RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 ST20Q9HBF5 79 aa13.43□□□□□ -0.26
CPNE1-220ENST00000458038 LRP2P98164 4655 aa13.43□□□□□ -0.26
CPNE1-220ENST00000458038 ZNF561-AS1K7EIQ3 104 aa13.42□□□□□ -0.26
CPNE1-220ENST00000458038 CT83Q5H943 113 aa13.42□□□□□ -0.26
CPNE1-220ENST00000458038 CD164L2Q6UWJ8 174 aa13.42□□□□□ -0.26
CPNE1-220ENST00000458038 Q6ZRP5 223 aa13.42□□□□□ -0.26
CPNE1-220ENST00000458038 MRPL52Q86TS9 123 aaKnown RBP13.42□□□□□ -0.26
CPNE1-220ENST00000458038 BORCS7Q96B45 105 aa13.42□□□□□ -0.26
CPNE1-220ENST00000458038 SYCNQ0VAF6 134 aa13.41□□□□□ -0.26
CPNE1-220ENST00000458038 TSHBP01222 138 aa13.4□□□□□ -0.26
CPNE1-220ENST00000458038 KRTAP10-8P60410 259 aa13.4□□□□□ -0.26
CPNE1-220ENST00000458038 TCTE3Q8IZS6 198 aa13.4□□□□□ -0.26
CPNE1-220ENST00000458038 ISOC2Q96AB3 205 aa13.4□□□□□ -0.26
CPNE1-220ENST00000458038 CDC42SE2Q9NRR3 84 aa13.4□□□□□ -0.26
CPNE1-220ENST00000458038 SRSF9Q13242 221 aaKnown RBP eCLIP13.39□□□□□ -0.27
CPNE1-220ENST00000458038 TRBV27A0A0K0K1C4 114 aa13.38□□□□□ -0.27
CPNE1-220ENST00000458038 POLR2KP53803 58 aaKnown RBP13.38□□□□□ -0.27
CPNE1-220ENST00000458038 SMAGPQ0VAQ4 97 aa13.38□□□□□ -0.27
CPNE1-220ENST00000458038 ZNF664Q8N3J9 261 aa13.38□□□□□ -0.27
CPNE1-220ENST00000458038 TMEM191AQ9H0A3 160 aa13.38□□□□□ -0.27
CPNE1-220ENST00000458038 A0A1B0GUT8 65 aa13.37□□□□□ -0.27
CPNE1-220ENST00000458038 LINC00526Q96FQ7 95 aa13.37□□□□□ -0.27
CPNE1-220ENST00000458038 TMEM242Q9NWH2 141 aa13.37□□□□□ -0.27
CPNE1-220ENST00000458038 LOC107984640A0A0U1RRK4 108 aa13.36□□□□□ -0.27
CPNE1-220ENST00000458038 C7orf77A4D0Y5 90 aa13.36□□□□□ -0.27
CPNE1-220ENST00000458038 C1orf196B1AJZ1 125 aa13.36□□□□□ -0.27
CPNE1-220ENST00000458038 CAMPP49913 170 aa13.36□□□□□ -0.27
CPNE1-220ENST00000458038 PTTG1IPP53801 180 aa13.36□□□□□ -0.27
CPNE1-220ENST00000458038 BLOC1S1P78537 153 aa13.36□□□□□ -0.27
CPNE1-220ENST00000458038 CSDC2Q9Y534 153 aaKnown RBP13.35□□□□□ -0.27
CPNE1-220ENST00000458038 PPP1R17O96001 155 aa13.34□□□□□ -0.27
CPNE1-220ENST00000458038 MALP21145 153 aa13.34□□□□□ -0.27
CPNE1-220ENST00000458038 TSKUQ8WUA8 353 aa13.34□□□□□ -0.27
CPNE1-220ENST00000458038 HIGD1CA8MV81 97 aa13.33□□□□□ -0.28
CPNE1-220ENST00000458038 COX7A2LO14548 114 aa13.33□□□□□ -0.28
CPNE1-220ENST00000458038 VCYO14598 125 aa13.33□□□□□ -0.28
CPNE1-220ENST00000458038 RAB4AP20338 218 aa13.33□□□□□ -0.28
CPNE1-220ENST00000458038 IGLV4-69A0A075B6H9 119 aa13.32□□□□□ -0.28
CPNE1-220ENST00000458038 GAS8-AS1O95177 125 aa13.32□□□□□ -0.28
CPNE1-220ENST00000458038 FCER1GP30273 86 aa13.31□□□□□ -0.28
CPNE1-220ENST00000458038 GAGE2BQ13066 116 aa13.31□□□□□ -0.28
CPNE1-220ENST00000458038 C2orf48Q96LS8 159 aa13.3□□□□□ -0.28
CPNE1-220ENST00000458038 APOMO95445 188 aa13.29□□□□□ -0.28
CPNE1-220ENST00000458038 NUP35Q8NFH5 326 aa13.29□□□□□ -0.28
CPNE1-220ENST00000458038 CAMK2N2Q96S95 79 aa13.29□□□□□ -0.28
CPNE1-220ENST00000458038 KIR2DL4Q99706 377 aa13.29□□□□□ -0.28
CPNE1-220ENST00000458038 SMIM7Q9BQ49 75 aa13.29□□□□□ -0.28
CPNE1-220ENST00000458038 OSTCQ9NRP0 149 aa13.29□□□□□ -0.28
CPNE1-220ENST00000458038 CEBPGP53567 150 aa13.28□□□□□ -0.28
CPNE1-220ENST00000458038 LINC01551Q86U37 167 aa13.28□□□□□ -0.28
CPNE1-220ENST00000458038 AMN1Q8IY45 258 aa13.28□□□□□ -0.28
CPNE1-220ENST00000458038 RIGQ13278 110 aa13.27□□□□□ -0.29
CPNE1-220ENST00000458038 ODF1Q14990 250 aa13.27□□□□□ -0.29
CPNE1-220ENST00000458038 TMEM18Q96B42 140 aa13.27□□□□□ -0.29
CPNE1-220ENST00000458038 PPP1R2P9O14990 202 aa13.26□□□□□ -0.29
CPNE1-220ENST00000458038 SUMO2P61956 95 aaKnown RBP13.26□□□□□ -0.29
CPNE1-220ENST00000458038 RNF151Q2KHN1 245 aa13.26□□□□□ -0.29
CPNE1-220ENST00000458038 TIMM21Q9BVV7 248 aa13.26□□□□□ -0.29
CPNE1-220ENST00000458038 UBE2D4Q9Y2X8 147 aa13.26□□□□□ -0.29
CPNE1-220ENST00000458038 A0A1W2PNN7 141 aa13.25□□□□□ -0.29
CPNE1-220ENST00000458038 ALKAL2Q6UX46 152 aa13.25□□□□□ -0.29
CPNE1-220ENST00000458038 EIF5A2Q9GZV4 153 aaKnown RBP13.25□□□□□ -0.29
CPNE1-220ENST00000458038 TRAV13-1A0A0B4J241 112 aa13.24□□□□□ -0.29
CPNE1-220ENST00000458038 MT-ND6P03923 174 aa13.24□□□□□ -0.29
CPNE1-220ENST00000458038 ZNF727A8MUV8 499 aa13.23□□□□□ -0.29
CPNE1-220ENST00000458038 F8WDY8 70 aa13.23□□□□□ -0.29
CPNE1-220ENST00000458038 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.23□□□□□ -0.29
CPNE1-220ENST00000458038 TCAPO15273 167 aa13.23□□□□□ -0.29
CPNE1-220ENST00000458038 C9orf116Q5BN46 136 aaPredicted RBP13.23□□□□□ -0.29
CPNE1-220ENST00000458038 NRACQ8N912 160 aa13.23□□□□□ -0.29
CPNE1-220ENST00000458038 PSORS1C2Q9UIG4 136 aa13.23□□□□□ -0.29
CPNE1-220ENST00000458038 RNF213Q63HN8 5207 aa13.22□□□□□ -0.29
CPNE1-220ENST00000458038 OR10D4PQ8NGN7 298 aa13.22□□□□□ -0.29
CPNE1-220ENST00000458038 SMKR1H3BMG3 65 aa13.21□□□□□ -0.29
CPNE1-220ENST00000458038 RPL18AQ02543 176 aaKnown RBP13.21□□□□□ -0.29
CPNE1-220ENST00000458038 C5orf38Q86SI9 138 aa13.21□□□□□ -0.29
CPNE1-220ENST00000458038 LINC00862A6NCI5 91 aa13.2□□□□□ -0.3
CPNE1-220ENST00000458038 C20orf78Q9BR46 151 aa13.2□□□□□ -0.3
CPNE1-220ENST00000458038 NAT8BQ9UHF3 227 aa13.2□□□□□ -0.3
CPNE1-220ENST00000458038 V9GYV3 84 aa13.2□□□□□ -0.3
CPNE1-220ENST00000458038 RPL32P62910 135 aaKnown RBP13.19□□□□□ -0.3
CPNE1-220ENST00000458038 SPAG11BQ08648 103 aa13.19□□□□□ -0.3
CPNE1-220ENST00000458038 RNASE13Q5GAN3 156 aaKnown RBP13.19□□□□□ -0.3
CPNE1-220ENST00000458038 IMMP2LQ96T52 175 aa13.19□□□□□ -0.3
CPNE1-220ENST00000458038 C1orf137Q5JT78 98 aa13.18□□□□□ -0.3
CPNE1-220ENST00000458038 FAM104BQ5XKR9 115 aa13.18□□□□□ -0.3
CPNE1-220ENST00000458038 Q6ZUT4 128 aa13.18□□□□□ -0.3
CPNE1-220ENST00000458038 MRPL35Q9NZE8 188 aaKnown RBP13.18□□□□□ -0.3
CPNE1-220ENST00000458038 TRBV24-1A0A075B6N3 115 aa13.17□□□□□ -0.3
CPNE1-220ENST00000458038 A0A1B0GW15 77 aa13.16□□□□□ -0.3
CPNE1-220ENST00000458038 SRP19P09132 144 aaKnown RBP13.16□□□□□ -0.3
CPNE1-220ENST00000458038 TMEM241Q24JQ0 296 aa13.16□□□□□ -0.3
CPNE1-220ENST00000458038 MRPL51Q4U2R6 128 aaKnown RBP13.16□□□□□ -0.3
CPNE1-220ENST00000458038 FAM74A3Q4VXF1 159 aa13.16□□□□□ -0.3
CPNE1-220ENST00000458038 AKAP14Q86UN6 197 aa13.16□□□□□ -0.3
CPNE1-220ENST00000458038 DIRC1Q969H9 104 aa13.16□□□□□ -0.3
CPNE1-220ENST00000458038 OPRPNQ99935 248 aaPredicted RBP13.16□□□□□ -0.3
CPNE1-220ENST00000458038 PHF5AQ7RTV0 110 aaKnown RBP13.15□□□□□ -0.3
CPNE1-220ENST00000458038 SPANXA1Q9NS26 97 aa13.15□□□□□ -0.3
CPNE1-220ENST00000458038 NDUFA1O15239 70 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms