RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 SUMO2P61956 95 aaKnown RBP10.02□□□□□ -0.81
LIMS1-210ENST00000449684 CNBPP62633 177 aaKnown RBP10.02□□□□□ -0.81
LIMS1-210ENST00000449684 MRPL51Q4U2R6 128 aaKnown RBP10.02□□□□□ -0.81
LIMS1-210ENST00000449684 LINC00862A6NCI5 91 aa10.01□□□□□ -0.81
LIMS1-210ENST00000449684 F8W036 122 aa10.01□□□□□ -0.81
LIMS1-210ENST00000449684 CKS2P33552 79 aa10.01□□□□□ -0.81
LIMS1-210ENST00000449684 SS18Q15532 418 aa10.01□□□□□ -0.81
LIMS1-210ENST00000449684 MRPL54Q6P161 138 aaKnown RBP10.01□□□□□ -0.81
LIMS1-210ENST00000449684 XCL1P47992 114 aa10□□□□□ -0.81
LIMS1-210ENST00000449684 HBBP68871 147 aa10□□□□□ -0.81
LIMS1-210ENST00000449684 HIGD2BQ4VC39 106 aa10□□□□□ -0.81
LIMS1-210ENST00000449684 FLG2Q5D862 2391 aaPredicted RBP10□□□□□ -0.81
LIMS1-210ENST00000449684 LINC00959A0A1B0GUT2 108 aa9.99□□□□□ -0.81
LIMS1-210ENST00000449684 CCL25O15444 150 aa9.99□□□□□ -0.81
LIMS1-210ENST00000449684 SDIM1Q6ZPB5 146 aa9.99□□□□□ -0.81
LIMS1-210ENST00000449684 MRPL52Q86TS9 123 aaKnown RBP9.99□□□□□ -0.81
LIMS1-210ENST00000449684 ZNF664Q8N3J9 261 aa9.99□□□□□ -0.81
LIMS1-210ENST00000449684 NRACQ8N912 160 aa9.99□□□□□ -0.81
LIMS1-210ENST00000449684 TMEM18Q96B42 140 aa9.99□□□□□ -0.81
LIMS1-210ENST00000449684 C15orf56Q8N910 161 aa9.98□□□□□ -0.81
LIMS1-210ENST00000449684 C20orf78Q9BR46 151 aa9.98□□□□□ -0.81
LIMS1-210ENST00000449684 CDC42SE2Q9NRR3 84 aa9.98□□□□□ -0.81
LIMS1-210ENST00000449684 DMBT1Q9UGM3 2413 aaPredicted RBP9.97□□□□□ -0.81
LIMS1-210ENST00000449684 TCAPO15273 167 aa9.97□□□□□ -0.81
LIMS1-210ENST00000449684 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.97□□□□□ -0.81
LIMS1-210ENST00000449684 J3QL48 77 aa9.96□□□□□ -0.82
LIMS1-210ENST00000449684 TNFRSF6BO95407 300 aa9.96□□□□□ -0.82
LIMS1-210ENST00000449684 SLPIP03973 132 aa9.96□□□□□ -0.82
LIMS1-210ENST00000449684 PNRC1Q12796 327 aaPredicted RBP9.96□□□□□ -0.82
LIMS1-210ENST00000449684 FOXI1Q12951 378 aa9.96□□□□□ -0.82
LIMS1-210ENST00000449684 IGHV1-58A0A0C4DH39 117 aa9.95□□□□□ -0.82
LIMS1-210ENST00000449684 D6R8Y8 96 aa9.95□□□□□ -0.82
LIMS1-210ENST00000449684 RPL37AP61513 92 aaKnown RBP9.95□□□□□ -0.82
LIMS1-210ENST00000449684 TRBV24-1A0A075B6N3 115 aa9.94□□□□□ -0.82
LIMS1-210ENST00000449684 C1orf196B1AJZ1 125 aa9.94□□□□□ -0.82
LIMS1-210ENST00000449684 PPBPP02775 128 aa9.94□□□□□ -0.82
LIMS1-210ENST00000449684 MT-ND4LP03901 98 aa9.94□□□□□ -0.82
LIMS1-210ENST00000449684 MALP21145 153 aa9.94□□□□□ -0.82
LIMS1-210ENST00000449684 CD164L2Q6UWJ8 174 aa9.94□□□□□ -0.82
LIMS1-210ENST00000449684 ATP5L2Q7Z4Y8 100 aa9.94□□□□□ -0.82
LIMS1-210ENST00000449684 UBE2D4Q9Y2X8 147 aa9.94□□□□□ -0.82
LIMS1-210ENST00000449684 CSDC2Q9Y534 153 aaKnown RBP9.94□□□□□ -0.82
LIMS1-210ENST00000449684 GVQW2A0A096LPI5 108 aaPredicted RBP9.93□□□□□ -0.82
LIMS1-210ENST00000449684 A0A1B0GXF2 115 aa9.93□□□□□ -0.82
LIMS1-210ENST00000449684 PANO1I0J062 215 aa9.93□□□□□ -0.82
LIMS1-210ENST00000449684 ZNF561-AS1K7EIQ3 104 aa9.93□□□□□ -0.82
LIMS1-210ENST00000449684 RPL32P62910 135 aaKnown RBP9.93□□□□□ -0.82
LIMS1-210ENST00000449684 RNASE13Q5GAN3 156 aaKnown RBP9.93□□□□□ -0.82
LIMS1-210ENST00000449684 ANAPC16Q96DE5 110 aa9.93□□□□□ -0.82
LIMS1-210ENST00000449684 SMIM2Q9BVW6 85 aa9.93□□□□□ -0.82
LIMS1-210ENST00000449684 MYCBP2O75592 4640 aa9.93□□□□□ -0.82
LIMS1-210ENST00000449684 TRAV13-1A0A0B4J241 112 aa9.92□□□□□ -0.82
LIMS1-210ENST00000449684 CHTF8P0CG12 524 aa9.92□□□□□ -0.82
LIMS1-210ENST00000449684 RAB5AP20339 215 aa9.92□□□□□ -0.82
LIMS1-210ENST00000449684 COX6A2Q02221 97 aa9.92□□□□□ -0.82
LIMS1-210ENST00000449684 TMEM136Q6ZRR5 245 aa9.92□□□□□ -0.82
LIMS1-210ENST00000449684 ORMDL3Q8N138 153 aa9.92□□□□□ -0.82
LIMS1-210ENST00000449684 PHOX2AO14813 284 aa9.91□□□□□ -0.82
LIMS1-210ENST00000449684 NPYP01303 97 aa9.91□□□□□ -0.82
LIMS1-210ENST00000449684 PRELID3AQ96N28 172 aa9.91□□□□□ -0.82
LIMS1-210ENST00000449684 TIMM21Q9BVV7 248 aa9.91□□□□□ -0.82
LIMS1-210ENST00000449684 PKIGQ9Y2B9 76 aa9.91□□□□□ -0.82
LIMS1-210ENST00000449684 A0A087WYN8 130 aa9.9□□□□□ -0.82
LIMS1-210ENST00000449684 IGKV2-24A0A0C4DH68 120 aa9.9□□□□□ -0.82
LIMS1-210ENST00000449684 COX7A2LO14548 114 aa9.9□□□□□ -0.82
LIMS1-210ENST00000449684 CLLU1Q5K131 121 aa9.9□□□□□ -0.82
LIMS1-210ENST00000449684 Q6ZUT4 128 aa9.9□□□□□ -0.82
LIMS1-210ENST00000449684 LINC00526Q96FQ7 95 aa9.9□□□□□ -0.82
LIMS1-210ENST00000449684 HERC1Q15751 4861 aa9.89□□□□□ -0.83
LIMS1-210ENST00000449684 RPL39P62891 51 aaKnown RBP9.89□□□□□ -0.83
LIMS1-210ENST00000449684 CIRBPQ14011 172 aaKnown RBP9.89□□□□□ -0.83
LIMS1-210ENST00000449684 MAJINQ3KP22 176 aa9.89□□□□□ -0.83
LIMS1-210ENST00000449684 PRSS3P2Q8NHM4 247 aa9.89□□□□□ -0.83
LIMS1-210ENST00000449684 SPACA4Q8TDM5 124 aa9.89□□□□□ -0.83
LIMS1-210ENST00000449684 CARD19Q96LW7 228 aa9.89□□□□□ -0.83
LIMS1-210ENST00000449684 APOMO95445 188 aa9.88□□□□□ -0.83
LIMS1-210ENST00000449684 SYCNQ0VAF6 134 aa9.87□□□□□ -0.83
LIMS1-210ENST00000449684 C7orf33Q8WU49 177 aa9.87□□□□□ -0.83
LIMS1-210ENST00000449684 SPANXA1Q9NS26 97 aa9.87□□□□□ -0.83
LIMS1-210ENST00000449684 LINC00474Q9P2X8 69 aa9.87□□□□□ -0.83
LIMS1-210ENST00000449684 LOC389332A0A1B0GUA5 103 aa9.86□□□□□ -0.83
LIMS1-210ENST00000449684 KRTAP29-1A8MX34 341 aaPredicted RBP9.86□□□□□ -0.83
LIMS1-210ENST00000449684 KRTAP10-4P60372 401 aaPredicted RBP9.86□□□□□ -0.83
LIMS1-210ENST00000449684 C5orf38Q86SI9 138 aa9.86□□□□□ -0.83
LIMS1-210ENST00000449684 STPG4Q8N801 248 aa9.86□□□□□ -0.83
LIMS1-210ENST00000449684 MAP1LC3AQ9H492 121 aa9.86□□□□□ -0.83
LIMS1-210ENST00000449684 LAMTOR2Q9Y2Q5 125 aa9.86□□□□□ -0.83
LIMS1-210ENST00000449684 IFI27P40305 119 aaPredicted RBP9.85□□□□□ -0.83
LIMS1-210ENST00000449684 PLAC8Q9NZF1 115 aa9.85□□□□□ -0.83
LIMS1-210ENST00000449684 IGLV4-69A0A075B6H9 119 aa9.84□□□□□ -0.83
LIMS1-210ENST00000449684 IFITM10A6NMD0 228 aa9.84□□□□□ -0.83
LIMS1-210ENST00000449684 UQCC3Q6UW78 93 aa9.84□□□□□ -0.83
LIMS1-210ENST00000449684 CAMK2N2Q96S95 79 aa9.84□□□□□ -0.83
LIMS1-210ENST00000449684 A0A096LNI7 61 aa9.83□□□□□ -0.84
LIMS1-210ENST00000449684 MRPS36P82909 103 aaKnown RBP9.83□□□□□ -0.84
LIMS1-210ENST00000449684 OPRPNQ99935 248 aaPredicted RBP9.83□□□□□ -0.84
LIMS1-210ENST00000449684 CTDSP1Q9GZU7 261 aa9.83□□□□□ -0.84
LIMS1-210ENST00000449684 OXTP01178 125 aa9.82□□□□□ -0.84
LIMS1-210ENST00000449684 LOC107984640A0A0U1RRK4 108 aa9.81□□□□□ -0.84
LIMS1-210ENST00000449684 TMEM218A2RU14 115 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms