RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, human

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDLIM2-215	ENST00000456545	ORMDL3	Q8N138	153 aa		11.8	□□□□□ -0.52
PDLIM2-215	ENST00000456545	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.8	□□□□□ -0.52
PDLIM2-215	ENST00000456545	KRTAP4-5	Q9BYR2	181 aa		11.8	□□□□□ -0.52
PDLIM2-215	ENST00000456545	FAM30A	Q9NZY2	134 aa		11.8	□□□□□ -0.52
PDLIM2-215	ENST00000456545	PHOX2A	O14813	284 aa		11.79	□□□□□ -0.52
PDLIM2-215	ENST00000456545	SMR3B	P02814	79 aa	Predicted RBP	11.79	□□□□□ -0.52
PDLIM2-215	ENST00000456545	SS18	Q15532	418 aa		11.79	□□□□□ -0.52
PDLIM2-215	ENST00000456545	MRPL52	Q86TS9	123 aa	Known RBP	11.79	□□□□□ -0.52
PDLIM2-215	ENST00000456545	ZNF664	Q8N3J9	261 aa		11.79	□□□□□ -0.52
PDLIM2-215	ENST00000456545	PRELID3A	Q96N28	172 aa		11.79	□□□□□ -0.52
PDLIM2-215	ENST00000456545	NPY	P01303	97 aa		11.78	□□□□□ -0.52
PDLIM2-215	ENST00000456545	RPL32	P62910	135 aa	Known RBP	11.78	□□□□□ -0.52
PDLIM2-215	ENST00000456545	SMIM2	Q9BVW6	85 aa		11.78	□□□□□ -0.52
PDLIM2-215	ENST00000456545	SEC11C	Q9BY50	192 aa		11.78	□□□□□ -0.52
PDLIM2-215	ENST00000456545	CTDSP1	Q9GZU7	261 aa		11.78	□□□□□ -0.52
PDLIM2-215	ENST00000456545	CDC42SE2	Q9NRR3	84 aa		11.78	□□□□□ -0.52
PDLIM2-215	ENST00000456545	LINC00959	A0A1B0GUT2	108 aa		11.77	□□□□□ -0.53
PDLIM2-215	ENST00000456545	FAM229A	H3BQW9	127 aa		11.77	□□□□□ -0.53
PDLIM2-215	ENST00000456545	ADCYAP1	P18509	176 aa		11.77	□□□□□ -0.53
PDLIM2-215	ENST00000456545	RAB5A	P20339	215 aa		11.77	□□□□□ -0.53
PDLIM2-215	ENST00000456545	IMMP2L	Q96T52	175 aa		11.77	□□□□□ -0.53
PDLIM2-215	ENST00000456545	KRTAP17-1	Q9BYP8	105 aa		11.77	□□□□□ -0.53
PDLIM2-215	ENST00000456545	HSPG2	P98160	4391 aa		11.77	□□□□□ -0.53
PDLIM2-215	ENST00000456545	APOB	P04114	4563 aa	Known RBP	11.76	□□□□□ -0.53
PDLIM2-215	ENST00000456545	XCL1	P47992	114 aa		11.76	□□□□□ -0.53
PDLIM2-215	ENST00000456545	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.75	□□□□□ -0.53
PDLIM2-215	ENST00000456545	CCL25	O15444	150 aa		11.75	□□□□□ -0.53
PDLIM2-215	ENST00000456545	S100P	P25815	95 aa		11.75	□□□□□ -0.53
PDLIM2-215	ENST00000456545	UBE2D4	Q9Y2X8	147 aa		11.75	□□□□□ -0.53
PDLIM2-215	ENST00000456545	LOC389332	A0A1B0GUA5	103 aa		11.74	□□□□□ -0.53
PDLIM2-215	ENST00000456545	C9orf163	Q8N9P6	203 aa		11.74	□□□□□ -0.53
PDLIM2-215	ENST00000456545	MAP1LC3A	Q9H492	121 aa		11.74	□□□□□ -0.53
PDLIM2-215	ENST00000456545	CSDC2	Q9Y534	153 aa	Known RBP	11.74	□□□□□ -0.53
PDLIM2-215	ENST00000456545		Q5VSD8	79 aa		11.73	□□□□□ -0.53
PDLIM2-215	ENST00000456545		Q6ZSA8	131 aa		11.73	□□□□□ -0.53
PDLIM2-215	ENST00000456545	LAMTOR2	Q9Y2Q5	125 aa		11.73	□□□□□ -0.53
PDLIM2-215	ENST00000456545	RNASE13	Q5GAN3	156 aa	Known RBP	11.72	□□□□□ -0.53
PDLIM2-215	ENST00000456545	TIMM21	Q9BVV7	248 aa		11.72	□□□□□ -0.53
PDLIM2-215	ENST00000456545	C1orf196	B1AJZ1	125 aa		11.71	□□□□□ -0.53
PDLIM2-215	ENST00000456545	RPL39	P62891	51 aa	Known RBP	11.71	□□□□□ -0.53
PDLIM2-215	ENST00000456545	FOXI1	Q12951	378 aa		11.71	□□□□□ -0.53
PDLIM2-215	ENST00000456545	HIGD2B	Q4VC39	106 aa		11.71	□□□□□ -0.53
PDLIM2-215	ENST00000456545	TRAV9-1	A0A075B6T8	112 aa		11.7	□□□□□ -0.54
PDLIM2-215	ENST00000456545	TRAV13-1	A0A0B4J241	112 aa		11.7	□□□□□ -0.54
PDLIM2-215	ENST00000456545	CNBP	P62633	177 aa	Known RBP	11.7	□□□□□ -0.54
PDLIM2-215	ENST00000456545	CD164L2	Q6UWJ8	174 aa		11.7	□□□□□ -0.54
PDLIM2-215	ENST00000456545	C15orf56	Q8N910	161 aa		11.7	□□□□□ -0.54
PDLIM2-215	ENST00000456545	DPH3	Q96FX2	82 aa		11.7	□□□□□ -0.54
PDLIM2-215	ENST00000456545	CHAC1	Q9BUX1	264 aa		11.7	□□□□□ -0.54
PDLIM2-215	ENST00000456545	IGHV3-64	A0A075B6Q5	118 aa		11.69	□□□□□ -0.54
PDLIM2-215	ENST00000456545	MAL	P21145	153 aa		11.69	□□□□□ -0.54
PDLIM2-215	ENST00000456545	SCX	Q7RTU7	201 aa		11.69	□□□□□ -0.54
PDLIM2-215	ENST00000456545	RPS10P5	Q9NQ39	176 aa		11.69	□□□□□ -0.54
PDLIM2-215	ENST00000456545	SPANXA1	Q9NS26	97 aa		11.69	□□□□□ -0.54
PDLIM2-215	ENST00000456545	PCLO	Q9Y6V0	5065 aa		11.68	□□□□□ -0.54
PDLIM2-215	ENST00000456545	IGHV1-58	A0A0C4DH39	117 aa		11.68	□□□□□ -0.54
PDLIM2-215	ENST00000456545		Q6ZUT4	128 aa		11.68	□□□□□ -0.54
PDLIM2-215	ENST00000456545	PRSS47	A8MTI9	375 aa		11.67	□□□□□ -0.54
PDLIM2-215	ENST00000456545	IFI27	P40305	119 aa	Predicted RBP	11.67	□□□□□ -0.54
PDLIM2-215	ENST00000456545		Q8N8P6	123 aa		11.67	□□□□□ -0.54
PDLIM2-215	ENST00000456545	ZNF561-AS1	K7EIQ3	104 aa		11.66	□□□□□ -0.54
PDLIM2-215	ENST00000456545	INAFM2	P0DMQ5	153 aa		11.66	□□□□□ -0.54
PDLIM2-215	ENST00000456545	RHEB	Q15382	184 aa		11.66	□□□□□ -0.54
PDLIM2-215	ENST00000456545	CIRBP-AS1	Q8TBR5	109 aa		11.66	□□□□□ -0.54
PDLIM2-215	ENST00000456545	CARHSP1	Q9Y2V2	147 aa	Known RBP	11.66	□□□□□ -0.54
PDLIM2-215	ENST00000456545	GVQW2	A0A096LPI5	108 aa	Predicted RBP	11.65	□□□□□ -0.54
PDLIM2-215	ENST00000456545	COX7A2L	O14548	114 aa		11.65	□□□□□ -0.54
PDLIM2-215	ENST00000456545	SLPI	P03973	132 aa		11.65	□□□□□ -0.54
PDLIM2-215	ENST00000456545	PLA2G1B	P04054	148 aa	Known RBP	11.65	□□□□□ -0.54
PDLIM2-215	ENST00000456545	NDUFA5	Q16718	116 aa		11.65	□□□□□ -0.54
PDLIM2-215	ENST00000456545	KIAA1644	Q3SXP7	199 aa		11.65	□□□□□ -0.54
PDLIM2-215	ENST00000456545	C10orf91	Q5T1B1	145 aa		11.65	□□□□□ -0.54
PDLIM2-215	ENST00000456545	SDIM1	Q6ZPB5	146 aa		11.65	□□□□□ -0.54
PDLIM2-215	ENST00000456545	LINC00528	Q8N1L1	170 aa		11.65	□□□□□ -0.54
PDLIM2-215	ENST00000456545	OPRPN	Q99935	248 aa	Predicted RBP	11.65	□□□□□ -0.54
PDLIM2-215	ENST00000456545	MRPS36	P82909	103 aa	Known RBP	11.64	□□□□□ -0.55
PDLIM2-215	ENST00000456545	ORMDL2	Q53FV1	153 aa		11.64	□□□□□ -0.55
PDLIM2-215	ENST00000456545	NXT2	Q9NPJ8	142 aa	Known RBP	11.64	□□□□□ -0.55
PDLIM2-215	ENST00000456545	IFITM10	A6NMD0	228 aa		11.63	□□□□□ -0.55
PDLIM2-215	ENST00000456545	APOC3	P02656	99 aa		11.63	□□□□□ -0.55
PDLIM2-215	ENST00000456545	COX19	Q49B96	90 aa		11.63	□□□□□ -0.55
PDLIM2-215	ENST00000456545	GNB1L	Q9BYB4	327 aa		11.63	□□□□□ -0.55
PDLIM2-215	ENST00000456545	CYSLTR1	Q9Y271	337 aa		11.63	□□□□□ -0.55
PDLIM2-215	ENST00000456545		K7EMI3	77 aa		11.62	□□□□□ -0.55
PDLIM2-215	ENST00000456545	APOM	O95445	188 aa		11.62	□□□□□ -0.55
PDLIM2-215	ENST00000456545	G0S2	P27469	103 aa		11.62	□□□□□ -0.55
PDLIM2-215	ENST00000456545	C5orf38	Q86SI9	138 aa		11.62	□□□□□ -0.55
PDLIM2-215	ENST00000456545	LINC00526	Q96FQ7	95 aa		11.62	□□□□□ -0.55
PDLIM2-215	ENST00000456545	ABCA13	Q86UQ4	5058 aa		11.61	□□□□□ -0.55
PDLIM2-215	ENST00000456545	PRSS3P2	Q8NHM4	247 aa		11.61	□□□□□ -0.55
PDLIM2-215	ENST00000456545	PYGO1	Q9Y3Y4	419 aa		11.61	□□□□□ -0.55
PDLIM2-215	ENST00000456545	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.61	□□□□□ -0.55
PDLIM2-215	ENST00000456545	COX6A2	Q02221	97 aa		11.6	□□□□□ -0.55
PDLIM2-215	ENST00000456545	C2orf66	Q6UXQ4	117 aa		11.6	□□□□□ -0.55
PDLIM2-215	ENST00000456545		Q6ZN92	141 aa		11.6	□□□□□ -0.55
PDLIM2-215	ENST00000456545	TMEM141	Q96I45	108 aa		11.6	□□□□□ -0.55
PDLIM2-215	ENST00000456545	SNAPIN	O95295	136 aa		11.59	□□□□□ -0.55
PDLIM2-215	ENST00000456545	FABP9	Q0Z7S8	132 aa		11.59	□□□□□ -0.55
PDLIM2-215	ENST00000456545	TEX43	Q6ZNM6	134 aa		11.59	□□□□□ -0.55
PDLIM2-215	ENST00000456545	CARD19	Q96LW7	228 aa		11.59	□□□□□ -0.55

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