RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 PLA2G2DQ9UNK4 145 aa11.49□□□□□ -0.57
COL9A1-205ENST00000447041 LINC00959A0A1B0GUT2 108 aa11.48□□□□□ -0.57
COL9A1-205ENST00000447041 ZNF727A8MUV8 499 aa11.48□□□□□ -0.57
COL9A1-205ENST00000447041 CCL25O15444 150 aa11.48□□□□□ -0.57
COL9A1-205ENST00000447041 RAB4AP20338 218 aa11.48□□□□□ -0.57
COL9A1-205ENST00000447041 Q6ZRU5 148 aa11.48□□□□□ -0.57
COL9A1-205ENST00000447041 AMN1Q8IY45 258 aa11.48□□□□□ -0.57
COL9A1-205ENST00000447041 SRP19P09132 144 aaKnown RBP11.47□□□□□ -0.57
COL9A1-205ENST00000447041 POLR2KP53803 58 aaKnown RBP11.47□□□□□ -0.57
COL9A1-205ENST00000447041 LINC00526Q96FQ7 95 aa11.47□□□□□ -0.57
COL9A1-205ENST00000447041 OSTCQ9NRP0 149 aa11.47□□□□□ -0.57
COL9A1-205ENST00000447041 A0A096LNI7 61 aa11.46□□□□□ -0.57
COL9A1-205ENST00000447041 SMKR1H3BMG3 65 aa11.46□□□□□ -0.57
COL9A1-205ENST00000447041 C7orf33Q8WU49 177 aa11.46□□□□□ -0.57
COL9A1-205ENST00000447041 V9GYV3 84 aa11.46□□□□□ -0.57
COL9A1-205ENST00000447041 TRBV27A0A0K0K1C4 114 aa11.45□□□□□ -0.58
COL9A1-205ENST00000447041 C7orf77A4D0Y5 90 aa11.45□□□□□ -0.58
COL9A1-205ENST00000447041 MRPL52Q86TS9 123 aaKnown RBP11.45□□□□□ -0.58
COL9A1-205ENST00000447041 STPG4Q8N801 248 aa11.45□□□□□ -0.58
COL9A1-205ENST00000447041 CDC42SE2Q9NRR3 84 aa11.45□□□□□ -0.58
COL9A1-205ENST00000447041 UBR4Q5T4S7 5183 aa11.44□□□□□ -0.58
COL9A1-205ENST00000447041 IGHV1-58A0A0C4DH39 117 aa11.44□□□□□ -0.58
COL9A1-205ENST00000447041 NUP35Q8NFH5 326 aa11.44□□□□□ -0.58
COL9A1-205ENST00000447041 SS18Q15532 418 aa11.43□□□□□ -0.58
COL9A1-205ENST00000447041 ISOC2Q96AB3 205 aa11.43□□□□□ -0.58
COL9A1-205ENST00000447041 RIGQ13278 110 aa11.42□□□□□ -0.58
COL9A1-205ENST00000447041 CD164L2Q6UWJ8 174 aa11.42□□□□□ -0.58
COL9A1-205ENST00000447041 ZNF664Q8N3J9 261 aa11.42□□□□□ -0.58
COL9A1-205ENST00000447041 NRACQ8N912 160 aa11.42□□□□□ -0.58
COL9A1-205ENST00000447041 CARD19Q96LW7 228 aa11.42□□□□□ -0.58
COL9A1-205ENST00000447041 TNXBP22105 4242 aa11.42□□□□□ -0.58
COL9A1-205ENST00000447041 PRR3P79522 188 aaKnown RBP11.41□□□□□ -0.58
COL9A1-205ENST00000447041 FCER1GP30273 86 aa11.4□□□□□ -0.58
COL9A1-205ENST00000447041 RPL23P62829 140 aaKnown RBP11.4□□□□□ -0.58
COL9A1-205ENST00000447041 RNASE13Q5GAN3 156 aaKnown RBP11.4□□□□□ -0.58
COL9A1-205ENST00000447041 VCYO14598 125 aa11.39□□□□□ -0.59
COL9A1-205ENST00000447041 SUMO2P61956 95 aaKnown RBP11.39□□□□□ -0.59
COL9A1-205ENST00000447041 NAT8BQ9UHF3 227 aa11.39□□□□□ -0.59
COL9A1-205ENST00000447041 UBE2D4Q9Y2X8 147 aa11.39□□□□□ -0.59
COL9A1-205ENST00000447041 C9JQL5 133 aa11.38□□□□□ -0.59
COL9A1-205ENST00000447041 ZNF561-AS1K7EIQ3 104 aa11.38□□□□□ -0.59
COL9A1-205ENST00000447041 SYCNQ0VAF6 134 aa11.38□□□□□ -0.59
COL9A1-205ENST00000447041 ADIRFQ15847 76 aa11.38□□□□□ -0.59
COL9A1-205ENST00000447041 TMEM241Q24JQ0 296 aa11.38□□□□□ -0.59
COL9A1-205ENST00000447041 CAMPP49913 170 aa11.37□□□□□ -0.59
COL9A1-205ENST00000447041 MRPL51Q4U2R6 128 aaKnown RBP11.37□□□□□ -0.59
COL9A1-205ENST00000447041 LINC00474Q9P2X8 69 aa11.37□□□□□ -0.59
COL9A1-205ENST00000447041 A0A1B0GVG6 124 aa11.36□□□□□ -0.59
COL9A1-205ENST00000447041 PPP1R17O96001 155 aa11.36□□□□□ -0.59
COL9A1-205ENST00000447041 FAM74A3Q4VXF1 159 aa11.36□□□□□ -0.59
COL9A1-205ENST00000447041 FAM104BQ5XKR9 115 aa11.36□□□□□ -0.59
COL9A1-205ENST00000447041 Q6ZUT4 128 aa11.36□□□□□ -0.59
COL9A1-205ENST00000447041 KIR2DL4Q99706 377 aa11.36□□□□□ -0.59
COL9A1-205ENST00000447041 NAT8Q9UHE5 227 aa11.36□□□□□ -0.59
COL9A1-205ENST00000447041 PKIGQ9Y2B9 76 aa11.36□□□□□ -0.59
COL9A1-205ENST00000447041 CSDC2Q9Y534 153 aaKnown RBP11.36□□□□□ -0.59
COL9A1-205ENST00000447041 IGLV4-69A0A075B6H9 119 aa11.35□□□□□ -0.59
COL9A1-205ENST00000447041 C1orf196B1AJZ1 125 aa11.35□□□□□ -0.59
COL9A1-205ENST00000447041 PPP1R2P9O14990 202 aa11.35□□□□□ -0.59
COL9A1-205ENST00000447041 SRSF3P84103 164 aaKnown RBP11.35□□□□□ -0.59
COL9A1-205ENST00000447041 TRAV13-1A0A0B4J241 112 aa11.34□□□□□ -0.59
COL9A1-205ENST00000447041 SMIM27A0A1W2PRY6 76 aa11.34□□□□□ -0.59
COL9A1-205ENST00000447041 COX7A2LO14548 114 aa11.34□□□□□ -0.59
COL9A1-205ENST00000447041 MALP21145 153 aa11.34□□□□□ -0.59
COL9A1-205ENST00000447041 PTTG1IPP53801 180 aa11.33□□□□□ -0.6
COL9A1-205ENST00000447041 SMAGPQ0VAQ4 97 aa11.32□□□□□ -0.6
COL9A1-205ENST00000447041 GAGE2BQ13066 116 aa11.32□□□□□ -0.6
COL9A1-205ENST00000447041 LOC107984640A0A0U1RRK4 108 aa11.31□□□□□ -0.6
COL9A1-205ENST00000447041 CKS2P33552 79 aa11.31□□□□□ -0.6
COL9A1-205ENST00000447041 RPL39P62891 51 aaKnown RBP11.31□□□□□ -0.6
COL9A1-205ENST00000447041 C5orf38Q86SI9 138 aa11.31□□□□□ -0.6
COL9A1-205ENST00000447041 LINC01600Q96MT4 127 aa11.31□□□□□ -0.6
COL9A1-205ENST00000447041 CAMK2N2Q96S95 79 aa11.31□□□□□ -0.6
COL9A1-205ENST00000447041 C20orf78Q9BR46 151 aa11.31□□□□□ -0.6
COL9A1-205ENST00000447041 TIMM21Q9BVV7 248 aa11.31□□□□□ -0.6
COL9A1-205ENST00000447041 TRBV24-1A0A075B6N3 115 aa11.3□□□□□ -0.6
COL9A1-205ENST00000447041 LINC00862A6NCI5 91 aa11.3□□□□□ -0.6
COL9A1-205ENST00000447041 MRPL54Q6P161 138 aaKnown RBP11.3□□□□□ -0.6
COL9A1-205ENST00000447041 TMEM18Q96B42 140 aa11.3□□□□□ -0.6
COL9A1-205ENST00000447041 A0A1B0GW15 77 aa11.29□□□□□ -0.6
COL9A1-205ENST00000447041 D6R8Y8 96 aa11.29□□□□□ -0.6
COL9A1-205ENST00000447041 TNFRSF6BO95407 300 aa11.29□□□□□ -0.6
COL9A1-205ENST00000447041 RPL32P62910 135 aaKnown RBP11.29□□□□□ -0.6
COL9A1-205ENST00000447041 ODF1Q14990 250 aa11.29□□□□□ -0.6
COL9A1-205ENST00000447041 PEA15Q15121 130 aa11.29□□□□□ -0.6
COL9A1-205ENST00000447041 FAM104AQ969W3 186 aa11.29□□□□□ -0.6
COL9A1-205ENST00000447041 SMIM2Q9BVW6 85 aa11.29□□□□□ -0.6
COL9A1-205ENST00000447041 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.28□□□□□ -0.6
COL9A1-205ENST00000447041 SPAG11BQ08648 103 aa11.28□□□□□ -0.6
COL9A1-205ENST00000447041 SPINK6Q6UWN8 80 aa11.28□□□□□ -0.6
COL9A1-205ENST00000447041 Q6ZRP5 223 aa11.28□□□□□ -0.6
COL9A1-205ENST00000447041 A0A1B0GXF2 115 aa11.27□□□□□ -0.61
COL9A1-205ENST00000447041 A0A1W2PNN7 141 aa11.27□□□□□ -0.61
COL9A1-205ENST00000447041 APOMO95445 188 aa11.27□□□□□ -0.61
COL9A1-205ENST00000447041 NPYP01303 97 aa11.27□□□□□ -0.61
COL9A1-205ENST00000447041 HBBP68871 147 aa11.27□□□□□ -0.61
COL9A1-205ENST00000447041 C2orf48Q96LS8 159 aa11.27□□□□□ -0.61
COL9A1-205ENST00000447041 A0A0J9YXV3 536 aa11.26□□□□□ -0.61
COL9A1-205ENST00000447041 RPL18AQ02543 176 aaKnown RBP11.26□□□□□ -0.61
COL9A1-205ENST00000447041 OPRPNQ99935 248 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms