RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 UBE2E2Q96LR5 201 aa7.08□□□□□ -1.28
LINC01940-201ENST00000455228 IGHV3-11P01762 117 aa7.07□□□□□ -1.28
LINC01940-201ENST00000455228 HOXD3P31249 432 aaPredicted RBP7.07□□□□□ -1.28
LINC01940-201ENST00000455228 FBXL19-AS1Q494R0 122 aa7.07□□□□□ -1.28
LINC01940-201ENST00000455228 ASH1LQ9NR48 2969 aaKnown RBP7.07□□□□□ -1.28
LINC01940-201ENST00000455228 IGHV1-69DA0A0B4J2H0 117 aa7.07□□□□□ -1.28
LINC01940-201ENST00000455228 VCYO14598 125 aa7.07□□□□□ -1.28
LINC01940-201ENST00000455228 ATP5EP2Q5VTU8 51 aa7.07□□□□□ -1.28
LINC01940-201ENST00000455228 C5orf56Q8N8D9 126 aa7.07□□□□□ -1.28
LINC01940-201ENST00000455228 COL12A1Q99715 3063 aa7.06□□□□□ -1.28
LINC01940-201ENST00000455228 TRBV12-3P01733 135 aa7.06□□□□□ -1.28
LINC01940-201ENST00000455228 INAFM2P0DMQ5 153 aa7.06□□□□□ -1.28
LINC01940-201ENST00000455228 RNASE3P12724 160 aaKnown RBP7.06□□□□□ -1.28
LINC01940-201ENST00000455228 Q1RN00 199 aa7.06□□□□□ -1.28
LINC01940-201ENST00000455228 C11orf71Q6IPW1 123 aa7.06□□□□□ -1.28
LINC01940-201ENST00000455228 GPHB5Q86YW7 130 aa7.06□□□□□ -1.28
LINC01940-201ENST00000455228 TMEM141Q96I45 108 aa7.06□□□□□ -1.28
LINC01940-201ENST00000455228 MED14OSP0DP75 135 aa7.06□□□□□ -1.28
LINC01940-201ENST00000455228 LITAFQ99732 161 aa7.06□□□□□ -1.28
LINC01940-201ENST00000455228 RNF223E7ERA6 249 aa7.06□□□□□ -1.28
LINC01940-201ENST00000455228 MOB4Q9Y3A3 225 aa7.06□□□□□ -1.28
LINC01940-201ENST00000455228 TRAV13-2A0A0B4J235 113 aa7.05□□□□□ -1.28
LINC01940-201ENST00000455228 NDUFA4O00483 81 aa7.05□□□□□ -1.28
LINC01940-201ENST00000455228 TSHBP01222 138 aa7.05□□□□□ -1.28
LINC01940-201ENST00000455228 RELNP78509 3460 aa7.05□□□□□ -1.28
LINC01940-201ENST00000455228 TSPEAR-AS2P59090 65 aa7.05□□□□□ -1.28
LINC01940-201ENST00000455228 SUMO4Q6EEV6 95 aa7.05□□□□□ -1.28
LINC01940-201ENST00000455228 RBM12B-AS1Q9P1G2 102 aa7.05□□□□□ -1.28
LINC01940-201ENST00000455228 SVEP1Q4LDE5 3571 aa7.05□□□□□ -1.28
LINC01940-201ENST00000455228 IGHV3-64A0A075B6Q5 118 aa7.04□□□□□ -1.28
LINC01940-201ENST00000455228 IGHV4-39P01824 125 aa7.04□□□□□ -1.28
LINC01940-201ENST00000455228 KLK9Q2XQG4 91 aa7.04□□□□□ -1.28
LINC01940-201ENST00000455228 RHPN1-AS1Q9BWJ2 59 aa7.04□□□□□ -1.28
LINC01940-201ENST00000455228 KLK9Q9UKQ9 250 aa7.04□□□□□ -1.28
LINC01940-201ENST00000455228 TRAV12-3A0A0B4J271 114 aa7.04□□□□□ -1.28
LINC01940-201ENST00000455228 COX6CP09669 75 aa7.04□□□□□ -1.28
LINC01940-201ENST00000455228 SNRPD3P62318 126 aaKnown RBP7.04□□□□□ -1.28
LINC01940-201ENST00000455228 SS18Q15532 418 aa7.04□□□□□ -1.28
LINC01940-201ENST00000455228 C6orf223Q8N319 242 aa7.04□□□□□ -1.28
LINC01940-201ENST00000455228 TIMM17AQ99595 171 aa7.04□□□□□ -1.28
LINC01940-201ENST00000455228 LINC00474Q9P2X8 69 aa7.04□□□□□ -1.28
LINC01940-201ENST00000455228 BSNQ9UPA5 3926 aa7.04□□□□□ -1.28
LINC01940-201ENST00000455228 IGHV4OR15-8A0A075B7B6 117 aa7.03□□□□□ -1.28
LINC01940-201ENST00000455228 A0A087WW49 117 aa7.03□□□□□ -1.28
LINC01940-201ENST00000455228 Q1T7F1 81 aa7.03□□□□□ -1.28
LINC01940-201ENST00000455228 BPESC1Q9GZL8 116 aa7.03□□□□□ -1.28
LINC01940-201ENST00000455228 MUC4Q99102 2169 aa7.03□□□□□ -1.28
LINC01940-201ENST00000455228 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.03□□□□□ -1.28
LINC01940-201ENST00000455228 POLR2KP53803 58 aaKnown RBP7.03□□□□□ -1.28
LINC01940-201ENST00000455228 LY6EQ16553 131 aa7.03□□□□□ -1.28
LINC01940-201ENST00000455228 MRPL55Q7Z7F7 128 aaKnown RBP7.03□□□□□ -1.28
LINC01940-201ENST00000455228 SOCS3O14543 225 aa7.03□□□□□ -1.28
LINC01940-201ENST00000455228 BRD3OSQ6XYD6 125 aa7.03□□□□□ -1.28
LINC01940-201ENST00000455228 TRAV7A0A075B6U4 112 aa7.02□□□□□ -1.29
LINC01940-201ENST00000455228 IGKV3-20P01619 116 aa7.02□□□□□ -1.29
LINC01940-201ENST00000455228 ZNF876PQ49A33 203 aa7.02□□□□□ -1.29
LINC01940-201ENST00000455228 KTN1-AS1Q86SY8 53 aa7.02□□□□□ -1.29
LINC01940-201ENST00000455228 OPRPNQ99935 248 aaPredicted RBP7.02□□□□□ -1.29
LINC01940-201ENST00000455228 CREBBPQ92793 2442 aa7.02□□□□□ -1.29
LINC01940-201ENST00000455228 C11orf45Q8TAV5 145 aa7.02□□□□□ -1.29
LINC01940-201ENST00000455228 KIF25-AS1Q9Y6Z4 181 aa7.02□□□□□ -1.29
LINC01940-201ENST00000455228 LINC00315P59091 139 aa7.02□□□□□ -1.29
LINC01940-201ENST00000455228 MUSTN1Q8IVN3 82 aa7.02□□□□□ -1.29
LINC01940-201ENST00000455228 HRNRQ86YZ3 2850 aaPredicted RBP7.01□□□□□ -1.29
LINC01940-201ENST00000455228 RBMY1BA6NDE4 496 aaKnown RBP7.01□□□□□ -1.29
LINC01940-201ENST00000455228 RBMY1EA6NEQ0 496 aaKnown RBP7.01□□□□□ -1.29
LINC01940-201ENST00000455228 TIMM17BO60830 172 aa7.01□□□□□ -1.29
LINC01940-201ENST00000455228 PRSS2P07478 247 aa7.01□□□□□ -1.29
LINC01940-201ENST00000455228 RBMY1DP0C7P1 496 aaKnown RBP7.01□□□□□ -1.29
LINC01940-201ENST00000455228 RBMY1A1P0DJD3 496 aaKnown RBP7.01□□□□□ -1.29
LINC01940-201ENST00000455228 RBMY1CP0DJD4 496 aa7.01□□□□□ -1.29
LINC01940-201ENST00000455228 RBMY1FQ15415 496 aaKnown RBP7.01□□□□□ -1.29
LINC01940-201ENST00000455228 USMG5Q96IX5 58 aa7.01□□□□□ -1.29
LINC01940-201ENST00000455228 I3L3M4 83 aa7.01□□□□□ -1.29
LINC01940-201ENST00000455228 LEPROTO15243 131 aa7.01□□□□□ -1.29
LINC01940-201ENST00000455228 NXPH4O95158 308 aa7.01□□□□□ -1.29
LINC01940-201ENST00000455228 FAM208BQ5VWN6 2430 aa7□□□□□ -1.29
LINC01940-201ENST00000455228 TRBV27A0A0K0K1C4 114 aa7□□□□□ -1.29
LINC01940-201ENST00000455228 SORL1Q92673 2214 aa7□□□□□ -1.29
LINC01940-201ENST00000455228 H3BS24 57 aa7□□□□□ -1.29
LINC01940-201ENST00000455228 LMO4P61968 165 aa7□□□□□ -1.29
LINC01940-201ENST00000455228 PHF5AQ7RTV0 110 aaKnown RBP6.99□□□□□ -1.29
LINC01940-201ENST00000455228 A0A1W2PPR1 153 aa6.99□□□□□ -1.29
LINC01940-201ENST00000455228 KLLNB2CW77 178 aa6.99□□□□□ -1.29
LINC01940-201ENST00000455228 A0A0J9YXV3 536 aa6.98□□□□□ -1.29
LINC01940-201ENST00000455228 ERC2-IT1O76042 136 aa6.98□□□□□ -1.29
LINC01940-201ENST00000455228 ADARB2-AS1A8MUL3 147 aa6.98□□□□□ -1.29
LINC01940-201ENST00000455228 COX7A2LO14548 114 aa6.98□□□□□ -1.29
LINC01940-201ENST00000455228 IGHV1-69P01742 117 aa6.98□□□□□ -1.29
LINC01940-201ENST00000455228 TMEM61Q8N0U2 210 aa6.98□□□□□ -1.29
LINC01940-201ENST00000455228 TRBV6-5A0A0K0K1A5 114 aa6.97□□□□□ -1.29
LINC01940-201ENST00000455228 H3BUX3 64 aa6.97□□□□□ -1.29
LINC01940-201ENST00000455228 M0QY20 66 aa6.97□□□□□ -1.29
LINC01940-201ENST00000455228 HTN1P15515 57 aa6.97□□□□□ -1.29
LINC01940-201ENST00000455228 C19orf54Q5BKX5 351 aa6.97□□□□□ -1.29
LINC01940-201ENST00000455228 LINC00588Q9Y4M8 146 aa6.97□□□□□ -1.29
LINC01940-201ENST00000455228 HIVEP3Q5T1R4 2406 aa6.97□□□□□ -1.29
LINC01940-201ENST00000455228 A0A0J9YXY3 114 aa6.97□□□□□ -1.29
LINC01940-201ENST00000455228 APOC4P55056 127 aa6.97□□□□□ -1.29
LINC01940-201ENST00000455228 BLCAPP62952 87 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms