RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 SMIM7Q9BQ49 75 aa17.05■□□□□ 0.32
USP42-204ENST00000451154 LINC01551Q86U37 167 aa17.04■□□□□ 0.32
USP42-204ENST00000451154 TSKUQ8WUA8 353 aa17.04■□□□□ 0.32
USP42-204ENST00000451154 EIF5A2Q9GZV4 153 aaKnown RBP17.04■□□□□ 0.32
USP42-204ENST00000451154 TMEM191AQ9H0A3 160 aa17.04■□□□□ 0.32
USP42-204ENST00000451154 A0A096LNI7 61 aa17.03■□□□□ 0.32
USP42-204ENST00000451154 RAB4AP20338 218 aa17.03■□□□□ 0.32
USP42-204ENST00000451154 POLR2KP53803 58 aaKnown RBP17.03■□□□□ 0.32
USP42-204ENST00000451154 MRAP2Q96G30 205 aa17.03■□□□□ 0.32
USP42-204ENST00000451154 TNXBP22105 4242 aa17.02■□□□□ 0.32
USP42-204ENST00000451154 hCG_2014768A0A024R1R8 64 aa17.02■□□□□ 0.32
USP42-204ENST00000451154 CDC42SE2Q9NRR3 84 aa17.02■□□□□ 0.32
USP42-204ENST00000451154 IGHV1-58A0A0C4DH39 117 aa17.01■□□□□ 0.31
USP42-204ENST00000451154 SS18Q15532 418 aa17.01■□□□□ 0.31
USP42-204ENST00000451154 AMN1Q8IY45 258 aa17.01■□□□□ 0.31
USP42-204ENST00000451154 TRBV27A0A0K0K1C4 114 aa17■□□□□ 0.31
USP42-204ENST00000451154 OSTCQ9NRP0 149 aa17■□□□□ 0.31
USP42-204ENST00000451154 ZNF727A8MUV8 499 aa16.99■□□□□ 0.31
USP42-204ENST00000451154 MRPL52Q86TS9 123 aaKnown RBP16.99■□□□□ 0.31
USP42-204ENST00000451154 ZNF664Q8N3J9 261 aa16.99■□□□□ 0.31
USP42-204ENST00000451154 SMKR1H3BMG3 65 aa16.98■□□□□ 0.31
USP42-204ENST00000451154 PRR3P79522 188 aaKnown RBP16.98■□□□□ 0.31
USP42-204ENST00000451154 CD164L2Q6UWJ8 174 aa16.98■□□□□ 0.31
USP42-204ENST00000451154 FAM210AQ96ND0 272 aa16.98■□□□□ 0.31
USP42-204ENST00000451154 CARD19Q96LW7 228 aa16.97■□□□□ 0.31
USP42-204ENST00000451154 C7orf77A4D0Y5 90 aa16.96■□□□□ 0.31
USP42-204ENST00000451154 SRP19P09132 144 aaKnown RBP16.96■□□□□ 0.31
USP42-204ENST00000451154 VCYO14598 125 aa16.95■□□□□ 0.3
USP42-204ENST00000451154 LINC00474Q9P2X8 69 aa16.95■□□□□ 0.3
USP42-204ENST00000451154 ZNF561-AS1K7EIQ3 104 aa16.94■□□□□ 0.3
USP42-204ENST00000451154 SYCNQ0VAF6 134 aa16.94■□□□□ 0.3
USP42-204ENST00000451154 RIGQ13278 110 aa16.94■□□□□ 0.3
USP42-204ENST00000451154 NUP35Q8NFH5 326 aa16.94■□□□□ 0.3
USP42-204ENST00000451154 V9GYV3 84 aa16.94■□□□□ 0.3
USP42-204ENST00000451154 FCER1GP30273 86 aa16.93■□□□□ 0.3
USP42-204ENST00000451154 NRACQ8N912 160 aa16.91■□□□□ 0.3
USP42-204ENST00000451154 LINC01600Q96MT4 127 aa16.91■□□□□ 0.3
USP42-204ENST00000451154 PKIGQ9Y2B9 76 aa16.91■□□□□ 0.3
USP42-204ENST00000451154 RNASE13Q5GAN3 156 aaKnown RBP16.9■□□□□ 0.3
USP42-204ENST00000451154 C1orf196B1AJZ1 125 aa16.89■□□□□ 0.29
USP42-204ENST00000451154 CAMPP49913 170 aa16.89■□□□□ 0.29
USP42-204ENST00000451154 SUMO2P61956 95 aaKnown RBP16.89■□□□□ 0.29
USP42-204ENST00000451154 IGLV4-69A0A075B6H9 119 aa16.88■□□□□ 0.29
USP42-204ENST00000451154 PPP1R17O96001 155 aa16.88■□□□□ 0.29
USP42-204ENST00000451154 MALP21145 153 aa16.88■□□□□ 0.29
USP42-204ENST00000451154 TMEM241Q24JQ0 296 aa16.88■□□□□ 0.29
USP42-204ENST00000451154 ISOC2Q96AB3 205 aa16.88■□□□□ 0.29
USP42-204ENST00000451154 UBE2D4Q9Y2X8 147 aa16.88■□□□□ 0.29
USP42-204ENST00000451154 COX7A2LO14548 114 aa16.87■□□□□ 0.29
USP42-204ENST00000451154 KIR2DL4Q99706 377 aa16.87■□□□□ 0.29
USP42-204ENST00000451154 CSDC2Q9Y534 153 aaKnown RBP16.87■□□□□ 0.29
USP42-204ENST00000451154 TRAV13-1A0A0B4J241 112 aa16.86■□□□□ 0.29
USP42-204ENST00000451154 GAGE2BQ13066 116 aa16.86■□□□□ 0.29
USP42-204ENST00000451154 ODF1Q14990 250 aa16.86■□□□□ 0.29
USP42-204ENST00000451154 NAT8BQ9UHF3 227 aa16.86■□□□□ 0.29
USP42-204ENST00000451154 PTTG1IPP53801 180 aa16.85■□□□□ 0.29
USP42-204ENST00000451154 RPL23P62829 140 aaKnown RBP16.85■□□□□ 0.29
USP42-204ENST00000451154 MRPL51Q4U2R6 128 aaKnown RBP16.85■□□□□ 0.29
USP42-204ENST00000451154 LRP2P98164 4655 aa16.85■□□□□ 0.29
USP42-204ENST00000451154 FAM104BQ5XKR9 115 aa16.84■□□□□ 0.29
USP42-204ENST00000451154 SPINK6Q6UWN8 80 aa16.84■□□□□ 0.29
USP42-204ENST00000451154 LOC107984640A0A0U1RRK4 108 aa16.83■□□□□ 0.28
USP42-204ENST00000451154 SMAGPQ0VAQ4 97 aa16.83■□□□□ 0.28
USP42-204ENST00000451154 C5orf38Q86SI9 138 aa16.83■□□□□ 0.28
USP42-204ENST00000451154 C9JQL5 133 aa16.82■□□□□ 0.28
USP42-204ENST00000451154 PPP1R2P9O14990 202 aa16.82■□□□□ 0.28
USP42-204ENST00000451154 ADIRFQ15847 76 aa16.82■□□□□ 0.28
USP42-204ENST00000451154 FAM74A3Q4VXF1 159 aa16.82■□□□□ 0.28
USP42-204ENST00000451154 Q6ZRP5 223 aa16.82■□□□□ 0.28
USP42-204ENST00000451154 SRSF9Q13242 221 aaKnown RBP eCLIP16.81■□□□□ 0.28
USP42-204ENST00000451154 Q6ZUT4 128 aa16.81■□□□□ 0.28
USP42-204ENST00000451154 CAMK2N2Q96S95 79 aa16.81■□□□□ 0.28
USP42-204ENST00000451154 A0A0J9YXV3 536 aa16.8■□□□□ 0.28
USP42-204ENST00000451154 A0A1W2PNN7 141 aa16.8■□□□□ 0.28
USP42-204ENST00000451154 SMIM27A0A1W2PRY6 76 aa16.79■□□□□ 0.28
USP42-204ENST00000451154 TIMM21Q9BVV7 248 aa16.79■□□□□ 0.28
USP42-204ENST00000451154 CKS2P33552 79 aa16.78■□□□□ 0.28
USP42-204ENST00000451154 KRTAP10-8P60410 259 aa16.78■□□□□ 0.28
USP42-204ENST00000451154 REG3GQ6UW15 175 aa16.78■□□□□ 0.28
USP42-204ENST00000451154 TMEM18Q96B42 140 aa16.78■□□□□ 0.28
USP42-204ENST00000451154 C20orf78Q9BR46 151 aa16.78■□□□□ 0.28
USP42-204ENST00000451154 NAT8Q9UHE5 227 aa16.78■□□□□ 0.28
USP42-204ENST00000451154 LINC00862A6NCI5 91 aa16.77■□□□□ 0.28
USP42-204ENST00000451154 APOMO95445 188 aa16.77■□□□□ 0.28
USP42-204ENST00000451154 RPL39P62891 51 aaKnown RBP16.77■□□□□ 0.28
USP42-204ENST00000451154 C2orf48Q96LS8 159 aa16.77■□□□□ 0.28
USP42-204ENST00000451154 TRBV24-1A0A075B6N3 115 aa16.76■□□□□ 0.27
USP42-204ENST00000451154 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.76■□□□□ 0.27
USP42-204ENST00000451154 SRSF3P84103 164 aaKnown RBP16.76■□□□□ 0.27
USP42-204ENST00000451154 OPRPNQ99935 248 aaPredicted RBP16.76■□□□□ 0.27
USP42-204ENST00000451154 TNFRSF6BO95407 300 aa16.74■□□□□ 0.27
USP42-204ENST00000451154 FAM104AQ969W3 186 aa16.74■□□□□ 0.27
USP42-204ENST00000451154 A0A1B0GW15 77 aa16.73■□□□□ 0.27
USP42-204ENST00000451154 RPL32P62910 135 aaKnown RBP16.73■□□□□ 0.27
USP42-204ENST00000451154 RPL18AQ02543 176 aaKnown RBP16.73■□□□□ 0.27
USP42-204ENST00000451154 SPAG11BQ08648 103 aa16.73■□□□□ 0.27
USP42-204ENST00000451154 C9orf116Q5BN46 136 aaPredicted RBP16.73■□□□□ 0.27
USP42-204ENST00000451154 RNF213Q63HN8 5207 aa16.73■□□□□ 0.27
USP42-204ENST00000451154 MRPL54Q6P161 138 aaKnown RBP16.72■□□□□ 0.27
USP42-204ENST00000451154 A0A1B0GVG6 124 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms