RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 VCX2Q9H322 139 aa16.99■□□□□ 0.31
U2AF1-204ENST00000459639 FGF6P10767 208 aa16.98■□□□□ 0.31
U2AF1-204ENST00000459639 ZC2HC1BQ5TFG8 222 aa16.98■□□□□ 0.31
U2AF1-204ENST00000459639 PCP4L1A6NKN8 68 aa16.97■□□□□ 0.31
U2AF1-204ENST00000459639 DGAT2L7PQ6IED9 249 aa16.97■□□□□ 0.31
U2AF1-204ENST00000459639 Q6ZUT4 128 aa16.97■□□□□ 0.31
U2AF1-204ENST00000459639 A0A096LPF7 62 aa16.96■□□□□ 0.31
U2AF1-204ENST00000459639 IGLV4-69A0A075B6H9 119 aa16.95■□□□□ 0.3
U2AF1-204ENST00000459639 ZNF25P17030 456 aaPredicted RBP16.94■□□□□ 0.3
U2AF1-204ENST00000459639 AMMECR1LQ6DCA0 310 aa16.94■□□□□ 0.3
U2AF1-204ENST00000459639 CHCHD5Q9BSY4 110 aa16.94■□□□□ 0.3
U2AF1-204ENST00000459639 DEFB131BA0A096LNP1 70 aa16.94■□□□□ 0.3
U2AF1-204ENST00000459639 OR5A1Q8NGJ0 315 aa16.93■□□□□ 0.3
U2AF1-204ENST00000459639 TMEM101Q96IK0 257 aa16.93■□□□□ 0.3
U2AF1-204ENST00000459639 STPG4Q8N801 248 aa16.92■□□□□ 0.3
U2AF1-204ENST00000459639 C2orf88Q9BSF0 95 aa16.92■□□□□ 0.3
U2AF1-204ENST00000459639 GAGE6Q13070 117 aa16.91■□□□□ 0.3
U2AF1-204ENST00000459639 RNASE13Q5GAN3 156 aaKnown RBP16.91■□□□□ 0.3
U2AF1-204ENST00000459639 TRAV10A0A0B4J240 114 aa16.91■□□□□ 0.3
U2AF1-204ENST00000459639 IGLC3P0DOY3 106 aa16.91■□□□□ 0.3
U2AF1-204ENST00000459639 ANKRD39Q53RE8 183 aa16.91■□□□□ 0.3
U2AF1-204ENST00000459639 NFE4Q86UQ8 179 aa16.91■□□□□ 0.3
U2AF1-204ENST00000459639 C11orf86A6NJI1 115 aa16.9■□□□□ 0.3
U2AF1-204ENST00000459639 CDC42SE2Q9NRR3 84 aa16.9■□□□□ 0.3
U2AF1-204ENST00000459639 HUWE1Q7Z6Z7 4374 aaKnown RBP16.88■□□□□ 0.29
U2AF1-204ENST00000459639 MIEN1Q9BRT3 115 aa16.88■□□□□ 0.29
U2AF1-204ENST00000459639 CHAC1Q9BUX1 264 aa16.88■□□□□ 0.29
U2AF1-204ENST00000459639 NHLRC4P0CG21 123 aaPredicted RBP16.87■□□□□ 0.29
U2AF1-204ENST00000459639 DDTP30046 118 aa16.87■□□□□ 0.29
U2AF1-204ENST00000459639 TIRAPP58753 221 aa16.87■□□□□ 0.29
U2AF1-204ENST00000459639 LELP1Q5T871 98 aa16.87■□□□□ 0.29
U2AF1-204ENST00000459639 UQCR10Q9UDW1 63 aa16.87■□□□□ 0.29
U2AF1-204ENST00000459639 A0A0J9YXV3 536 aa16.86■□□□□ 0.29
U2AF1-204ENST00000459639 C14orf144Q96I85 54 aa16.86■□□□□ 0.29
U2AF1-204ENST00000459639 DNHD1Q96M86 4753 aa16.85■□□□□ 0.29
U2AF1-204ENST00000459639 UBE2D1P51668 147 aa16.85■□□□□ 0.29
U2AF1-204ENST00000459639 A0A1B0GUV1 79 aa16.85■□□□□ 0.29
U2AF1-204ENST00000459639 TINCRA0A1B0GVN0 87 aa16.83■□□□□ 0.28
U2AF1-204ENST00000459639 DEFA6Q01524 100 aa16.83■□□□□ 0.28
U2AF1-204ENST00000459639 LYPD5Q6UWN5 251 aa16.83■□□□□ 0.28
U2AF1-204ENST00000459639 IGLV4-60A0A075B6I1 120 aa16.82■□□□□ 0.28
U2AF1-204ENST00000459639 COX8AP10176 69 aa16.82■□□□□ 0.28
U2AF1-204ENST00000459639 TMEM262E9PQX1 116 aa16.81■□□□□ 0.28
U2AF1-204ENST00000459639 ZNF22P17026 224 aaPredicted RBP16.81■□□□□ 0.28
U2AF1-204ENST00000459639 TCTAP57738 103 aa16.81■□□□□ 0.28
U2AF1-204ENST00000459639 TMEM170BQ5T4T1 132 aa16.81■□□□□ 0.28
U2AF1-204ENST00000459639 FAM19A3Q7Z5A8 133 aa16.81■□□□□ 0.28
U2AF1-204ENST00000459639 NMUP48645 174 aa16.81■□□□□ 0.28
U2AF1-204ENST00000459639 HERVK_113P61574 105 aa16.81■□□□□ 0.28
U2AF1-204ENST00000459639 RBX1P62877 108 aa16.81■□□□□ 0.28
U2AF1-204ENST00000459639 MPV17L2Q567V2 206 aa16.81■□□□□ 0.28
U2AF1-204ENST00000459639 SLC25A34Q6PIV7 304 aa16.81■□□□□ 0.28
U2AF1-204ENST00000459639 IGKV2D-26A0A0A0MRZ7 120 aa16.8■□□□□ 0.28
U2AF1-204ENST00000459639 E9PLD3 99 aa16.79■□□□□ 0.28
U2AF1-204ENST00000459639 SEC11AP67812 179 aa16.79■□□□□ 0.28
U2AF1-204ENST00000459639 C15orf53Q8NAA6 179 aa16.79■□□□□ 0.28
U2AF1-204ENST00000459639 DNAH9Q9NYC9 4486 aa16.78■□□□□ 0.28
U2AF1-204ENST00000459639 GEMIN7Q9H840 131 aaKnown RBP16.78■□□□□ 0.28
U2AF1-204ENST00000459639 TRAV13-1A0A0B4J241 112 aa16.77■□□□□ 0.28
U2AF1-204ENST00000459639 TRAV8-6A0A0B4J262 113 aa16.76■□□□□ 0.27
U2AF1-204ENST00000459639 TMEM223A0PJW6 202 aa16.76■□□□□ 0.27
U2AF1-204ENST00000459639 LINC00587B1AMM8 73 aa16.76■□□□□ 0.27
U2AF1-204ENST00000459639 HERVK_113P63121 156 aa16.76■□□□□ 0.27
U2AF1-204ENST00000459639 LINC00242Q5T6M2 205 aa16.76■□□□□ 0.27
U2AF1-204ENST00000459639 IGLV5-45A0A087WSX0 123 aa16.75■□□□□ 0.27
U2AF1-204ENST00000459639 DLEU1O43261 78 aa16.75■□□□□ 0.27
U2AF1-204ENST00000459639 BOD1L2Q8IYS8 172 aa16.75■□□□□ 0.27
U2AF1-204ENST00000459639 PCP2Q8IVA1 136 aa16.75■□□□□ 0.27
U2AF1-204ENST00000459639 HNRNPA3P51991 378 aaKnown RBP16.74■□□□□ 0.27
U2AF1-204ENST00000459639 LINC00469Q8N7U9 141 aa16.73■□□□□ 0.27
U2AF1-204ENST00000459639 TP73-AS1Q9UF72 201 aa16.73■□□□□ 0.27
U2AF1-204ENST00000459639 ESRGQ1W209 222 aa16.72■□□□□ 0.27
U2AF1-204ENST00000459639 COL7A1Q02388 2944 aa16.72■□□□□ 0.27
U2AF1-204ENST00000459639 COX6A2Q02221 97 aa16.71■□□□□ 0.27
U2AF1-204ENST00000459639 H3BRM9 83 aa16.7■□□□□ 0.26
U2AF1-204ENST00000459639 CDKN2A-AS1Q9UH64 79 aa16.7■□□□□ 0.26
U2AF1-204ENST00000459639 IGKV3OR2-268A0A0C4DH90 116 aa16.69■□□□□ 0.26
U2AF1-204ENST00000459639 LEPROTO15243 131 aa16.69■□□□□ 0.26
U2AF1-204ENST00000459639 ANGP03950 147 aaKnown RBP16.69■□□□□ 0.26
U2AF1-204ENST00000459639 Q8N3U1 123 aa16.69■□□□□ 0.26
U2AF1-204ENST00000459639 TTTY13Q9BZ97 58 aa16.69■□□□□ 0.26
U2AF1-204ENST00000459639 MRPS16Q9Y3D3 137 aaKnown RBP16.69■□□□□ 0.26
U2AF1-204ENST00000459639 LINC00959A0A1B0GUT2 108 aa16.68■□□□□ 0.26
U2AF1-204ENST00000459639 STAB2Q8WWQ8 2551 aa16.67■□□□□ 0.26
U2AF1-204ENST00000459639 IGLL5B9A064 214 aa16.67■□□□□ 0.26
U2AF1-204ENST00000459639 CCL25O15444 150 aa16.67■□□□□ 0.26
U2AF1-204ENST00000459639 WFDC10BQ8IUB3 73 aa16.67■□□□□ 0.26
U2AF1-204ENST00000459639 SIVA1O15304 175 aa16.66■□□□□ 0.26
U2AF1-204ENST00000459639 LINC00269Q8N2A0 174 aa16.66■□□□□ 0.26
U2AF1-204ENST00000459639 PLEKHB2Q96CS7 222 aa16.66■□□□□ 0.26
U2AF1-204ENST00000459639 IGHV1-58A0A0C4DH39 117 aa16.65■□□□□ 0.26
U2AF1-204ENST00000459639 SS18Q15532 418 aa16.65■□□□□ 0.26
U2AF1-204ENST00000459639 C2orf91Q6ZV80 131 aa16.65■□□□□ 0.26
U2AF1-204ENST00000459639 MAPKAPK5-AS1Q8N8E1 139 aa16.65■□□□□ 0.26
U2AF1-204ENST00000459639 MEGF8Q7Z7M0 2845 aa16.65■□□□□ 0.26
U2AF1-204ENST00000459639 J3QQQ9 107 aa16.65■□□□□ 0.26
U2AF1-204ENST00000459639 IGHV3-64A0A075B6Q5 118 aa16.64■□□□□ 0.25
U2AF1-204ENST00000459639 MYMXA0A1B0GTQ4 84 aa16.64■□□□□ 0.25
U2AF1-204ENST00000459639 SPINK8P0C7L1 97 aa16.64■□□□□ 0.25
U2AF1-204ENST00000459639 TSPEAR-AS2P59090 65 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms