RNA–Protein interactions for RNA: ENST00000462212.5

ITSN1-222, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-222	ENST00000462212	VCY	O14598	125 aa		5.43	□□□□□ -1.54
ITSN1-222	ENST00000462212	PRSS1	P07477	247 aa		5.43	□□□□□ -1.54
ITSN1-222	ENST00000462212	AMMECR1L	Q6DCA0	310 aa		5.43	□□□□□ -1.54
ITSN1-222	ENST00000462212	MRPL52	Q86TS9	123 aa	Known RBP	5.43	□□□□□ -1.54
ITSN1-222	ENST00000462212	C20orf78	Q9BR46	151 aa		5.43	□□□□□ -1.54
ITSN1-222	ENST00000462212	C7orf77	A4D0Y5	90 aa		5.42	□□□□□ -1.54
ITSN1-222	ENST00000462212		F8W036	122 aa		5.42	□□□□□ -1.54
ITSN1-222	ENST00000462212	MT-ND4L	P03901	98 aa		5.42	□□□□□ -1.54
ITSN1-222	ENST00000462212	ADCYAP1	P18509	176 aa		5.42	□□□□□ -1.54
ITSN1-222	ENST00000462212	LINC01620	Q4KN68	170 aa		5.42	□□□□□ -1.54
ITSN1-222	ENST00000462212	DGAT2L7P	Q6IED9	249 aa		5.42	□□□□□ -1.54
ITSN1-222	ENST00000462212	RNASEK	Q6P5S7	137 aa	Known RBP	5.42	□□□□□ -1.54
ITSN1-222	ENST00000462212	CLRN3	Q8NCR9	226 aa		5.42	□□□□□ -1.54
ITSN1-222	ENST00000462212	TMEM218	A2RU14	115 aa		5.41	□□□□□ -1.54
ITSN1-222	ENST00000462212	EPM2A	B3EWF7	344 aa		5.41	□□□□□ -1.54
ITSN1-222	ENST00000462212		D6R8Y8	96 aa		5.41	□□□□□ -1.54
ITSN1-222	ENST00000462212	PHOX2A	O14813	284 aa		5.41	□□□□□ -1.54
ITSN1-222	ENST00000462212	TNFRSF6B	O95407	300 aa		5.41	□□□□□ -1.54
ITSN1-222	ENST00000462212	PPBP	P02775	128 aa		5.41	□□□□□ -1.54
ITSN1-222	ENST00000462212	CKS2	P33552	79 aa		5.41	□□□□□ -1.54
ITSN1-222	ENST00000462212	HAMP	P81172	84 aa		5.41	□□□□□ -1.54
ITSN1-222	ENST00000462212	LINC00528	Q8N1L1	170 aa		5.41	□□□□□ -1.54
ITSN1-222	ENST00000462212	OR5A1	Q8NGJ0	315 aa		5.41	□□□□□ -1.54
ITSN1-222	ENST00000462212	BTF3L4	Q96K17	158 aa		5.41	□□□□□ -1.54
ITSN1-222	ENST00000462212	KIR2DL4	Q99706	377 aa		5.41	□□□□□ -1.54
ITSN1-222	ENST00000462212	CDC42SE2	Q9NRR3	84 aa		5.41	□□□□□ -1.54
ITSN1-222	ENST00000462212	CSDC2	Q9Y534	153 aa	Known RBP	5.41	□□□□□ -1.54
ITSN1-222	ENST00000462212	GAGE12H	A6NDE8	117 aa		5.4	□□□□□ -1.54
ITSN1-222	ENST00000462212	TCAP	O15273	167 aa		5.4	□□□□□ -1.54
ITSN1-222	ENST00000462212	NPY	P01303	97 aa		5.4	□□□□□ -1.54
ITSN1-222	ENST00000462212	FCER1G	P30273	86 aa		5.4	□□□□□ -1.54
ITSN1-222	ENST00000462212	CNBP	P62633	177 aa	Known RBP	5.4	□□□□□ -1.54
ITSN1-222	ENST00000462212		Q5VSD8	79 aa		5.4	□□□□□ -1.54
ITSN1-222	ENST00000462212	ZNF664	Q8N3J9	261 aa		5.4	□□□□□ -1.54
ITSN1-222	ENST00000462212	C15orf56	Q8N910	161 aa		5.4	□□□□□ -1.54
ITSN1-222	ENST00000462212	C9orf163	Q8N9P6	203 aa		5.4	□□□□□ -1.54
ITSN1-222	ENST00000462212	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	5.4	□□□□□ -1.54
ITSN1-222	ENST00000462212	TMEM101	Q96IK0	257 aa		5.4	□□□□□ -1.54
ITSN1-222	ENST00000462212	IMMP2L	Q96T52	175 aa		5.4	□□□□□ -1.54
ITSN1-222	ENST00000462212	SMIM2	Q9BVW6	85 aa		5.4	□□□□□ -1.54
ITSN1-222	ENST00000462212	UBE2D4	Q9Y2X8	147 aa		5.4	□□□□□ -1.54
ITSN1-222	ENST00000462212	IGKV3OR2-268	A0A0C4DH90	116 aa		5.39	□□□□□ -1.55
ITSN1-222	ENST00000462212	LINC00959	A0A1B0GUT2	108 aa		5.39	□□□□□ -1.55
ITSN1-222	ENST00000462212	PRSS47	A8MTI9	375 aa		5.39	□□□□□ -1.55
ITSN1-222	ENST00000462212	SNAPIN	O95295	136 aa		5.39	□□□□□ -1.55
ITSN1-222	ENST00000462212	SMR3B	P02814	79 aa	Predicted RBP	5.39	□□□□□ -1.55
ITSN1-222	ENST00000462212	SLPI	P03973	132 aa		5.39	□□□□□ -1.55
ITSN1-222	ENST00000462212	SMAGP	Q0VAQ4	97 aa		5.39	□□□□□ -1.55
ITSN1-222	ENST00000462212	FOXI1	Q12951	378 aa		5.39	□□□□□ -1.55
ITSN1-222	ENST00000462212	TMEM136	Q6ZRR5	245 aa		5.39	□□□□□ -1.55
ITSN1-222	ENST00000462212	SCX	Q7RTU7	201 aa		5.39	□□□□□ -1.55
ITSN1-222	ENST00000462212	ORMDL3	Q8N138	153 aa		5.39	□□□□□ -1.55
ITSN1-222	ENST00000462212	CHAC1	Q9BUX1	264 aa		5.39	□□□□□ -1.55
ITSN1-222	ENST00000462212	TIMM21	Q9BVV7	248 aa		5.39	□□□□□ -1.55
ITSN1-222	ENST00000462212	SEC11C	Q9BY50	192 aa		5.39	□□□□□ -1.55
ITSN1-222	ENST00000462212	hDV102S1	A0JD36	115 aa		5.38	□□□□□ -1.55
ITSN1-222	ENST00000462212	PCP4L1	A6NKN8	68 aa		5.38	□□□□□ -1.55
ITSN1-222	ENST00000462212	C10orf91	Q5T1B1	145 aa		5.38	□□□□□ -1.55
ITSN1-222	ENST00000462212	CFAP161	Q6P656	301 aa		5.38	□□□□□ -1.55
ITSN1-222	ENST00000462212	COMMD7	Q86VX2	200 aa		5.38	□□□□□ -1.55
ITSN1-222	ENST00000462212	FAM104A	Q969W3	186 aa		5.38	□□□□□ -1.55
ITSN1-222	ENST00000462212	PRELID3A	Q96N28	172 aa		5.38	□□□□□ -1.55
ITSN1-222	ENST00000462212	CTDSP1	Q9GZU7	261 aa		5.38	□□□□□ -1.55
ITSN1-222	ENST00000462212	LAMTOR2	Q9Y2Q5	125 aa		5.38	□□□□□ -1.55
ITSN1-222	ENST00000462212	GVQW2	A0A096LPI5	108 aa	Predicted RBP	5.37	□□□□□ -1.55
ITSN1-222	ENST00000462212	CCL25	O15444	150 aa		5.37	□□□□□ -1.55
ITSN1-222	ENST00000462212	CD164L2	Q6UWJ8	174 aa		5.37	□□□□□ -1.55
ITSN1-222	ENST00000462212	SDIM1	Q6ZPB5	146 aa		5.37	□□□□□ -1.55
ITSN1-222	ENST00000462212	CIRBP-AS1	Q8TBR5	109 aa		5.37	□□□□□ -1.55
ITSN1-222	ENST00000462212	TMEM18	Q96B42	140 aa		5.37	□□□□□ -1.55
ITSN1-222	ENST00000462212	TRAV9-1	A0A075B6T8	112 aa		5.36	□□□□□ -1.55
ITSN1-222	ENST00000462212	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	5.36	□□□□□ -1.55
ITSN1-222	ENST00000462212	C1orf196	B1AJZ1	125 aa		5.36	□□□□□ -1.55
ITSN1-222	ENST00000462212	FAM229A	H3BQW9	127 aa		5.36	□□□□□ -1.55
ITSN1-222	ENST00000462212	XCL1	P47992	114 aa		5.36	□□□□□ -1.55
ITSN1-222	ENST00000462212	RPL39	P62891	51 aa	Known RBP	5.36	□□□□□ -1.55
ITSN1-222	ENST00000462212	CIRBP	Q14011	172 aa	Known RBP	5.36	□□□□□ -1.55
ITSN1-222	ENST00000462212	SS18	Q15532	418 aa		5.36	□□□□□ -1.55
ITSN1-222	ENST00000462212		Q6ZUT4	128 aa		5.36	□□□□□ -1.55
ITSN1-222	ENST00000462212	SPANXA1	Q9NS26	97 aa		5.36	□□□□□ -1.55
ITSN1-222	ENST00000462212	AP5S1	Q9NUS5	200 aa		5.36	□□□□□ -1.55
ITSN1-222	ENST00000462212	CARHSP1	Q9Y2V2	147 aa	Known RBP	5.36	□□□□□ -1.55
ITSN1-222	ENST00000462212	FLG2	Q5D862	2391 aa	Predicted RBP	5.36	□□□□□ -1.55
ITSN1-222	ENST00000462212	IGHV1-58	A0A0C4DH39	117 aa		5.35	□□□□□ -1.55
ITSN1-222	ENST00000462212	PANO1	I0J062	215 aa		5.35	□□□□□ -1.55
ITSN1-222	ENST00000462212	MRPS36	P82909	103 aa	Known RBP	5.35	□□□□□ -1.55
ITSN1-222	ENST00000462212	MAP1LC3A	Q9H492	121 aa		5.35	□□□□□ -1.55
ITSN1-222	ENST00000462212	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	5.35	□□□□□ -1.55
ITSN1-222	ENST00000462212	SRRM2	Q9UQ35	2752 aa	Known RBP	5.35	□□□□□ -1.55
ITSN1-222	ENST00000462212	IGHV3-64	A0A075B6Q5	118 aa		5.34	□□□□□ -1.55
ITSN1-222	ENST00000462212	INAFM2	P0DMQ5	153 aa		5.34	□□□□□ -1.55
ITSN1-222	ENST00000462212	RAB5A	P20339	215 aa		5.34	□□□□□ -1.55
ITSN1-222	ENST00000462212	HIGD2B	Q4VC39	106 aa		5.34	□□□□□ -1.55
ITSN1-222	ENST00000462212	RNASE13	Q5GAN3	156 aa	Known RBP	5.34	□□□□□ -1.55
ITSN1-222	ENST00000462212		Q8N8P6	123 aa		5.34	□□□□□ -1.55
ITSN1-222	ENST00000462212	PYGO1	Q9Y3Y4	419 aa		5.34	□□□□□ -1.55
ITSN1-222	ENST00000462212	TRAV13-1	A0A0B4J241	112 aa		5.33	□□□□□ -1.56
ITSN1-222	ENST00000462212	LOC389332	A0A1B0GUA5	103 aa		5.33	□□□□□ -1.56
ITSN1-222	ENST00000462212		K7EMI3	77 aa		5.33	□□□□□ -1.56
ITSN1-222	ENST00000462212	KRTAP10-4	P60372	401 aa	Predicted RBP	5.33	□□□□□ -1.56

Retrieved 100 of 20,778 RNA–protein pairs in 68 ms