RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 NCR2O95944 276 aa4.53□□□□□ -1.68
SMC3-202ENST00000462899 ZNF25P17030 456 aaPredicted RBP4.53□□□□□ -1.68
SMC3-202ENST00000462899 IFITM3Q01628 133 aa4.53□□□□□ -1.68
SMC3-202ENST00000462899 CD164L2Q6UWJ8 174 aa4.53□□□□□ -1.68
SMC3-202ENST00000462899 KRTAP7-1Q8IUC3 87 aa4.53□□□□□ -1.68
SMC3-202ENST00000462899 ENKURQ8TC29 256 aa4.53□□□□□ -1.68
SMC3-202ENST00000462899 MAP1LC3B2A6NCE7 125 aa4.52□□□□□ -1.69
SMC3-202ENST00000462899 S100A9P06702 114 aaKnown RBP4.52□□□□□ -1.69
SMC3-202ENST00000462899 UBE2D1P51668 147 aa4.52□□□□□ -1.69
SMC3-202ENST00000462899 TPRXLQ17RH7 258 aa4.52□□□□□ -1.69
SMC3-202ENST00000462899 AMMECR1LQ6DCA0 310 aa4.52□□□□□ -1.69
SMC3-202ENST00000462899 RPL7L1Q6DKI1 246 aaKnown RBP4.52□□□□□ -1.69
SMC3-202ENST00000462899 GATD1Q8NB37 220 aa4.52□□□□□ -1.69
SMC3-202ENST00000462899 ISOC2Q96AB3 205 aa4.52□□□□□ -1.69
SMC3-202ENST00000462899 MAP1LC3BQ9GZQ8 125 aa4.52□□□□□ -1.69
SMC3-202ENST00000462899 FAM168BA1KXE4 195 aa4.51□□□□□ -1.69
SMC3-202ENST00000462899 C19orf71A6NCJ1 209 aa4.51□□□□□ -1.69
SMC3-202ENST00000462899 ESDP10768 282 aa4.51□□□□□ -1.69
SMC3-202ENST00000462899 RNASEKQ6P5S7 137 aaKnown RBP4.51□□□□□ -1.69
SMC3-202ENST00000462899 BAGE2Q86Y30 109 aa4.51□□□□□ -1.69
SMC3-202ENST00000462899 STOML3Q8TAV4 291 aa4.51□□□□□ -1.69
SMC3-202ENST00000462899 C2orf48Q96LS8 159 aa4.51□□□□□ -1.69
SMC3-202ENST00000462899 CNFNQ9BYD5 112 aa4.51□□□□□ -1.69
SMC3-202ENST00000462899 A0A087WZ39 114 aa4.5□□□□□ -1.69
SMC3-202ENST00000462899 A0A087X002 238 aa4.5□□□□□ -1.69
SMC3-202ENST00000462899 BCL2L11O43521 198 aa4.5□□□□□ -1.69
SMC3-202ENST00000462899 SSNA1O43805 119 aa4.5□□□□□ -1.69
SMC3-202ENST00000462899 PAGE4O60829 102 aa4.5□□□□□ -1.69
SMC3-202ENST00000462899 TSPAN13O95857 204 aa4.5□□□□□ -1.69
SMC3-202ENST00000462899 APCSP02743 223 aa4.5□□□□□ -1.69
SMC3-202ENST00000462899 TRGC1P0CF51 173 aa4.5□□□□□ -1.69
SMC3-202ENST00000462899 CTRLP40313 264 aa4.5□□□□□ -1.69
SMC3-202ENST00000462899 EIF5AP63241 154 aaKnown RBP4.5□□□□□ -1.69
SMC3-202ENST00000462899 RPL18AQ02543 176 aaKnown RBP4.5□□□□□ -1.69
SMC3-202ENST00000462899 CST9LP1Q5W188 147 aa4.5□□□□□ -1.69
SMC3-202ENST00000462899 LINC00299Q6ZSB3 139 aa4.5□□□□□ -1.69
SMC3-202ENST00000462899 MRPL52Q86TS9 123 aaKnown RBP4.5□□□□□ -1.69
SMC3-202ENST00000462899 TSKUQ8WUA8 353 aa4.5□□□□□ -1.69
SMC3-202ENST00000462899 CAMK2N2Q96S95 79 aa4.5□□□□□ -1.69
SMC3-202ENST00000462899 CDC42SE2Q9NRR3 84 aa4.5□□□□□ -1.69
SMC3-202ENST00000462899 G3V3Q6 166 aa4.49□□□□□ -1.69
SMC3-202ENST00000462899 UPK1BO75841 260 aa4.49□□□□□ -1.69
SMC3-202ENST00000462899 TLX1NBP0CAT3 122 aa4.49□□□□□ -1.69
SMC3-202ENST00000462899 Q5BKY6 102 aa4.49□□□□□ -1.69
SMC3-202ENST00000462899 RPL39LQ96EH5 51 aaKnown RBP4.49□□□□□ -1.69
SMC3-202ENST00000462899 OPRPNQ99935 248 aaPredicted RBP4.49□□□□□ -1.69
SMC3-202ENST00000462899 SDHAF1A6NFY7 115 aa4.48□□□□□ -1.69
SMC3-202ENST00000462899 F2Z2F3 143 aa4.48□□□□□ -1.69
SMC3-202ENST00000462899 RPL35P42766 123 aaKnown RBP4.48□□□□□ -1.69
SMC3-202ENST00000462899 SS18Q15532 418 aa4.48□□□□□ -1.69
SMC3-202ENST00000462899 AKR1C8PQ5T2L2 129 aa4.48□□□□□ -1.69
SMC3-202ENST00000462899 EIF5AL1Q6IS14 154 aaKnown RBP4.48□□□□□ -1.69
SMC3-202ENST00000462899 LYZL1Q6UWQ5 148 aa4.48□□□□□ -1.69
SMC3-202ENST00000462899 TPPP3Q9BW30 176 aa4.48□□□□□ -1.69
SMC3-202ENST00000462899 MRPL35Q9NZE8 188 aaKnown RBP4.48□□□□□ -1.69
SMC3-202ENST00000462899 TRBV6-5A0A0K0K1A5 114 aa4.47□□□□□ -1.69
SMC3-202ENST00000462899 COX7A2LO14548 114 aa4.47□□□□□ -1.69
SMC3-202ENST00000462899 ZNF861PO60384 105 aa4.47□□□□□ -1.69
SMC3-202ENST00000462899 TSHBP01222 138 aa4.47□□□□□ -1.69
SMC3-202ENST00000462899 RPS20P60866 119 aaKnown RBP4.47□□□□□ -1.69
SMC3-202ENST00000462899 TMUB2Q71RG4 321 aa4.47□□□□□ -1.69
SMC3-202ENST00000462899 FAM19A5Q7Z5A7 132 aaPredicted RBP4.47□□□□□ -1.69
SMC3-202ENST00000462899 C9orf62Q8N4C0 152 aa4.47□□□□□ -1.69
SMC3-202ENST00000462899 OR2D3Q8NGH3 330 aa4.47□□□□□ -1.69
SMC3-202ENST00000462899 C11orf52Q96A22 123 aa4.47□□□□□ -1.69
SMC3-202ENST00000462899 RETNLBQ9BQ08 111 aa4.47□□□□□ -1.69
SMC3-202ENST00000462899 KRTAP4-1Q9BYQ7 146 aa4.47□□□□□ -1.69
SMC3-202ENST00000462899 BORCS7-ASMTA0A0B4J1R7 106 aa4.46□□□□□ -1.7
SMC3-202ENST00000462899 I3L3M4 83 aa4.46□□□□□ -1.7
SMC3-202ENST00000462899 NPSP0C0P6 89 aa4.46□□□□□ -1.7
SMC3-202ENST00000462899 SPAG11BQ08648 103 aa4.46□□□□□ -1.7
SMC3-202ENST00000462899 C10orf25Q5T742 122 aa4.46□□□□□ -1.7
SMC3-202ENST00000462899 MBD3L1Q8WWY6 194 aa4.46□□□□□ -1.7
SMC3-202ENST00000462899 TMEM101Q96IK0 257 aa4.46□□□□□ -1.7
SMC3-202ENST00000462899 BTF3L4Q96K17 158 aa4.46□□□□□ -1.7
SMC3-202ENST00000462899 SMDT1Q9H4I9 107 aa4.46□□□□□ -1.7
SMC3-202ENST00000462899 CYTL1Q9NRR1 136 aa4.46□□□□□ -1.7
SMC3-202ENST00000462899 C1orf196B1AJZ1 125 aa4.45□□□□□ -1.7
SMC3-202ENST00000462899 M0QXV9 152 aa4.45□□□□□ -1.7
SMC3-202ENST00000462899 FOXA3P55318 350 aaPredicted RBP4.45□□□□□ -1.7
SMC3-202ENST00000462899 KRTAP13-2Q52LG2 175 aa4.45□□□□□ -1.7
SMC3-202ENST00000462899 CENPWQ5EE01 88 aa4.45□□□□□ -1.7
SMC3-202ENST00000462899 OR10D4PQ8NGN7 298 aa4.45□□□□□ -1.7
SMC3-202ENST00000462899 S100ZQ8WXG8 99 aa4.45□□□□□ -1.7
SMC3-202ENST00000462899 SMIM12Q96EX1 92 aa4.45□□□□□ -1.7
SMC3-202ENST00000462899 MRAP2Q96G30 205 aa4.45□□□□□ -1.7
SMC3-202ENST00000462899 FAM210AQ96ND0 272 aa4.45□□□□□ -1.7
SMC3-202ENST00000462899 RNASE7Q9H1E1 156 aaKnown RBP4.45□□□□□ -1.7
SMC3-202ENST00000462899 C6orf48Q9UBA6 75 aa4.45□□□□□ -1.7
SMC3-202ENST00000462899 CSDC2Q9Y534 153 aaKnown RBP4.45□□□□□ -1.7
SMC3-202ENST00000462899 TRBV20OR9-2A0A075B6H5 130 aa4.44□□□□□ -1.7
SMC3-202ENST00000462899 F8WDY8 70 aa4.44□□□□□ -1.7
SMC3-202ENST00000462899 PFDN1O60925 122 aa4.44□□□□□ -1.7
SMC3-202ENST00000462899 POLR2KP53803 58 aaKnown RBP4.44□□□□□ -1.7
SMC3-202ENST00000462899 LINC01547P58512 204 aaPredicted RBP4.44□□□□□ -1.7
SMC3-202ENST00000462899 DEFA1P59665 94 aa4.44□□□□□ -1.7
SMC3-202ENST00000462899 IMMP2LQ96T52 175 aa4.44□□□□□ -1.7
SMC3-202ENST00000462899 TMEM242Q9NWH2 141 aa4.44□□□□□ -1.7
SMC3-202ENST00000462899 ALG5Q9Y673 324 aa4.44□□□□□ -1.7
SMC3-202ENST00000462899 FLGP20930 4061 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms