RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 ZNF25P17030 456 aaPredicted RBP10.04□□□□□ -0.8
CHCHD3-204ENST00000457942 AMN1Q8IY45 258 aa10.04□□□□□ -0.8
CHCHD3-204ENST00000457942 OR5A1Q8NGJ0 315 aa10.04□□□□□ -0.8
CHCHD3-204ENST00000457942 MRAP2Q96G30 205 aa10.04□□□□□ -0.8
CHCHD3-204ENST00000457942 NAT8BQ9UHF3 227 aa10.04□□□□□ -0.8
CHCHD3-204ENST00000457942 A0A087WYN8 130 aa10.03□□□□□ -0.8
CHCHD3-204ENST00000457942 RPS10P46783 165 aaKnown RBP10.03□□□□□ -0.8
CHCHD3-204ENST00000457942 XCL1P47992 114 aa10.03□□□□□ -0.8
CHCHD3-204ENST00000457942 RIGQ13278 110 aa10.03□□□□□ -0.8
CHCHD3-204ENST00000457942 CIRBPQ14011 172 aaKnown RBP10.03□□□□□ -0.8
CHCHD3-204ENST00000457942 MRPL54Q6P161 138 aaKnown RBP10.03□□□□□ -0.8
CHCHD3-204ENST00000457942 SPACA4Q8TDM5 124 aa10.03□□□□□ -0.8
CHCHD3-204ENST00000457942 RNF185Q96GF1 192 aa10.03□□□□□ -0.8
CHCHD3-204ENST00000457942 IGKV2-24A0A0C4DH68 120 aa10.02□□□□□ -0.81
CHCHD3-204ENST00000457942 TRBV6-5A0A0K0K1A5 114 aa10.02□□□□□ -0.81
CHCHD3-204ENST00000457942 SMIM27A0A1W2PRY6 76 aa10.02□□□□□ -0.81
CHCHD3-204ENST00000457942 FAM231BA6NCW3 169 aa10.02□□□□□ -0.81
CHCHD3-204ENST00000457942 SMKR1H3BMG3 65 aa10.02□□□□□ -0.81
CHCHD3-204ENST00000457942 CAMPP49913 170 aa10.02□□□□□ -0.81
CHCHD3-204ENST00000457942 COX6A2Q02221 97 aa10.02□□□□□ -0.81
CHCHD3-204ENST00000457942 COMMD7Q86VX2 200 aa10.02□□□□□ -0.81
CHCHD3-204ENST00000457942 TMEM191AQ9H0A3 160 aa10.02□□□□□ -0.81
CHCHD3-204ENST00000457942 TSHBP01222 138 aa10.01□□□□□ -0.81
CHCHD3-204ENST00000457942 MT1HL1P0DM35 61 aa10.01□□□□□ -0.81
CHCHD3-204ENST00000457942 ADCYAP1P18509 176 aa10.01□□□□□ -0.81
CHCHD3-204ENST00000457942 C7orf33Q8WU49 177 aa10.01□□□□□ -0.81
CHCHD3-204ENST00000457942 GVQW2A0A096LPI5 108 aaPredicted RBP10□□□□□ -0.81
CHCHD3-204ENST00000457942 CCL25O15444 150 aa10□□□□□ -0.81
CHCHD3-204ENST00000457942 RAB4AP20338 218 aa10□□□□□ -0.81
CHCHD3-204ENST00000457942 MAJINQ3KP22 176 aa10□□□□□ -0.81
CHCHD3-204ENST00000457942 TNXBP22105 4242 aa10□□□□□ -0.81
CHCHD3-204ENST00000457942 C7orf77A4D0Y5 90 aa9.99□□□□□ -0.81
CHCHD3-204ENST00000457942 FCER1GP30273 86 aa9.99□□□□□ -0.81
CHCHD3-204ENST00000457942 FOXI1Q12951 378 aa9.99□□□□□ -0.81
CHCHD3-204ENST00000457942 SS18Q15532 418 aa9.99□□□□□ -0.81
CHCHD3-204ENST00000457942 PRSS3P2Q8NHM4 247 aa9.99□□□□□ -0.81
CHCHD3-204ENST00000457942 LINC00959A0A1B0GUT2 108 aa9.98□□□□□ -0.81
CHCHD3-204ENST00000457942 F8W036 122 aa9.98□□□□□ -0.81
CHCHD3-204ENST00000457942 ESDP10768 282 aa9.98□□□□□ -0.81
CHCHD3-204ENST00000457942 PNRC1Q12796 327 aaPredicted RBP9.98□□□□□ -0.81
CHCHD3-204ENST00000457942 IGHV1-58A0A0C4DH39 117 aa9.97□□□□□ -0.81
CHCHD3-204ENST00000457942 PHOX2AO14813 284 aa9.97□□□□□ -0.81
CHCHD3-204ENST00000457942 UQCC3Q6UW78 93 aa9.97□□□□□ -0.81
CHCHD3-204ENST00000457942 PLAC8Q9NZF1 115 aa9.97□□□□□ -0.81
CHCHD3-204ENST00000457942 PKIGQ9Y2B9 76 aa9.97□□□□□ -0.81
CHCHD3-204ENST00000457942 TRBV27A0A0K0K1C4 114 aa9.96□□□□□ -0.82
CHCHD3-204ENST00000457942 TMEM218A2RU14 115 aa9.96□□□□□ -0.82
CHCHD3-204ENST00000457942 POLR2KP53803 58 aaKnown RBP9.96□□□□□ -0.82
CHCHD3-204ENST00000457942 MRPL51Q4U2R6 128 aaKnown RBP9.96□□□□□ -0.82
CHCHD3-204ENST00000457942 ZNF664Q8N3J9 261 aa9.96□□□□□ -0.82
CHCHD3-204ENST00000457942 STPG4Q8N801 248 aa9.96□□□□□ -0.82
CHCHD3-204ENST00000457942 LINC00526Q96FQ7 95 aa9.96□□□□□ -0.82
CHCHD3-204ENST00000457942 CARD19Q96LW7 228 aa9.96□□□□□ -0.82
CHCHD3-204ENST00000457942 ZNF561-AS1K7EIQ3 104 aa9.95□□□□□ -0.82
CHCHD3-204ENST00000457942 VCYO14598 125 aa9.95□□□□□ -0.82
CHCHD3-204ENST00000457942 PPP1R2P9O14990 202 aa9.95□□□□□ -0.82
CHCHD3-204ENST00000457942 PPP1R17O96001 155 aa9.95□□□□□ -0.82
CHCHD3-204ENST00000457942 MT-ND4LP03901 98 aa9.95□□□□□ -0.82
CHCHD3-204ENST00000457942 HBBP68871 147 aa9.95□□□□□ -0.82
CHCHD3-204ENST00000457942 SMAGPQ0VAQ4 97 aa9.95□□□□□ -0.82
CHCHD3-204ENST00000457942 ODF1Q14990 250 aa9.95□□□□□ -0.82
CHCHD3-204ENST00000457942 Q6ZRU5 148 aa9.95□□□□□ -0.82
CHCHD3-204ENST00000457942 MRPL52Q86TS9 123 aaKnown RBP9.95□□□□□ -0.82
CHCHD3-204ENST00000457942 KIR2DL4Q99706 377 aa9.95□□□□□ -0.82
CHCHD3-204ENST00000457942 CDC42SE2Q9NRR3 84 aa9.95□□□□□ -0.82
CHCHD3-204ENST00000457942 A0A096LNI7 61 aa9.94□□□□□ -0.82
CHCHD3-204ENST00000457942 A0A1B0GXF2 115 aa9.94□□□□□ -0.82
CHCHD3-204ENST00000457942 MALP21145 153 aa9.94□□□□□ -0.82
CHCHD3-204ENST00000457942 SUMO2P61956 95 aaKnown RBP9.94□□□□□ -0.82
CHCHD3-204ENST00000457942 FAM104BQ5XKR9 115 aa9.94□□□□□ -0.82
CHCHD3-204ENST00000457942 CD164L2Q6UWJ8 174 aa9.94□□□□□ -0.82
CHCHD3-204ENST00000457942 ANAPC16Q96DE5 110 aa9.94□□□□□ -0.82
CHCHD3-204ENST00000457942 NRACQ8N912 160 aa9.93□□□□□ -0.82
CHCHD3-204ENST00000457942 RNASE13Q5GAN3 156 aaKnown RBP9.92□□□□□ -0.82
CHCHD3-204ENST00000457942 LINC00474Q9P2X8 69 aa9.92□□□□□ -0.82
CHCHD3-204ENST00000457942 A0A1B0GW15 77 aa9.91□□□□□ -0.82
CHCHD3-204ENST00000457942 LINC00862A6NCI5 91 aa9.91□□□□□ -0.82
CHCHD3-204ENST00000457942 C1orf196B1AJZ1 125 aa9.91□□□□□ -0.82
CHCHD3-204ENST00000457942 D6R8Y8 96 aa9.91□□□□□ -0.82
CHCHD3-204ENST00000457942 S100A8P05109 93 aa9.91□□□□□ -0.82
CHCHD3-204ENST00000457942 CKS2P33552 79 aa9.91□□□□□ -0.82
CHCHD3-204ENST00000457942 SYCNQ0VAF6 134 aa9.91□□□□□ -0.82
CHCHD3-204ENST00000457942 TMEM18Q96B42 140 aa9.91□□□□□ -0.82
CHCHD3-204ENST00000457942 TRAV13-1A0A0B4J241 112 aa9.9□□□□□ -0.82
CHCHD3-204ENST00000457942 COX7A2LO14548 114 aa9.9□□□□□ -0.82
CHCHD3-204ENST00000457942 SEC11CQ9BY50 192 aa9.9□□□□□ -0.82
CHCHD3-204ENST00000457942 UBE2D4Q9Y2X8 147 aa9.9□□□□□ -0.82
CHCHD3-204ENST00000457942 NPYP01303 97 aa9.89□□□□□ -0.83
CHCHD3-204ENST00000457942 PRR3P79522 188 aaKnown RBP9.89□□□□□ -0.83
CHCHD3-204ENST00000457942 Q6ZUT4 128 aa9.89□□□□□ -0.83
CHCHD3-204ENST00000457942 ATP5L2Q7Z4Y8 100 aa9.89□□□□□ -0.83
CHCHD3-204ENST00000457942 IGLV4-69A0A075B6H9 119 aa9.87□□□□□ -0.83
CHCHD3-204ENST00000457942 TNFRSF6BO95407 300 aa9.87□□□□□ -0.83
CHCHD3-204ENST00000457942 GAGE2BQ13066 116 aa9.87□□□□□ -0.83
CHCHD3-204ENST00000457942 CAMK2N2Q96S95 79 aa9.87□□□□□ -0.83
CHCHD3-204ENST00000457942 CSDC2Q9Y534 153 aaKnown RBP9.87□□□□□ -0.83
CHCHD3-204ENST00000457942 APOMO95445 188 aa9.86□□□□□ -0.83
CHCHD3-204ENST00000457942 C5orf38Q86SI9 138 aa9.86□□□□□ -0.83
CHCHD3-204ENST00000457942 C20orf78Q9BR46 151 aa9.86□□□□□ -0.83
CHCHD3-204ENST00000457942 LOC107984640A0A0U1RRK4 108 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms