RNA–Protein interactions for RNA: ENST00000461674.5

LRCH3-210, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 537 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-210ENST00000461674 SPTBP11277 2137 aa4.09□□□□□ -1.76
LRCH3-210ENST00000461674 INTS1Q8N201 2190 aaKnown RBP4.09□□□□□ -1.76
LRCH3-210ENST00000461674 SONP18583 2426 aaKnown RBP4.09□□□□□ -1.76
LRCH3-210ENST00000461674 LRCOL1A6NCL2 159 aa4.08□□□□□ -1.76
LRCH3-210ENST00000461674 CTSGP08311 255 aa4.08□□□□□ -1.76
LRCH3-210ENST00000461674 HSD52Q0P140 79 aa4.08□□□□□ -1.76
LRCH3-210ENST00000461674 ZNF846Q147U1 533 aa4.08□□□□□ -1.76
LRCH3-210ENST00000461674 DEFB110Q30KQ9 67 aa4.08□□□□□ -1.76
LRCH3-210ENST00000461674 NCBP2-AS2Q69YL0 99 aa4.08□□□□□ -1.76
LRCH3-210ENST00000461674 ATP11AUNQ6ZP68 121 aa4.08□□□□□ -1.76
LRCH3-210ENST00000461674 C9orf163Q8N9P6 203 aa4.08□□□□□ -1.76
LRCH3-210ENST00000461674 PLPP5Q8NEB5 264 aa4.08□□□□□ -1.76
LRCH3-210ENST00000461674 SEC11CQ9BY50 192 aa4.08□□□□□ -1.76
LRCH3-210ENST00000461674 RPRMQ9NS64 109 aa4.08□□□□□ -1.76
LRCH3-210ENST00000461674 VPS13CQ709C8 3753 aa4.08□□□□□ -1.76
LRCH3-210ENST00000461674 IGHV1-24A0A0C4DH33 117 aa4.07□□□□□ -1.76
LRCH3-210ENST00000461674 ZNF705FA8MVS1 300 aaPredicted RBP4.07□□□□□ -1.76
LRCH3-210ENST00000461674 PIRTP0C851 137 aa4.07□□□□□ -1.76
LRCH3-210ENST00000461674 SSR2P43308 183 aa4.07□□□□□ -1.76
LRCH3-210ENST00000461674 Q6ZTI0 123 aa4.07□□□□□ -1.76
LRCH3-210ENST00000461674 TMEM254Q8TBM7 123 aa4.07□□□□□ -1.76
LRCH3-210ENST00000461674 DOCK10Q96BY6 2186 aa4.07□□□□□ -1.76
LRCH3-210ENST00000461674 SCN3AQ9NY46 2000 aa4.07□□□□□ -1.76
LRCH3-210ENST00000461674 ANK2Q01484 3957 aa4.06□□□□□ -1.76
LRCH3-210ENST00000461674 Q56UQ5 140 aa4.06□□□□□ -1.76
LRCH3-210ENST00000461674 MIC13Q5XKP0 118 aa4.06□□□□□ -1.76
LRCH3-210ENST00000461674 ARPINQ7Z6K5 226 aa4.06□□□□□ -1.76
LRCH3-210ENST00000461674 LINC00269Q8N2A0 174 aa4.06□□□□□ -1.76
LRCH3-210ENST00000461674 ATP6V0E2Q8NHE4 81 aa4.06□□□□□ -1.76
LRCH3-210ENST00000461674 KRTAP4-5Q9BYR2 181 aa4.06□□□□□ -1.76
LRCH3-210ENST00000461674 KIAA1549Q9HCM3 1950 aa4.05□□□□□ -1.76
LRCH3-210ENST00000461674 ASAH2BP0C7U1 165 aa4.05□□□□□ -1.76
LRCH3-210ENST00000461674 CATR1Q13166 79 aa4.05□□□□□ -1.76
LRCH3-210ENST00000461674 NCMAPQ5T1S8 102 aa4.05□□□□□ -1.76
LRCH3-210ENST00000461674 TAS2R8Q9NYW2 309 aa4.05□□□□□ -1.76
LRCH3-210ENST00000461674 CHCHD2Q9Y6H1 151 aaPredicted RBP4.05□□□□□ -1.76
LRCH3-210ENST00000461674 MGAM2Q2M2H8 2515 aa4.05□□□□□ -1.76
LRCH3-210ENST00000461674 IGKV3D-11A0A0A0MRZ8 115 aa4.04□□□□□ -1.76
LRCH3-210ENST00000461674 H0YGG7 62 aa4.04□□□□□ -1.76
LRCH3-210ENST00000461674 KRTAP13-2Q52LG2 175 aa4.04□□□□□ -1.76
LRCH3-210ENST00000461674 FAM19A2Q8N3H0 131 aa4.04□□□□□ -1.76
LRCH3-210ENST00000461674 SERP1Q9Y6X1 66 aa4.04□□□□□ -1.76
LRCH3-210ENST00000461674 ZANQ9Y493 2812 aa4.04□□□□□ -1.76
LRCH3-210ENST00000461674 LOC107984156A0A0G2JMH3 177 aa4.03□□□□□ -1.76
LRCH3-210ENST00000461674 KRTAP1-1Q07627 177 aa4.03□□□□□ -1.76
LRCH3-210ENST00000461674 MRPL54Q6P161 138 aaKnown RBP4.03□□□□□ -1.76
LRCH3-210ENST00000461674 ARL17AQ8IVW1 177 aa4.03□□□□□ -1.76
LRCH3-210ENST00000461674 CYYR1Q96J86 154 aa4.03□□□□□ -1.76
LRCH3-210ENST00000461674 NOTCH1P46531 2555 aa4.02□□□□□ -1.77
LRCH3-210ENST00000461674 UQCRHLA0A096LP55 91 aa4.02□□□□□ -1.77
LRCH3-210ENST00000461674 TRAV12-1A0A0B4J245 112 aa4.02□□□□□ -1.77
LRCH3-210ENST00000461674 C3orf85A0A1B0GTC6 90 aa4.02□□□□□ -1.77
LRCH3-210ENST00000461674 TCRBV4S1A1TA0A5B7 111 aa4.02□□□□□ -1.77
LRCH3-210ENST00000461674 GEMIN2O14893 280 aaKnown RBP4.02□□□□□ -1.77
LRCH3-210ENST00000461674 CCL19Q99731 98 aa4.02□□□□□ -1.77
LRCH3-210ENST00000461674 SMIM7Q9BQ49 75 aa4.02□□□□□ -1.77
LRCH3-210ENST00000461674 TTTY12Q9BZ98 90 aa4.02□□□□□ -1.77
LRCH3-210ENST00000461674 NOP16Q9Y3C1 178 aaKnown RBP4.02□□□□□ -1.77
LRCH3-210ENST00000461674 TRAV10A0A0B4J240 114 aa4.01□□□□□ -1.77
LRCH3-210ENST00000461674 E7EQL1 145 aa4.01□□□□□ -1.77
LRCH3-210ENST00000461674 APOC4-APOC2K7ER74 178 aa4.01□□□□□ -1.77
LRCH3-210ENST00000461674 APOC2P02655 101 aa4.01□□□□□ -1.77
LRCH3-210ENST00000461674 MEGF8Q7Z7M0 2845 aa4□□□□□ -1.77
LRCH3-210ENST00000461674 MCRIP1C9JLW8 97 aa4□□□□□ -1.77
LRCH3-210ENST00000461674 EDF1O60869 148 aaKnown RBP4□□□□□ -1.77
LRCH3-210ENST00000461674 ERC2-IT1O76042 136 aa4□□□□□ -1.77
LRCH3-210ENST00000461674 STATHP02808 62 aa4□□□□□ -1.77
LRCH3-210ENST00000461674 LINC00315P59091 139 aa4□□□□□ -1.77
LRCH3-210ENST00000461674 VSTM2AQ8TAG5 236 aa4□□□□□ -1.77
LRCH3-210ENST00000461674 REG4Q9BYZ8 158 aa4□□□□□ -1.77
LRCH3-210ENST00000461674 ABCA1O95477 2261 aa4□□□□□ -1.77
LRCH3-210ENST00000461674 PKD1L1Q8TDX9 2849 aa3.99□□□□□ -1.77
LRCH3-210ENST00000461674 DNAJC13O75165 2243 aa3.99□□□□□ -1.77
LRCH3-210ENST00000461674 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.99□□□□□ -1.773e-8■■■■□ 20.9
LRCH3-210ENST00000461674 DEFB108AA8MXU0 73 aa3.99□□□□□ -1.77
LRCH3-210ENST00000461674 J3QLW9 94 aa3.99□□□□□ -1.77
LRCH3-210ENST00000461674 OR2T2Q6IF00 324 aa3.99□□□□□ -1.77
LRCH3-210ENST00000461674 SFT2D1Q8WV19 159 aa3.99□□□□□ -1.77
LRCH3-210ENST00000461674 HRNRQ86YZ3 2850 aaPredicted RBP3.99□□□□□ -1.77
LRCH3-210ENST00000461674 IGLV6-57P01721 117 aa3.98□□□□□ -1.77
LRCH3-210ENST00000461674 C6orf52Q5T4I8 152 aa3.98□□□□□ -1.77
LRCH3-210ENST00000461674 Q6AWC8 147 aa3.98□□□□□ -1.77
LRCH3-210ENST00000461674 C2orf82Q6UX34 121 aa3.98□□□□□ -1.77
LRCH3-210ENST00000461674 CASC2Q6XLA1 102 aa3.98□□□□□ -1.77
LRCH3-210ENST00000461674 TSLPQ969D9 159 aa3.98□□□□□ -1.77
LRCH3-210ENST00000461674 LSM10Q969L4 123 aaKnown RBP3.98□□□□□ -1.77
LRCH3-210ENST00000461674 LINC00526Q96FQ7 95 aa3.98□□□□□ -1.77
LRCH3-210ENST00000461674 KRTAP2-2Q9BYT5 123 aa3.98□□□□□ -1.77
LRCH3-210ENST00000461674 CHD3Q12873 2000 aaKnown RBP3.98□□□□□ -1.77
LRCH3-210ENST00000461674 CUBNO60494 3623 aa3.98□□□□□ -1.77
LRCH3-210ENST00000461674 SPINK8P0C7L1 97 aa3.97□□□□□ -1.77
LRCH3-210ENST00000461674 P0C880 135 aa3.97□□□□□ -1.77
LRCH3-210ENST00000461674 IFITM1P13164 125 aa3.97□□□□□ -1.77
LRCH3-210ENST00000461674 PRR9Q5T870 116 aa3.97□□□□□ -1.77
LRCH3-210ENST00000461674 SLC25A26Q70HW3 274 aa3.97□□□□□ -1.77
LRCH3-210ENST00000461674 SVBPQ8N300 66 aa3.97□□□□□ -1.77
LRCH3-210ENST00000461674 TIMM21Q9BVV7 248 aa3.97□□□□□ -1.77
LRCH3-210ENST00000461674 ANK3Q12955 4377 aaKnown RBP3.97□□□□□ -1.77
LRCH3-210ENST00000461674 MPDZO75970 2070 aa3.96□□□□□ -1.77
LRCH3-210ENST00000461674 HEATR5BQ9P2D3 2071 aa3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms