RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 DYSFO75923 2080 aa6.67□□□□□ -1.34
BRCA1-205ENST00000461221 SMIM11BQ8TCY0 68 aa6.67□□□□□ -1.34
BRCA1-205ENST00000461221 RNF185Q96GF1 192 aa6.67□□□□□ -1.34
BRCA1-205ENST00000461221 BBC3Q96PG8 261 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-205ENST00000461221 PLXND1Q9Y4D7 1925 aa6.67□□□□□ -1.34
BRCA1-205ENST00000461221 Q8N976 141 aa6.66□□□□□ -1.34
BRCA1-205ENST00000461221 RLFQ13129 1914 aa6.66□□□□□ -1.34
BRCA1-205ENST00000461221 ROS1P08922 2347 aa6.66□□□□□ -1.34
BRCA1-205ENST00000461221 TRAV7A0A075B6U4 112 aa6.66□□□□□ -1.34
BRCA1-205ENST00000461221 LINC00959A0A1B0GUT2 108 aa6.66□□□□□ -1.34
BRCA1-205ENST00000461221 TSHBP01222 138 aa6.66□□□□□ -1.34
BRCA1-205ENST00000461221 CNOT1A5YKK6 2376 aaKnown RBP6.66□□□□□ -1.34
BRCA1-205ENST00000461221 EBI3Q14213 229 aa6.65□□□□□ -1.34
BRCA1-205ENST00000461221 SPTAN1Q13813 2472 aaKnown RBP6.65□□□□□ -1.34
BRCA1-205ENST00000461221 KPRPQ5T749 579 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-205ENST00000461221 Q8IZM0 81 aa6.65□□□□□ -1.34
BRCA1-205ENST00000461221 Q6Q795 121 aa6.65□□□□□ -1.35
BRCA1-205ENST00000461221 LINC00482Q8N8I6 264 aa6.65□□□□□ -1.35
BRCA1-205ENST00000461221 CCDC179H3BU77 68 aa6.64□□□□□ -1.35
BRCA1-205ENST00000461221 PRYO14603 147 aa6.64□□□□□ -1.35
BRCA1-205ENST00000461221 RPL37AP8A6NKH3 93 aa6.64□□□□□ -1.35
BRCA1-205ENST00000461221 RPL28P46779 137 aaKnown RBP6.64□□□□□ -1.35
BRCA1-205ENST00000461221 PMAIP1Q13794 54 aa6.64□□□□□ -1.35
BRCA1-205ENST00000461221 ESRGQ1W209 222 aa6.64□□□□□ -1.35
BRCA1-205ENST00000461221 MSMPQ1L6U9 139 aa6.64□□□□□ -1.35
BRCA1-205ENST00000461221 Q6ZSV7 163 aa6.63□□□□□ -1.35
BRCA1-205ENST00000461221 PROK1P58294 105 aa6.63□□□□□ -1.35
BRCA1-205ENST00000461221 IGLV2-18A0A075B6J9 118 aa6.63□□□□□ -1.35
BRCA1-205ENST00000461221 MRGPRG-AS1Q2M3A8 158 aa6.63□□□□□ -1.35
BRCA1-205ENST00000461221 C22orf34Q6ZV56 151 aa6.63□□□□□ -1.35
BRCA1-205ENST00000461221 NOTCH3Q9UM47 2321 aa6.63□□□□□ -1.35
BRCA1-205ENST00000461221 TRBV7-6A0A0J9YX20 115 aa6.63□□□□□ -1.35
BRCA1-205ENST00000461221 NTM-AS1Q6ZSK4 140 aa6.63□□□□□ -1.35
BRCA1-205ENST00000461221 CRIP1P50238 77 aa6.62□□□□□ -1.35
BRCA1-205ENST00000461221 CACNA1GO43497 2377 aa6.62□□□□□ -1.35
BRCA1-205ENST00000461221 LINC00208Q96KT6 92 aa6.62□□□□□ -1.35
BRCA1-205ENST00000461221 A8MZ25 164 aa6.62□□□□□ -1.35
BRCA1-205ENST00000461221 INAFM1C9JVW0 142 aa6.62□□□□□ -1.35
BRCA1-205ENST00000461221 NRACQ8N912 160 aa6.62□□□□□ -1.35
BRCA1-205ENST00000461221 PSMG3-AS1Q96PY0 264 aa6.61□□□□□ -1.35
BRCA1-205ENST00000461221 M0R2N4 97 aa6.61□□□□□ -1.35
BRCA1-205ENST00000461221 LINC00694P0DN24 101 aa6.61□□□□□ -1.35
BRCA1-205ENST00000461221 CLUHP3Q96NS8 147 aa6.61□□□□□ -1.35
BRCA1-205ENST00000461221 CELA1Q9UNI1 258 aa6.61□□□□□ -1.35
BRCA1-205ENST00000461221 GTF3C1Q12789 2109 aa6.61□□□□□ -1.35
BRCA1-205ENST00000461221 LINC00526Q96FQ7 95 aa6.6□□□□□ -1.35
BRCA1-205ENST00000461221 OBSL1O75147 1896 aa6.6□□□□□ -1.35
BRCA1-205ENST00000461221 MED13Q9UHV7 2174 aa6.6□□□□□ -1.35
BRCA1-205ENST00000461221 C1orf137Q5JT78 98 aa6.6□□□□□ -1.35
BRCA1-205ENST00000461221 Q8NA96 180 aa6.6□□□□□ -1.35
BRCA1-205ENST00000461221 RNASE3P12724 160 aaKnown RBP6.6□□□□□ -1.35
BRCA1-205ENST00000461221 XGP55808 180 aa6.6□□□□□ -1.35
BRCA1-205ENST00000461221 BRWD1-AS2P59051 145 aa6.6□□□□□ -1.35
BRCA1-205ENST00000461221 M0QXV9 152 aa6.6□□□□□ -1.35
BRCA1-205ENST00000461221 LY6G6CO95867 125 aa6.6□□□□□ -1.35
BRCA1-205ENST00000461221 EGFEM1PQ0D2K5 195 aa6.6□□□□□ -1.35
BRCA1-205ENST00000461221 EIF4EBP1Q13541 118 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-205ENST00000461221 C2orf91Q6ZV80 131 aa6.59□□□□□ -1.35
BRCA1-205ENST00000461221 PRORYQ9H606 182 aa6.59□□□□□ -1.35
BRCA1-205ENST00000461221 NUP210Q8TEM1 1887 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-205ENST00000461221 LOC100131303A0A0U1RQF7 123 aa6.59□□□□□ -1.35
BRCA1-205ENST00000461221 KLLNB2CW77 178 aa6.59□□□□□ -1.35
BRCA1-205ENST00000461221 POLR2KP53803 58 aaKnown RBP6.59□□□□□ -1.35
BRCA1-205ENST00000461221 REG3GQ6UW15 175 aa6.59□□□□□ -1.35
BRCA1-205ENST00000461221 CHCHD7Q9BUK0 85 aa6.59□□□□□ -1.35
BRCA1-205ENST00000461221 CYSRT1A8MQ03 144 aa6.59□□□□□ -1.35
BRCA1-205ENST00000461221 ZNF843Q8N446 348 aa6.58□□□□□ -1.36
BRCA1-205ENST00000461221 ZNF702PQ9H963 129 aa6.58□□□□□ -1.36
BRCA1-205ENST00000461221 CDC42SE2Q9NRR3 84 aa6.58□□□□□ -1.36
BRCA1-205ENST00000461221 ZGRF1Q86YA3 2104 aa6.58□□□□□ -1.36
BRCA1-205ENST00000461221 IGLV2-11P01706 119 aa6.58□□□□□ -1.36
BRCA1-205ENST00000461221 RETNQ9HD89 108 aa6.58□□□□□ -1.36
BRCA1-205ENST00000461221 TANC1Q9C0D5 1861 aa6.58□□□□□ -1.36
BRCA1-205ENST00000461221 TRBV7-7A0A0K0K1E9 115 aa6.58□□□□□ -1.36
BRCA1-205ENST00000461221 Q8N814 137 aa6.58□□□□□ -1.36
BRCA1-205ENST00000461221 FRMPD3Q5JV73 1810 aa6.58□□□□□ -1.36
BRCA1-205ENST00000461221 NUPR2A6NF83 97 aa6.58□□□□□ -1.36
BRCA1-205ENST00000461221 MGAMO43451 1857 aa6.57□□□□□ -1.36
BRCA1-205ENST00000461221 IGHV6-1A0A0B4J1U7 121 aa6.57□□□□□ -1.36
BRCA1-205ENST00000461221 ZNF295-AS1Q8N0V1 137 aa6.57□□□□□ -1.36
BRCA1-205ENST00000461221 C19orf84I3L1E1 186 aa6.57□□□□□ -1.36
BRCA1-205ENST00000461221 SOSTDC1Q6X4U4 206 aa6.57□□□□□ -1.36
BRCA1-205ENST00000461221 X6R8D5 127 aa6.57□□□□□ -1.36
BRCA1-205ENST00000461221 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.57□□□□□ -1.363e-7■■■■■ 41.1
BRCA1-205ENST00000461221 Q6ZS46 218 aa6.57□□□□□ -1.36
BRCA1-205ENST00000461221 CIRBP-AS1Q8TBR5 109 aa6.57□□□□□ -1.36
BRCA1-205ENST00000461221 F8WDY8 70 aa6.57□□□□□ -1.36
BRCA1-205ENST00000461221 POM121L12Q8N7R1 296 aa6.56□□□□□ -1.36
BRCA1-205ENST00000461221 C1orf229Q6ZS94 237 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-205ENST00000461221 CREBBPQ92793 2442 aa6.55□□□□□ -1.36
BRCA1-205ENST00000461221 A0A1W2PNU3 283 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-205ENST00000461221 LINC01547P58512 204 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-205ENST00000461221 H0Y9P7 68 aa6.54□□□□□ -1.36
BRCA1-205ENST00000461221 PRR9Q5T870 116 aa6.54□□□□□ -1.36
BRCA1-205ENST00000461221 LY6G6DO95868 133 aa6.54□□□□□ -1.36
BRCA1-205ENST00000461221 YPEL4Q96NS1 127 aa6.54□□□□□ -1.36
BRCA1-205ENST00000461221 TRBV10-3A0A0K0K1G6 114 aa6.54□□□□□ -1.36
BRCA1-205ENST00000461221 C11orf71Q6IPW1 123 aa6.54□□□□□ -1.36
BRCA1-205ENST00000461221 LINC01006Q8NI28 216 aa6.54□□□□□ -1.36
BRCA1-205ENST00000461221 NANOS2P60321 138 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms