RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 IGLV4-69A0A075B6H9 119 aa7.6□□□□□ -1.19
C9orf78-202ENST00000461349 S100A9P06702 114 aaKnown RBP7.6□□□□□ -1.19
C9orf78-202ENST00000461349 BTF3L4Q96K17 158 aa7.6□□□□□ -1.19
C9orf78-202ENST00000461349 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.59□□□□□ -1.19
C9orf78-202ENST00000461349 LINC00959A0A1B0GUT2 108 aa7.59□□□□□ -1.19
C9orf78-202ENST00000461349 IGKV2-29A2NJV5 120 aaPredicted RBP7.59□□□□□ -1.19
C9orf78-202ENST00000461349 PDE6DO43924 150 aa7.59□□□□□ -1.19
C9orf78-202ENST00000461349 ZNF25P17030 456 aaPredicted RBP7.59□□□□□ -1.19
C9orf78-202ENST00000461349 CEBPGP53567 150 aa7.59□□□□□ -1.19
C9orf78-202ENST00000461349 MEF2BQ02080 365 aaPredicted RBP7.59□□□□□ -1.19
C9orf78-202ENST00000461349 SS18Q15532 418 aa7.59□□□□□ -1.19
C9orf78-202ENST00000461349 COMMD7Q86VX2 200 aa7.59□□□□□ -1.19
C9orf78-202ENST00000461349 TMEM101Q96IK0 257 aa7.59□□□□□ -1.19
C9orf78-202ENST00000461349 FAM210AQ96ND0 272 aa7.59□□□□□ -1.19
C9orf78-202ENST00000461349 CAMK2N2Q96S95 79 aa7.59□□□□□ -1.19
C9orf78-202ENST00000461349 MLST8Q9BVC4 326 aa7.59□□□□□ -1.19
C9orf78-202ENST00000461349 CARHSP1Q9Y2V2 147 aaKnown RBP7.59□□□□□ -1.19
C9orf78-202ENST00000461349 NCR2O95944 276 aa7.58□□□□□ -1.2
C9orf78-202ENST00000461349 APCSP02743 223 aa7.58□□□□□ -1.2
C9orf78-202ENST00000461349 TRGC1P0CF51 173 aa7.58□□□□□ -1.2
C9orf78-202ENST00000461349 NTF3P20783 257 aa7.58□□□□□ -1.2
C9orf78-202ENST00000461349 MALP21145 153 aa7.58□□□□□ -1.2
C9orf78-202ENST00000461349 BAGE2Q86Y30 109 aa7.58□□□□□ -1.2
C9orf78-202ENST00000461349 NUP35Q8NFH5 326 aa7.58□□□□□ -1.2
C9orf78-202ENST00000461349 MED9Q9NWA0 146 aa7.58□□□□□ -1.2
C9orf78-202ENST00000461349 MUC17Q685J3 4493 aa7.58□□□□□ -1.2
C9orf78-202ENST00000461349 RAB19A4D1S5 217 aa7.57□□□□□ -1.2
C9orf78-202ENST00000461349 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.57□□□□□ -1.2
C9orf78-202ENST00000461349 CD164L2Q6UWJ8 174 aa7.57□□□□□ -1.2
C9orf78-202ENST00000461349 CDIP1Q9H305 208 aa7.57□□□□□ -1.2
C9orf78-202ENST00000461349 SMDT1Q9H4I9 107 aa7.57□□□□□ -1.2
C9orf78-202ENST00000461349 LINC00862A6NCI5 91 aa7.56□□□□□ -1.2
C9orf78-202ENST00000461349 NDUFA5Q16718 116 aa7.56□□□□□ -1.2
C9orf78-202ENST00000461349 OR2D3Q8NGH3 330 aa7.56□□□□□ -1.2
C9orf78-202ENST00000461349 SCO2A0A1W2PP80 73 aa7.55□□□□□ -1.2
C9orf78-202ENST00000461349 IGLC6P0CF74 106 aa7.55□□□□□ -1.2
C9orf78-202ENST00000461349 UQCC3Q6UW78 93 aa7.55□□□□□ -1.2
C9orf78-202ENST00000461349 TMEM250H0YL14 139 aa7.54□□□□□ -1.2
C9orf78-202ENST00000461349 RPS20P60866 119 aaKnown RBP7.54□□□□□ -1.2
C9orf78-202ENST00000461349 C2orf48Q96LS8 159 aa7.54□□□□□ -1.2
C9orf78-202ENST00000461349 F2Z2F3 143 aa7.53□□□□□ -1.2
C9orf78-202ENST00000461349 COX7A2LO14548 114 aa7.53□□□□□ -1.2
C9orf78-202ENST00000461349 SRP19P09132 144 aaKnown RBP7.53□□□□□ -1.2
C9orf78-202ENST00000461349 LINC01547P58512 204 aaPredicted RBP7.53□□□□□ -1.2
C9orf78-202ENST00000461349 UBE2BP63146 152 aa7.53□□□□□ -1.2
C9orf78-202ENST00000461349 SRSF3P84103 164 aaKnown RBP7.53□□□□□ -1.2
C9orf78-202ENST00000461349 KRTAP11-1Q8IUC1 163 aa7.53□□□□□ -1.2
C9orf78-202ENST00000461349 OPRPNQ99935 248 aaPredicted RBP7.53□□□□□ -1.2
C9orf78-202ENST00000461349 C19orf71A6NCJ1 209 aa7.52□□□□□ -1.21
C9orf78-202ENST00000461349 ZNF727A8MUV8 499 aa7.52□□□□□ -1.21
C9orf78-202ENST00000461349 RPL35P42766 123 aaKnown RBP7.52□□□□□ -1.21
C9orf78-202ENST00000461349 GNG4P50150 75 aa7.52□□□□□ -1.21
C9orf78-202ENST00000461349 FAM74A3Q4VXF1 159 aa7.52□□□□□ -1.21
C9orf78-202ENST00000461349 FAM19A5Q7Z5A7 132 aaPredicted RBP7.52□□□□□ -1.21
C9orf78-202ENST00000461349 C11orf52Q96A22 123 aa7.52□□□□□ -1.21
C9orf78-202ENST00000461349 SMIM7Q9BQ49 75 aa7.52□□□□□ -1.21
C9orf78-202ENST00000461349 FAM168BA1KXE4 195 aa7.51□□□□□ -1.21
C9orf78-202ENST00000461349 XKRY2A2RUG3 117 aa7.51□□□□□ -1.21
C9orf78-202ENST00000461349 F8W036 122 aa7.51□□□□□ -1.21
C9orf78-202ENST00000461349 ESDP10768 282 aa7.51□□□□□ -1.21
C9orf78-202ENST00000461349 RNF151Q2KHN1 245 aa7.51□□□□□ -1.21
C9orf78-202ENST00000461349 SLC7A5P1Q8MH63 180 aa7.51□□□□□ -1.21
C9orf78-202ENST00000461349 GATD1Q8NB37 220 aa7.51□□□□□ -1.21
C9orf78-202ENST00000461349 IMMP2LQ96T52 175 aa7.51□□□□□ -1.21
C9orf78-202ENST00000461349 SDHAF1A6NFY7 115 aa7.5□□□□□ -1.21
C9orf78-202ENST00000461349 C1orf196B1AJZ1 125 aa7.5□□□□□ -1.21
C9orf78-202ENST00000461349 TPRXLQ17RH7 258 aa7.5□□□□□ -1.21
C9orf78-202ENST00000461349 CENPWQ5EE01 88 aa7.5□□□□□ -1.21
C9orf78-202ENST00000461349 RPP21Q9H633 154 aaKnown RBP7.5□□□□□ -1.21
C9orf78-202ENST00000461349 TMEM218A2RU14 115 aa7.49□□□□□ -1.21
C9orf78-202ENST00000461349 C9JQL5 133 aa7.49□□□□□ -1.21
C9orf78-202ENST00000461349 PMCHP20382 165 aa7.49□□□□□ -1.21
C9orf78-202ENST00000461349 TMEM241Q24JQ0 296 aa7.49□□□□□ -1.21
C9orf78-202ENST00000461349 LYZL1Q6UWQ5 148 aa7.49□□□□□ -1.21
C9orf78-202ENST00000461349 RPL39LQ96EH5 51 aaKnown RBP7.49□□□□□ -1.21
C9orf78-202ENST00000461349 MRAP2Q96G30 205 aa7.49□□□□□ -1.21
C9orf78-202ENST00000461349 RETNLBQ9BQ08 111 aa7.49□□□□□ -1.21
C9orf78-202ENST00000461349 BIN3Q9NQY0 253 aa7.49□□□□□ -1.21
C9orf78-202ENST00000461349 CDC42SE2Q9NRR3 84 aa7.49□□□□□ -1.21
C9orf78-202ENST00000461349 I3L3M4 83 aa7.48□□□□□ -1.21
C9orf78-202ENST00000461349 M0QXV9 152 aa7.48□□□□□ -1.21
C9orf78-202ENST00000461349 SPAG11BQ08648 103 aa7.48□□□□□ -1.21
C9orf78-202ENST00000461349 TWIST1Q15672 202 aa7.48□□□□□ -1.21
C9orf78-202ENST00000461349 TYMSOSQ8TAI1 123 aa7.48□□□□□ -1.21
C9orf78-202ENST00000461349 NAT8Q9UHE5 227 aa7.48□□□□□ -1.21
C9orf78-202ENST00000461349 ZNF861PO60384 105 aa7.47□□□□□ -1.21
C9orf78-202ENST00000461349 ADIRFQ15847 76 aa7.47□□□□□ -1.21
C9orf78-202ENST00000461349 MRPL35Q9NZE8 188 aaKnown RBP7.47□□□□□ -1.21
C9orf78-202ENST00000461349 CRYGAP11844 174 aa7.46□□□□□ -1.22
C9orf78-202ENST00000461349 MRPL52Q86TS9 123 aaKnown RBP7.46□□□□□ -1.22
C9orf78-202ENST00000461349 OR10D4PQ8NGN7 298 aa7.46□□□□□ -1.22
C9orf78-202ENST00000461349 OCC1Q8TAD7 63 aa7.46□□□□□ -1.22
C9orf78-202ENST00000461349 SMIM12Q96EX1 92 aa7.46□□□□□ -1.22
C9orf78-202ENST00000461349 SEC11CQ9BY50 192 aa7.46□□□□□ -1.22
C9orf78-202ENST00000461349 A0A087X002 238 aa7.45□□□□□ -1.22
C9orf78-202ENST00000461349 GAGE2EQ4V326 116 aa7.45□□□□□ -1.22
C9orf78-202ENST00000461349 SMIM15Q7Z3B0 74 aa7.45□□□□□ -1.22
C9orf78-202ENST00000461349 C5orf38Q86SI9 138 aa7.45□□□□□ -1.22
C9orf78-202ENST00000461349 GAGE2DQ9UEU5 116 aa7.45□□□□□ -1.22
C9orf78-202ENST00000461349 IGLV7-46A0A075B6I9 117 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms