RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 UBE2D1P51668 147 aa8.27□□□□□ -1.09
PABPC4-208ENST00000461578 FOXA3P55318 350 aaPredicted RBP8.27□□□□□ -1.09
PABPC4-208ENST00000461578 EIF5AL1Q6IS14 154 aaKnown RBP8.27□□□□□ -1.09
PABPC4-208ENST00000461578 KRTAP11-1Q8IUC1 163 aa8.27□□□□□ -1.09
PABPC4-208ENST00000461578 C9orf62Q8N4C0 152 aa8.27□□□□□ -1.09
PABPC4-208ENST00000461578 C11orf52Q96A22 123 aa8.27□□□□□ -1.09
PABPC4-208ENST00000461578 G3V3Q6 166 aa8.26□□□□□ -1.09
PABPC4-208ENST00000461578 KRTAP1-4P0C5Y4 121 aa8.26□□□□□ -1.09
PABPC4-208ENST00000461578 H2AFB1P0C5Y9 115 aa8.26□□□□□ -1.09
PABPC4-208ENST00000461578 GNG4P50150 75 aa8.26□□□□□ -1.09
PABPC4-208ENST00000461578 TMEM242Q9NWH2 141 aa8.26□□□□□ -1.09
PABPC4-208ENST00000461578 GNG13Q9P2W3 67 aa8.26□□□□□ -1.09
PABPC4-208ENST00000461578 I3L3M4 83 aa8.25□□□□□ -1.09
PABPC4-208ENST00000461578 COX7A2LO14548 114 aa8.25□□□□□ -1.09
PABPC4-208ENST00000461578 BCL2L11O43521 198 aa8.25□□□□□ -1.09
PABPC4-208ENST00000461578 CDC42SE2Q9NRR3 84 aa8.25□□□□□ -1.09
PABPC4-208ENST00000461578 TRAV1-1A0A0B4J248 108 aa8.24□□□□□ -1.09
PABPC4-208ENST00000461578 FAM168BA1KXE4 195 aa8.24□□□□□ -1.09
PABPC4-208ENST00000461578 UMAD1C9J7I0 102 aa8.24□□□□□ -1.09
PABPC4-208ENST00000461578 ESDP10768 282 aa8.24□□□□□ -1.09
PABPC4-208ENST00000461578 CCL20P78556 96 aa8.24□□□□□ -1.09
PABPC4-208ENST00000461578 MRAP2Q96G30 205 aa8.24□□□□□ -1.09
PABPC4-208ENST00000461578 TSPAN13O95857 204 aa8.23□□□□□ -1.09
PABPC4-208ENST00000461578 TSHBP01222 138 aa8.23□□□□□ -1.09
PABPC4-208ENST00000461578 RNASE13Q5GAN3 156 aaKnown RBP8.23□□□□□ -1.09
PABPC4-208ENST00000461578 SMIM15Q7Z3B0 74 aa8.23□□□□□ -1.09
PABPC4-208ENST00000461578 C5orf38Q86SI9 138 aa8.23□□□□□ -1.09
PABPC4-208ENST00000461578 NUDT10Q8NFP7 164 aa8.23□□□□□ -1.09
PABPC4-208ENST00000461578 NUDT11Q96G61 164 aa8.23□□□□□ -1.09
PABPC4-208ENST00000461578 CNFNQ9BYD5 112 aa8.23□□□□□ -1.09
PABPC4-208ENST00000461578 MANBALQ9NQG1 85 aa8.23□□□□□ -1.09
PABPC4-208ENST00000461578 TRBV20OR9-2A0A075B6H5 130 aa8.22□□□□□ -1.09
PABPC4-208ENST00000461578 SMLR1H3BR10 107 aa8.22□□□□□ -1.09
PABPC4-208ENST00000461578 SPAG11BQ08648 103 aa8.22□□□□□ -1.09
PABPC4-208ENST00000461578 FAM19A5Q7Z5A7 132 aaPredicted RBP8.22□□□□□ -1.09
PABPC4-208ENST00000461578 SMIM12Q96EX1 92 aa8.22□□□□□ -1.09
PABPC4-208ENST00000461578 C2orf48Q96LS8 159 aa8.22□□□□□ -1.09
PABPC4-208ENST00000461578 C1orf196B1AJZ1 125 aa8.21□□□□□ -1.1
PABPC4-208ENST00000461578 RPL13AP40429 203 aaKnown RBP8.21□□□□□ -1.1
PABPC4-208ENST00000461578 TEX261Q6UWH6 196 aa8.21□□□□□ -1.1
PABPC4-208ENST00000461578 MRPL52Q86TS9 123 aaKnown RBP8.21□□□□□ -1.1
PABPC4-208ENST00000461578 RNASE7Q9H1E1 156 aaKnown RBP8.21□□□□□ -1.1
PABPC4-208ENST00000461578 RPP21Q9H633 154 aaKnown RBP8.21□□□□□ -1.1
PABPC4-208ENST00000461578 BIN3Q9NQY0 253 aa8.21□□□□□ -1.1
PABPC4-208ENST00000461578 TRAV13-1A0A0B4J241 112 aa8.2□□□□□ -1.1
PABPC4-208ENST00000461578 TSKUQ8WUA8 353 aa8.2□□□□□ -1.1
PABPC4-208ENST00000461578 ST20Q9HBF5 79 aa8.2□□□□□ -1.1
PABPC4-208ENST00000461578 MED9Q9NWA0 146 aa8.2□□□□□ -1.1
PABPC4-208ENST00000461578 TRBV6-5A0A0K0K1A5 114 aa8.19□□□□□ -1.1
PABPC4-208ENST00000461578 C7orf77A4D0Y5 90 aa8.19□□□□□ -1.1
PABPC4-208ENST00000461578 UBE2BP63146 152 aa8.18□□□□□ -1.1
PABPC4-208ENST00000461578 RNF151Q2KHN1 245 aa8.18□□□□□ -1.1
PABPC4-208ENST00000461578 GAGE2EQ4V326 116 aa8.17□□□□□ -1.1
PABPC4-208ENST00000461578 GAGE2DQ9UEU5 116 aa8.17□□□□□ -1.1
PABPC4-208ENST00000461578 K7EN84 100 aa8.16□□□□□ -1.1
PABPC4-208ENST00000461578 M0QXV9 152 aa8.16□□□□□ -1.1
PABPC4-208ENST00000461578 PDE6DO43924 150 aa8.16□□□□□ -1.1
PABPC4-208ENST00000461578 ZNF345Q14585 488 aa8.16□□□□□ -1.1
PABPC4-208ENST00000461578 C10orf25Q5T742 122 aa8.16□□□□□ -1.1
PABPC4-208ENST00000461578 ORAOV1Q8WV07 137 aa8.16□□□□□ -1.1
PABPC4-208ENST00000461578 IMMP2LQ96T52 175 aa8.16□□□□□ -1.1
PABPC4-208ENST00000461578 MRPL35Q9NZE8 188 aaKnown RBP8.16□□□□□ -1.1
PABPC4-208ENST00000461578 KANTRA0A1W2PQU2 76 aa8.15□□□□□ -1.1
PABPC4-208ENST00000461578 POLR2KP53803 58 aaKnown RBP8.15□□□□□ -1.1
PABPC4-208ENST00000461578 Q6ZUT4 128 aa8.15□□□□□ -1.1
PABPC4-208ENST00000461578 KRTAP7-1Q8IUC3 87 aa8.15□□□□□ -1.1
PABPC4-208ENST00000461578 UBE2D4Q9Y2X8 147 aa8.15□□□□□ -1.1
PABPC4-208ENST00000461578 TRBV27A0A0K0K1C4 114 aa8.14□□□□□ -1.11
PABPC4-208ENST00000461578 NDUFA1O15239 70 aa8.14□□□□□ -1.11
PABPC4-208ENST00000461578 FCER1GP30273 86 aa8.14□□□□□ -1.11
PABPC4-208ENST00000461578 OR10D4PQ8NGN7 298 aa8.14□□□□□ -1.11
PABPC4-208ENST00000461578 CARHSP1Q9Y2V2 147 aaKnown RBP8.14□□□□□ -1.11
PABPC4-208ENST00000461578 UNQ6190/PRO20217Q6UXQ8 127 aa8.13□□□□□ -1.11
PABPC4-208ENST00000461578 OCC1Q8TAD7 63 aa8.13□□□□□ -1.11
PABPC4-208ENST00000461578 C6orf48Q9UBA6 75 aa8.13□□□□□ -1.11
PABPC4-208ENST00000461578 GATCO43716 136 aaKnown RBP8.12□□□□□ -1.11
PABPC4-208ENST00000461578 TLX1NBP0CAT3 122 aa8.12□□□□□ -1.11
PABPC4-208ENST00000461578 FAM210AQ96ND0 272 aa8.12□□□□□ -1.11
PABPC4-208ENST00000461578 SMDT1Q9H4I9 107 aa8.12□□□□□ -1.11
PABPC4-208ENST00000461578 CSDC2Q9Y534 153 aaKnown RBP8.12□□□□□ -1.11
PABPC4-208ENST00000461578 SMKR1H3BMG3 65 aa8.11□□□□□ -1.11
PABPC4-208ENST00000461578 TEX46H3BTG2 121 aa8.11□□□□□ -1.11
PABPC4-208ENST00000461578 SMAGPQ0VAQ4 97 aa8.11□□□□□ -1.11
PABPC4-208ENST00000461578 ZNF861PO60384 105 aa8.1□□□□□ -1.11
PABPC4-208ENST00000461578 RAB4AP20338 218 aa8.1□□□□□ -1.11
PABPC4-208ENST00000461578 TMEM241Q24JQ0 296 aa8.1□□□□□ -1.11
PABPC4-208ENST00000461578 AMN1Q8IY45 258 aa8.1□□□□□ -1.11
PABPC4-208ENST00000461578 BORCS7Q96B45 105 aa8.1□□□□□ -1.11
PABPC4-208ENST00000461578 RETNLBQ9BQ08 111 aa8.1□□□□□ -1.11
PABPC4-208ENST00000461578 A0A087X002 238 aa8.09□□□□□ -1.11
PABPC4-208ENST00000461578 A8MWL6 223 aa8.09□□□□□ -1.11
PABPC4-208ENST00000461578 F8WDY8 70 aa8.09□□□□□ -1.11
PABPC4-208ENST00000461578 VCYO14598 125 aa8.09□□□□□ -1.11
PABPC4-208ENST00000461578 TMEM191AQ9H0A3 160 aa8.09□□□□□ -1.11
PABPC4-208ENST00000461578 HMSDA8MTL9 139 aa8.08□□□□□ -1.12
PABPC4-208ENST00000461578 TYMSOSQ8TAI1 123 aa8.08□□□□□ -1.12
PABPC4-208ENST00000461578 KIR2DL4Q99706 377 aa8.08□□□□□ -1.12
PABPC4-208ENST00000461578 IGHV3OR16-9A0A0B4J2B5 98 aa8.07□□□□□ -1.12
PABPC4-208ENST00000461578 C9orf129Q5T035 196 aaKnown RBP8.07□□□□□ -1.12
PABPC4-208ENST00000461578 CDIP1Q9H305 208 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms