RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 Q6ZPA2 131 aa4.15□□□□□ -1.74
CDC42BPA-209ENST00000448940 YPEL4Q96NS1 127 aa4.15□□□□□ -1.74
CDC42BPA-209ENST00000448940 hADV29S1A0JD25 119 aa4.15□□□□□ -1.74
CDC42BPA-209ENST00000448940 H3BQ15 152 aa4.15□□□□□ -1.74
CDC42BPA-209ENST00000448940 MPV17L2Q567V2 206 aa4.15□□□□□ -1.74
CDC42BPA-209ENST00000448940 Q8N1Y9 231 aa4.15□□□□□ -1.74
CDC42BPA-209ENST00000448940 CYSRT1A8MQ03 144 aa4.15□□□□□ -1.75
CDC42BPA-209ENST00000448940 GNRH2O43555 120 aa4.15□□□□□ -1.75
CDC42BPA-209ENST00000448940 HSD52Q0P140 79 aa4.15□□□□□ -1.75
CDC42BPA-209ENST00000448940 LGALS9BQ3B8N2 356 aa4.15□□□□□ -1.75
CDC42BPA-209ENST00000448940 FAM19A5Q7Z5A7 132 aaPredicted RBP4.15□□□□□ -1.75
CDC42BPA-209ENST00000448940 DEFB1P60022 68 aa4.15□□□□□ -1.75
CDC42BPA-209ENST00000448940 LINC01556Q5JQF7 62 aa4.15□□□□□ -1.75
CDC42BPA-209ENST00000448940 I3L3M4 83 aa4.14□□□□□ -1.75
CDC42BPA-209ENST00000448940 KIR3DS1Q14943 382 aa4.14□□□□□ -1.75
CDC42BPA-209ENST00000448940 C1orf137Q5JT78 98 aa4.14□□□□□ -1.75
CDC42BPA-209ENST00000448940 PCP2Q8IVA1 136 aa4.14□□□□□ -1.75
CDC42BPA-209ENST00000448940 C14orf144Q96I85 54 aa4.14□□□□□ -1.75
CDC42BPA-209ENST00000448940 H3BMG7 143 aa4.14□□□□□ -1.75
CDC42BPA-209ENST00000448940 ASPHD1Q5U4P2 390 aa4.14□□□□□ -1.75
CDC42BPA-209ENST00000448940 LINC00269Q8N2A0 174 aa4.14□□□□□ -1.75
CDC42BPA-209ENST00000448940 FLNCQ14315 2725 aa4.14□□□□□ -1.75
CDC42BPA-209ENST00000448940 TRBV7-3A0A075B6L6 115 aa4.14□□□□□ -1.75
CDC42BPA-209ENST00000448940 TRAV12-1A0A0B4J245 112 aa4.14□□□□□ -1.75
CDC42BPA-209ENST00000448940 FOXA3P55318 350 aaPredicted RBP4.14□□□□□ -1.75
CDC42BPA-209ENST00000448940 PMAIP1Q13794 54 aa4.14□□□□□ -1.75
CDC42BPA-209ENST00000448940 C17orf77Q96MU5 243 aa4.14□□□□□ -1.75
CDC42BPA-209ENST00000448940 SPAG11BQ08648 103 aa4.14□□□□□ -1.75
CDC42BPA-209ENST00000448940 ODF3Q96PU9 254 aa4.14□□□□□ -1.75
CDC42BPA-209ENST00000448940 SDHAF1A6NFY7 115 aa4.14□□□□□ -1.75
CDC42BPA-209ENST00000448940 CRYBA4P53673 196 aa4.14□□□□□ -1.75
CDC42BPA-209ENST00000448940 FAM19A1Q7Z5A9 133 aa4.13□□□□□ -1.75
CDC42BPA-209ENST00000448940 TRBV10-1A0A0K0K1A3 114 aa4.13□□□□□ -1.75
CDC42BPA-209ENST00000448940 CIRBP-AS1Q8TBR5 109 aa4.13□□□□□ -1.75
CDC42BPA-209ENST00000448940 H0YIZ8 118 aa4.13□□□□□ -1.75
CDC42BPA-209ENST00000448940 RNASE7Q9H1E1 156 aaKnown RBP4.13□□□□□ -1.75
CDC42BPA-209ENST00000448940 A0A087X0K7 114 aa4.13□□□□□ -1.75
CDC42BPA-209ENST00000448940 IGKV1D-37A0A075B6S9 117 aa4.12□□□□□ -1.75
CDC42BPA-209ENST00000448940 M0R2T5 61 aa4.12□□□□□ -1.75
CDC42BPA-209ENST00000448940 CBLN2Q8IUK8 224 aa4.12□□□□□ -1.75
CDC42BPA-209ENST00000448940 PLNP26678 52 aa4.12□□□□□ -1.75
CDC42BPA-209ENST00000448940 LGALS9CQ6DKI2 356 aa4.12□□□□□ -1.75
CDC42BPA-209ENST00000448940 C3orf22Q8N5N4 141 aa4.12□□□□□ -1.75
CDC42BPA-209ENST00000448940 STPG4Q8N801 248 aa4.12□□□□□ -1.75
CDC42BPA-209ENST00000448940 PTH2Q96A98 100 aa4.12□□□□□ -1.75
CDC42BPA-209ENST00000448940 PRSS46E5RG02 174 aa4.12□□□□□ -1.75
CDC42BPA-209ENST00000448940 MIAQ16674 131 aa4.12□□□□□ -1.75
CDC42BPA-209ENST00000448940 ZNF706Q9Y5V0 76 aaPredicted RBP4.12□□□□□ -1.75
CDC42BPA-209ENST00000448940 NBDYA0A0U1RRE5 68 aa4.12□□□□□ -1.75
CDC42BPA-209ENST00000448940 CASC2Q6XLA1 102 aa4.12□□□□□ -1.75
CDC42BPA-209ENST00000448940 SMIM26A0A096LP01 95 aa4.12□□□□□ -1.75
CDC42BPA-209ENST00000448940 A0A1B0GX51 115 aa4.12□□□□□ -1.75
CDC42BPA-209ENST00000448940 ZFAND3Q9H8U3 227 aa4.12□□□□□ -1.75
CDC42BPA-209ENST00000448940 REG3AQ06141 175 aa4.12□□□□□ -1.75
CDC42BPA-209ENST00000448940 TMEM254Q8TBM7 123 aa4.12□□□□□ -1.75
CDC42BPA-209ENST00000448940 IFITM2Q01629 132 aa4.11□□□□□ -1.75
CDC42BPA-209ENST00000448940 XIRP2A4UGR9 3374 aa4.11□□□□□ -1.75
CDC42BPA-209ENST00000448940 RPL28P46779 137 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-209ENST00000448940 FXYD5Q96DB9 178 aa4.11□□□□□ -1.75
CDC42BPA-209ENST00000448940 DKK2Q9UBU2 259 aa4.11□□□□□ -1.75
CDC42BPA-209ENST00000448940 FGF6P10767 208 aa4.11□□□□□ -1.75
CDC42BPA-209ENST00000448940 COA6Q5JTJ3 125 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-209ENST00000448940 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-209ENST00000448940 IGKV2-29A2NJV5 120 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-209ENST00000448940 PRAC2D3DTV9 90 aa4.11□□□□□ -1.75
CDC42BPA-209ENST00000448940 LAGE3Q14657 143 aa4.1□□□□□ -1.75
CDC42BPA-209ENST00000448940 RNASE13Q5GAN3 156 aaKnown RBP4.1□□□□□ -1.75
CDC42BPA-209ENST00000448940 SPINK6Q6UWN8 80 aa4.1□□□□□ -1.75
CDC42BPA-209ENST00000448940 HRCT1Q6UXD1 115 aa4.1□□□□□ -1.75
CDC42BPA-209ENST00000448940 LINC01551Q86U37 167 aa4.1□□□□□ -1.75
CDC42BPA-209ENST00000448940 AKAP13Q12802 2813 aa4.1□□□□□ -1.75
CDC42BPA-209ENST00000448940 BRCA2P51587 3418 aa4.1□□□□□ -1.75
CDC42BPA-209ENST00000448940 TINCRA0A1B0GVN0 87 aa4.1□□□□□ -1.75
CDC42BPA-209ENST00000448940 LELP1Q5T871 98 aa4.1□□□□□ -1.75
CDC42BPA-209ENST00000448940 LOC107984640A0A0U1RRK4 108 aa4.1□□□□□ -1.75
CDC42BPA-209ENST00000448940 C9JAW5 83 aa4.1□□□□□ -1.75
CDC42BPA-209ENST00000448940 FAM19A2Q8N3H0 131 aa4.1□□□□□ -1.75
CDC42BPA-209ENST00000448940 OCC1Q8TAD7 63 aa4.1□□□□□ -1.75
CDC42BPA-209ENST00000448940 ITPR2Q14571 2701 aa4.1□□□□□ -1.75
CDC42BPA-209ENST00000448940 MGAQ8IWI9 3026 aa4.1□□□□□ -1.75
CDC42BPA-209ENST00000448940 PLAC8L1A1L4L8 177 aa4.1□□□□□ -1.75
CDC42BPA-209ENST00000448940 RTL8CO15255 209 aa4.1□□□□□ -1.75
CDC42BPA-209ENST00000448940 SERP1Q9Y6X1 66 aa4.1□□□□□ -1.75
CDC42BPA-209ENST00000448940 IGHV1-58A0A0C4DH39 117 aa4.1□□□□□ -1.75
CDC42BPA-209ENST00000448940 H3BT86 120 aa4.1□□□□□ -1.75
CDC42BPA-209ENST00000448940 LEPROTO15243 131 aa4.1□□□□□ -1.75
CDC42BPA-209ENST00000448940 NAA38Q9BRA0 125 aaKnown RBP4.1□□□□□ -1.75
CDC42BPA-209ENST00000448940 MORN5Q5VZ52 161 aa4.09□□□□□ -1.75
CDC42BPA-209ENST00000448940 LINC00476Q8WZB0 136 aa4.09□□□□□ -1.75
CDC42BPA-209ENST00000448940 C9JQL5 133 aa4.09□□□□□ -1.75
CDC42BPA-209ENST00000448940 F8W1H4 67 aa4.09□□□□□ -1.75
CDC42BPA-209ENST00000448940 GATA1P15976 413 aaPredicted RBP4.09□□□□□ -1.75
CDC42BPA-209ENST00000448940 SYCNQ0VAF6 134 aa4.09□□□□□ -1.75
CDC42BPA-209ENST00000448940 WFDC1Q9HC57 220 aa4.09□□□□□ -1.75
CDC42BPA-209ENST00000448940 CSDC2Q9Y534 153 aaKnown RBP4.09□□□□□ -1.75
CDC42BPA-209ENST00000448940 VCANP13611 3396 aa4.09□□□□□ -1.75
CDC42BPA-209ENST00000448940 TRBV6-4A0A1B0GX49 114 aa4.09□□□□□ -1.75
CDC42BPA-209ENST00000448940 MDFICQ9P1T7 246 aa4.09□□□□□ -1.75
CDC42BPA-209ENST00000448940 IGLV9-49A0A0B4J1Y8 123 aa4.09□□□□□ -1.76
CDC42BPA-209ENST00000448940 K7EN84 100 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms