RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 ABCA4P78363 2273 aa4.66□□□□□ -1.66
HLA-DQA1-205ENST00000460633 TEX49A0A1B0GTD5 131 aa4.66□□□□□ -1.66
HLA-DQA1-205ENST00000460633 A8MZ25 164 aa4.66□□□□□ -1.66
HLA-DQA1-205ENST00000460633 ZNF80P51504 273 aaPredicted RBP4.66□□□□□ -1.66
HLA-DQA1-205ENST00000460633 HIGD2BQ4VC39 106 aa4.66□□□□□ -1.66
HLA-DQA1-205ENST00000460633 DAND5Q8N907 189 aa4.66□□□□□ -1.66
HLA-DQA1-205ENST00000460633 HIGD2AQ9BW72 106 aa4.66□□□□□ -1.66
HLA-DQA1-205ENST00000460633 Q9H8V8 135 aa4.66□□□□□ -1.66
HLA-DQA1-205ENST00000460633 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.66□□□□□ -1.66
HLA-DQA1-205ENST00000460633 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.66□□□□□ -1.66
HLA-DQA1-205ENST00000460633 IGKV2-29A2NJV5 120 aaPredicted RBP4.66□□□□□ -1.66
HLA-DQA1-205ENST00000460633 FHL3Q13643 280 aa4.66□□□□□ -1.66
HLA-DQA1-205ENST00000460633 Q8N7P7 452 aa4.66□□□□□ -1.66
HLA-DQA1-205ENST00000460633 IGHV4-4A0A075B6R2 117 aa4.66□□□□□ -1.66
HLA-DQA1-205ENST00000460633 ZNF407Q9C0G0 2248 aa4.66□□□□□ -1.66
HLA-DQA1-205ENST00000460633 ATOX1O00244 68 aa4.66□□□□□ -1.66
HLA-DQA1-205ENST00000460633 DEFB4AO15263 64 aa4.66□□□□□ -1.66
HLA-DQA1-205ENST00000460633 DOCK7Q96N67 2140 aa4.65□□□□□ -1.66
HLA-DQA1-205ENST00000460633 URB1-AS1Q96HZ7 61 aa4.65□□□□□ -1.66
HLA-DQA1-205ENST00000460633 PIK3CD-AS1Q5SR53 167 aa4.65□□□□□ -1.66
HLA-DQA1-205ENST00000460633 DOCK10Q96BY6 2186 aa4.65□□□□□ -1.67
HLA-DQA1-205ENST00000460633 CRIP1P50238 77 aa4.65□□□□□ -1.67
HLA-DQA1-205ENST00000460633 WFDC9Q8NEX5 89 aa4.65□□□□□ -1.67
HLA-DQA1-205ENST00000460633 IGLV10-54A0A075B6I4 117 aa4.65□□□□□ -1.67
HLA-DQA1-205ENST00000460633 NANOS2P60321 138 aaKnown RBP4.65□□□□□ -1.67
HLA-DQA1-205ENST00000460633 EBI3Q14213 229 aa4.65□□□□□ -1.67
HLA-DQA1-205ENST00000460633 C5orf38Q86SI9 138 aa4.65□□□□□ -1.67
HLA-DQA1-205ENST00000460633 H3BT86 120 aa4.64□□□□□ -1.67
HLA-DQA1-205ENST00000460633 FAM240AA0A1B0GVK7 77 aa4.64□□□□□ -1.67
HLA-DQA1-205ENST00000460633 UQCRQO14949 82 aa4.64□□□□□ -1.67
HLA-DQA1-205ENST00000460633 IGLV1-47P01700 117 aa4.64□□□□□ -1.67
HLA-DQA1-205ENST00000460633 SERP1Q9Y6X1 66 aa4.64□□□□□ -1.67
HLA-DQA1-205ENST00000460633 ARFGEF3Q5TH69 2177 aa4.64□□□□□ -1.67
HLA-DQA1-205ENST00000460633 K7EQG2 157 aa4.64□□□□□ -1.67
HLA-DQA1-205ENST00000460633 PCNX3Q9H6A9 2034 aa4.63□□□□□ -1.67
HLA-DQA1-205ENST00000460633 CFAP126Q5VTH2 177 aa4.63□□□□□ -1.67
HLA-DQA1-205ENST00000460633 NEXN-AS1Q8NBZ9 246 aa4.63□□□□□ -1.67
HLA-DQA1-205ENST00000460633 MSMPQ1L6U9 139 aa4.63□□□□□ -1.67
HLA-DQA1-205ENST00000460633 LINC00467Q9BRT7 94 aa4.63□□□□□ -1.67
HLA-DQA1-205ENST00000460633 DEFB1P60022 68 aa4.63□□□□□ -1.67
HLA-DQA1-205ENST00000460633 Q6JHZ5 121 aa4.63□□□□□ -1.67
HLA-DQA1-205ENST00000460633 CHCHD10Q8WYQ3 142 aaPredicted RBP4.63□□□□□ -1.67
HLA-DQA1-205ENST00000460633 PCSK5Q92824 1860 aa4.63□□□□□ -1.67
HLA-DQA1-205ENST00000460633 IGKV4-1P06312 121 aa4.63□□□□□ -1.67
HLA-DQA1-205ENST00000460633 C3orf22Q8N5N4 141 aa4.63□□□□□ -1.67
HLA-DQA1-205ENST00000460633 C14orf132Q9NPU4 83 aa4.63□□□□□ -1.67
HLA-DQA1-205ENST00000460633 ESM1Q9NQ30 184 aa4.63□□□□□ -1.67
HLA-DQA1-205ENST00000460633 IGLV2-11P01706 119 aa4.62□□□□□ -1.67
HLA-DQA1-205ENST00000460633 C4orf26Q17RF5 130 aa4.62□□□□□ -1.67
HLA-DQA1-205ENST00000460633 NCOA6Q14686 2063 aaPredicted RBP4.62□□□□□ -1.67
HLA-DQA1-205ENST00000460633 H3BS24 57 aa4.62□□□□□ -1.67
HLA-DQA1-205ENST00000460633 TMEM256-PLSCR3K7ERE1 68 aa4.62□□□□□ -1.67
HLA-DQA1-205ENST00000460633 SND1-IT1Q9HBX3 110 aa4.62□□□□□ -1.67
HLA-DQA1-205ENST00000460633 MDFIQ99750 246 aa4.62□□□□□ -1.67
HLA-DQA1-205ENST00000460633 LINC00643Q86TS7 51 aa4.62□□□□□ -1.67
HLA-DQA1-205ENST00000460633 KIAA1549Q9HCM3 1950 aa4.62□□□□□ -1.67
HLA-DQA1-205ENST00000460633 M0R378 163 aa4.61□□□□□ -1.67
HLA-DQA1-205ENST00000460633 CD164L2Q6UWJ8 174 aa4.61□□□□□ -1.67
HLA-DQA1-205ENST00000460633 ZFAND2AQ8N6M9 145 aa4.61□□□□□ -1.67
HLA-DQA1-205ENST00000460633 POLEQ07864 2286 aa4.61□□□□□ -1.67
HLA-DQA1-205ENST00000460633 GPR179Q6PRD1 2367 aa4.61□□□□□ -1.67
HLA-DQA1-205ENST00000460633 LY6LH3BQJ8 138 aa4.61□□□□□ -1.67
HLA-DQA1-205ENST00000460633 IGLV1-51P01701 117 aa4.61□□□□□ -1.67
HLA-DQA1-205ENST00000460633 PSMB8P28062 276 aa4.61□□□□□ -1.67
HLA-DQA1-205ENST00000460633 COX6B2Q6YFQ2 88 aa4.61□□□□□ -1.67
HLA-DQA1-205ENST00000460633 CADP27708 2225 aa4.61□□□□□ -1.67
HLA-DQA1-205ENST00000460633 A0A0J9YXY3 114 aa4.61□□□□□ -1.67
HLA-DQA1-205ENST00000460633 MRPS12O15235 138 aaKnown RBP4.61□□□□□ -1.67
HLA-DQA1-205ENST00000460633 TRBV30A0A0K0K1B3 111 aa4.61□□□□□ -1.67
HLA-DQA1-205ENST00000460633 WISP2O76076 250 aa4.61□□□□□ -1.67
HLA-DQA1-205ENST00000460633 ROS1P08922 2347 aa4.61□□□□□ -1.67
HLA-DQA1-205ENST00000460633 GAS8-AS1O95177 125 aa4.6□□□□□ -1.67
HLA-DQA1-205ENST00000460633 TRIAP1O43715 76 aa4.6□□□□□ -1.67
HLA-DQA1-205ENST00000460633 LINC00269Q8N2A0 174 aa4.6□□□□□ -1.67
HLA-DQA1-205ENST00000460633 TTC28Q96AY4 2481 aa4.59□□□□□ -1.67
HLA-DQA1-205ENST00000460633 COX17Q14061 63 aa4.59□□□□□ -1.67
HLA-DQA1-205ENST00000460633 C10orf25Q5T742 122 aa4.59□□□□□ -1.67
HLA-DQA1-205ENST00000460633 SDIM1Q6ZPB5 146 aa4.59□□□□□ -1.67
HLA-DQA1-205ENST00000460633 PIEZO1Q92508 2521 aa4.59□□□□□ -1.67
HLA-DQA1-205ENST00000460633 SPTBN2O15020 2390 aa4.59□□□□□ -1.67
HLA-DQA1-205ENST00000460633 NCKAP5O14513 1909 aa4.59□□□□□ -1.67
HLA-DQA1-205ENST00000460633 CDIP1Q9H305 208 aa4.59□□□□□ -1.67
HLA-DQA1-205ENST00000460633 RPL37AP61513 92 aaKnown RBP4.59□□□□□ -1.68
HLA-DQA1-205ENST00000460633 KRTAP24-1Q3LI83 254 aa4.59□□□□□ -1.68
HLA-DQA1-205ENST00000460633 C20orf203Q8NBC4 194 aa4.59□□□□□ -1.68
HLA-DQA1-205ENST00000460633 HIVEP2P31629 2446 aa4.59□□□□□ -1.68
HLA-DQA1-205ENST00000460633 LECT2O14960 151 aa4.59□□□□□ -1.68
HLA-DQA1-205ENST00000460633 DCANP1Q8TF63 244 aa4.59□□□□□ -1.68
HLA-DQA1-205ENST00000460633 USF3Q68DE3 2245 aa4.58□□□□□ -1.68
HLA-DQA1-205ENST00000460633 TRBV6-8A0A0A6YYG3 113 aa4.58□□□□□ -1.68
HLA-DQA1-205ENST00000460633 C1orf137Q5JT78 98 aa4.58□□□□□ -1.68
HLA-DQA1-205ENST00000460633 TMEM223A0PJW6 202 aa4.58□□□□□ -1.68
HLA-DQA1-205ENST00000460633 H3BNG1 76 aa4.58□□□□□ -1.68
HLA-DQA1-205ENST00000460633 MDFICQ9P1T7 246 aa4.58□□□□□ -1.68
HLA-DQA1-205ENST00000460633 ZGRF1Q86YA3 2104 aa4.58□□□□□ -1.68
HLA-DQA1-205ENST00000460633 PKDREJQ9NTG1 2253 aa4.58□□□□□ -1.68
HLA-DQA1-205ENST00000460633 Q8N2B8 174 aa4.58□□□□□ -1.68
HLA-DQA1-205ENST00000460633 MED12LQ86YW9 2145 aa4.58□□□□□ -1.68
HLA-DQA1-205ENST00000460633 SMR3AQ99954 134 aa4.58□□□□□ -1.68
HLA-DQA1-205ENST00000460633 IBA57-AS1B1ANH7 110 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms