8.4□□□□□ -1.06
HDAC1-203ENST00000463172 UQCC3Q6UW78 93 aa8.4□□□□□ -1.06
HDAC1-203ENST00000463172 PRELID3AQ96N28 172 aa8.4□□□□□ -1.06
HDAC1-203ENST00000463172 SPANXA1Q9NS26 97 aa8.4□□□□□ -1.06
HDAC1-203ENST00000463172 LINC00474Q9P2X8 69 aa8.4□□□□□ -1.06
HDAC1-203ENST00000463172 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.4□□□□□ -1.06
HDAC1-203ENST00000463172 TRAV13-1A0A0B4J241 112 aa8.39□□□□□ -1.07
HDAC1-203ENST00000463172 NPYP01303 97 aa8.39□□□□□ -1.07
HDAC1-203ENST00000463172 SLPIP03973 132 aa8.39□□□□□ -1.07
HDAC1-203ENST00000463172 CIRBPQ14011 172 aaKnown RBP8.39□□□□□ -1.07
HDAC1-203ENST00000463172 COX6A2Q02221 97 aa8.38□□□□□ -1.07
HDAC1-203ENST00000463172 SPACA4Q8TDM5 124 aa8.38□□□□□ -1.07
HDAC1-203ENST00000463172 CARD19Q96LW7 228 aa8.38□□□□□ -1.07
HDAC1-203ENST00000463172 IFI27P40305 119 aaPredicted RBP8.37□□□□□ -1.07
HDAC1-203ENST00000463172 Q6ZUT4 128 aa8.37□□□□□ -1.07
HDAC1-203ENST00000463172 C7orf33Q8WU49 177 aa8.37□□□□□ -1.07
HDAC1-203ENST00000463172 IMMP2LQ96T52 175 aa8.37□□□□□ -1.07
HDAC1-203ENST00000463172 MAP1LC3AQ9H492 121 aa8.37□□□□□ -1.07
HDAC1-203ENST00000463172 HERC1Q15751 4861 aa8.37□□□□□ -1.07
HDAC1-203ENST00000463172 MRPS36P82909 103 aaKnown RBP8.36□□□□□ -1.07
HDAC1-203ENST00000463172 SYCNQ0VAF6 134 aa8.36□□□□□ -1.07
HDAC1-203ENST00000463172 MAJINQ3KP22 176 aa8.36□□□□□ -1.07
HDAC1-203ENST00000463172 RNASE13Q5GAN3 156 aaKnown RBP8.36□□□□□ -1.07
HDAC1-203ENST00000463172 CTDSP1Q9GZU7 261 aa8.36□□□□□ -1.07
HDAC1-203ENST00000463172 A0A087WYN8 130 aa8.35□□□□□ -1.07
HDAC1-203ENST00000463172 IGKV2-24A0A0C4DH68 120 aa8.35□□□□□ -1.07
HDAC1-203ENST00000463172 PANO1I0J062 215 aa8.35□□□□□ -1.07
HDAC1-203ENST00000463172 CHTF8P0CG12 524 aa8.35□□□□□ -1.07
HDAC1-203ENST00000463172 RPL39P62891 51 aaKnown RBP8.35□□□□□ -1.07
HDAC1-203ENST00000463172 IFITM10A6NMD0 228 aa8.34□□□□□ -1.07
HDAC1-203ENST00000463172 PRSS47A8MTI9 375 aa8.34□□□□□ -1.07
HDAC1-203ENST00000463172 KRTAP29-1A8MX34 341 aaPredicted RBP8.34□□□□□ -1.07
HDAC1-203ENST00000463172 K7EMI3 77 aa8.34□□□□□ -1.07
HDAC1-203ENST00000463172 G0S2P27469 103 aa8.34□□□□□ -1.07
HDAC1-203ENST00000463172 PRSS3P2Q8NHM4 247 aa8.34□□□□□ -1.07
HDAC1-203ENST00000463172 CAMK2N2Q96S95 79 aa8.34□□□□□ -1.07
HDAC1-203ENST00000463172 PLAC8Q9NZF1 115 aa8.34□□□□□ -1.07
HDAC1-203ENST00000463172 IGLV4-69A0A075B6H9 119 aa8.33□□□□□ -1.08
HDAC1-203ENST00000463172 TRAV9-1A0A075B6T8 112 aa8.33□□□□□ -1.08
HDAC1-203ENST00000463172 LOC389332A0A1B0GUA5 103 aa8.33□□□□□ -1.08
HDAC1-203ENST00000463172 TMEM218A2RU14 115 aa8.33□□□□□ -1.08
HDAC1-203ENST00000463172 S100PP25815 95 aa8.33□□□□□ -1.08
HDAC1-203ENST00000463172 ORMDL2Q53FV1 153 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms