RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 RMI2Q96E14 147 aa5.15□□□□□ -1.59
CDC42BPA-210ENST00000462553 MRAP2Q96G30 205 aa5.15□□□□□ -1.59
CDC42BPA-210ENST00000462553 CHAC1Q9BUX1 264 aa5.15□□□□□ -1.59
CDC42BPA-210ENST00000462553 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.14□□□□□ -1.59
CDC42BPA-210ENST00000462553 IGKV2-29A2NJV5 120 aaPredicted RBP5.14□□□□□ -1.59
CDC42BPA-210ENST00000462553 OXTP01178 125 aa5.14□□□□□ -1.59
CDC42BPA-210ENST00000462553 CRPP02741 224 aa5.14□□□□□ -1.59
CDC42BPA-210ENST00000462553 APCSP02743 223 aa5.14□□□□□ -1.59
CDC42BPA-210ENST00000462553 ESDP10768 282 aa5.14□□□□□ -1.59
CDC42BPA-210ENST00000462553 HNRNPA3P51991 378 aaKnown RBP5.14□□□□□ -1.59
CDC42BPA-210ENST00000462553 PNRC1Q12796 327 aaPredicted RBP5.14□□□□□ -1.59
CDC42BPA-210ENST00000462553 MIAQ16674 131 aa5.14□□□□□ -1.59
CDC42BPA-210ENST00000462553 MRPL54Q6P161 138 aaKnown RBP5.14□□□□□ -1.59
CDC42BPA-210ENST00000462553 LINC00269Q8N2A0 174 aa5.14□□□□□ -1.59
CDC42BPA-210ENST00000462553 C1orf43Q9BWL3 253 aa5.14□□□□□ -1.59
CDC42BPA-210ENST00000462553 TMEM242Q9NWH2 141 aa5.14□□□□□ -1.59
CDC42BPA-210ENST00000462553 COX11Q9Y6N1 276 aa5.14□□□□□ -1.59
CDC42BPA-210ENST00000462553 TRBV27A0A0K0K1C4 114 aa5.13□□□□□ -1.59
CDC42BPA-210ENST00000462553 A0A1B0GW15 77 aa5.13□□□□□ -1.59
CDC42BPA-210ENST00000462553 I3L3M4 83 aa5.13□□□□□ -1.59
CDC42BPA-210ENST00000462553 CAMPP49913 170 aa5.13□□□□□ -1.59
CDC42BPA-210ENST00000462553 HBBP68871 147 aa5.13□□□□□ -1.59
CDC42BPA-210ENST00000462553 REG3AQ06141 175 aa5.13□□□□□ -1.59
CDC42BPA-210ENST00000462553 ST20Q9HBF5 79 aa5.13□□□□□ -1.59
CDC42BPA-210ENST00000462553 TMEM218A2RU14 115 aa5.12□□□□□ -1.59
CDC42BPA-210ENST00000462553 UBE2L6O14933 153 aa5.12□□□□□ -1.59
CDC42BPA-210ENST00000462553 PPP1R2P9O14990 202 aa5.12□□□□□ -1.59
CDC42BPA-210ENST00000462553 PMCHP20382 165 aa5.12□□□□□ -1.59
CDC42BPA-210ENST00000462553 UQCC3Q6UW78 93 aa5.12□□□□□ -1.59
CDC42BPA-210ENST00000462553 ATP5L2Q7Z4Y8 100 aa5.12□□□□□ -1.59
CDC42BPA-210ENST00000462553 PLA2G2DQ9UNK4 145 aa5.12□□□□□ -1.59
CDC42BPA-210ENST00000462553 IGLV10-54A0A075B6I4 117 aa5.11□□□□□ -1.59
CDC42BPA-210ENST00000462553 TRBV24-1A0A075B6N3 115 aa5.11□□□□□ -1.59
CDC42BPA-210ENST00000462553 LINC00862A6NCI5 91 aa5.11□□□□□ -1.59
CDC42BPA-210ENST00000462553 USP17L23D6RBM5 183 aa5.11□□□□□ -1.59
CDC42BPA-210ENST00000462553 H7C423 109 aa5.11□□□□□ -1.59
CDC42BPA-210ENST00000462553 HLA-DQA1P01909 254 aa5.11□□□□□ -1.59
CDC42BPA-210ENST00000462553 FGF6P10767 208 aa5.11□□□□□ -1.59
CDC42BPA-210ENST00000462553 SUMO2P61956 95 aaKnown RBP5.11□□□□□ -1.59
CDC42BPA-210ENST00000462553 COMMD7Q86VX2 200 aa5.11□□□□□ -1.59
CDC42BPA-210ENST00000462553 ANAPC16Q96DE5 110 aa5.11□□□□□ -1.59
CDC42BPA-210ENST00000462553 D6R8Y8 96 aa5.1□□□□□ -1.59
CDC42BPA-210ENST00000462553 NPYP01303 97 aa5.1□□□□□ -1.59
CDC42BPA-210ENST00000462553 MT-ND4LP03901 98 aa5.1□□□□□ -1.59
CDC42BPA-210ENST00000462553 MT1HL1P0DM35 61 aa5.1□□□□□ -1.59
CDC42BPA-210ENST00000462553 RPL32P62910 135 aaKnown RBP5.1□□□□□ -1.59
CDC42BPA-210ENST00000462553 C10orf91Q5T1B1 145 aa5.1□□□□□ -1.59
CDC42BPA-210ENST00000462553 LCE5AQ5TCM9 118 aa5.1□□□□□ -1.59
CDC42BPA-210ENST00000462553 MRPL52Q86TS9 123 aaKnown RBP5.1□□□□□ -1.59
CDC42BPA-210ENST00000462553 TRAV8-4A0A0B4J246 113 aa5.09□□□□□ -1.59
CDC42BPA-210ENST00000462553 C7orf77A4D0Y5 90 aa5.09□□□□□ -1.59
CDC42BPA-210ENST00000462553 F8W036 122 aa5.09□□□□□ -1.59
CDC42BPA-210ENST00000462553 VCYO14598 125 aa5.09□□□□□ -1.59
CDC42BPA-210ENST00000462553 TNFRSF6BO95407 300 aa5.09□□□□□ -1.59
CDC42BPA-210ENST00000462553 PPP1R17O96001 155 aa5.09□□□□□ -1.59
CDC42BPA-210ENST00000462553 S100A8P05109 93 aa5.09□□□□□ -1.59
CDC42BPA-210ENST00000462553 PRSS1P07477 247 aa5.09□□□□□ -1.59
CDC42BPA-210ENST00000462553 ZNF25P17030 456 aaPredicted RBP5.09□□□□□ -1.59
CDC42BPA-210ENST00000462553 CKS2P33552 79 aa5.09□□□□□ -1.59
CDC42BPA-210ENST00000462553 RPL37AP61513 92 aaKnown RBP5.09□□□□□ -1.59
CDC42BPA-210ENST00000462553 RNASEKQ6P5S7 137 aaKnown RBP5.09□□□□□ -1.59
CDC42BPA-210ENST00000462553 C15orf56Q8N910 161 aa5.09□□□□□ -1.59
CDC42BPA-210ENST00000462553 C20orf78Q9BR46 151 aa5.09□□□□□ -1.59
CDC42BPA-210ENST00000462553 SMIM2Q9BVW6 85 aa5.09□□□□□ -1.59
CDC42BPA-210ENST00000462553 SEC11CQ9BY50 192 aa5.09□□□□□ -1.59
CDC42BPA-210ENST00000462553 PANO1I0J062 215 aa5.08□□□□□ -1.6
CDC42BPA-210ENST00000462553 PHOX2AO14813 284 aa5.08□□□□□ -1.6
CDC42BPA-210ENST00000462553 C14orf177Q52M58 125 aa5.08□□□□□ -1.6
CDC42BPA-210ENST00000462553 AMMECR1LQ6DCA0 310 aa5.08□□□□□ -1.6
CDC42BPA-210ENST00000462553 OR5A1Q8NGJ0 315 aa5.08□□□□□ -1.6
CDC42BPA-210ENST00000462553 FAM104AQ969W3 186 aa5.08□□□□□ -1.6
CDC42BPA-210ENST00000462553 CDC42SE2Q9NRR3 84 aa5.08□□□□□ -1.6
CDC42BPA-210ENST00000462553 UBE2D4Q9Y2X8 147 aa5.08□□□□□ -1.6
CDC42BPA-210ENST00000462553 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.08□□□□□ -1.6
CDC42BPA-210ENST00000462553 IGKV3OR2-268A0A0C4DH90 116 aa5.07□□□□□ -1.6
CDC42BPA-210ENST00000462553 GAGE12HA6NDE8 117 aa5.07□□□□□ -1.6
CDC42BPA-210ENST00000462553 PPBPP02775 128 aa5.07□□□□□ -1.6
CDC42BPA-210ENST00000462553 SLPIP03973 132 aa5.07□□□□□ -1.6
CDC42BPA-210ENST00000462553 FCER1GP30273 86 aa5.07□□□□□ -1.6
CDC42BPA-210ENST00000462553 RPL39P62891 51 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-210ENST00000462553 FOXI1Q12951 378 aa5.07□□□□□ -1.6
CDC42BPA-210ENST00000462553 TMEM136Q6ZRR5 245 aa5.07□□□□□ -1.6
CDC42BPA-210ENST00000462553 Q6ZUT4 128 aa5.07□□□□□ -1.6
CDC42BPA-210ENST00000462553 ORMDL3Q8N138 153 aa5.07□□□□□ -1.6
CDC42BPA-210ENST00000462553 CHCHD10Q8WYQ3 142 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-210ENST00000462553 BTF3L4Q96K17 158 aa5.07□□□□□ -1.6
CDC42BPA-210ENST00000462553 PRELID3AQ96N28 172 aa5.07□□□□□ -1.6
CDC42BPA-210ENST00000462553 IMMP2LQ96T52 175 aa5.07□□□□□ -1.6
CDC42BPA-210ENST00000462553 KIR2DL4Q99706 377 aa5.07□□□□□ -1.6
CDC42BPA-210ENST00000462553 CARHSP1Q9Y2V2 147 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-210ENST00000462553 LINC00959A0A1B0GUT2 108 aa5.06□□□□□ -1.6
CDC42BPA-210ENST00000462553 KRTAP9-7A8MTY7 169 aa5.06□□□□□ -1.6
CDC42BPA-210ENST00000462553 TCAPO15273 167 aa5.06□□□□□ -1.6
CDC42BPA-210ENST00000462553 RNASE13Q5GAN3 156 aaKnown RBP5.06□□□□□ -1.6
CDC42BPA-210ENST00000462553 ZNF664Q8N3J9 261 aa5.06□□□□□ -1.6
CDC42BPA-210ENST00000462553 TIMM21Q9BVV7 248 aa5.06□□□□□ -1.6
CDC42BPA-210ENST00000462553 CTDSP1Q9GZU7 261 aa5.06□□□□□ -1.6
CDC42BPA-210ENST00000462553 CSDC2Q9Y534 153 aaKnown RBP5.06□□□□□ -1.6
CDC42BPA-210ENST00000462553 TRAV9-1A0A075B6T8 112 aa5.05□□□□□ -1.6
CDC42BPA-210ENST00000462553 PRSS47A8MTI9 375 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms