RNA–Protein interactions for RNA: ENST00000446225.5

MCF2-206, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-206ENST00000446225 TP73-AS1Q9UF72 201 aa4.24□□□□□ -1.73
MCF2-206ENST00000446225 C2orf70A6NJV1 201 aa4.23□□□□□ -1.73
MCF2-206ENST00000446225 G3V3Q6 166 aa4.23□□□□□ -1.73
MCF2-206ENST00000446225 APOC3P02656 99 aa4.23□□□□□ -1.73
MCF2-206ENST00000446225 SRP19P09132 144 aaKnown RBP4.23□□□□□ -1.73
MCF2-206ENST00000446225 TLX1NBP0CAT3 122 aa4.23□□□□□ -1.73
MCF2-206ENST00000446225 PYYP10082 97 aa4.23□□□□□ -1.73
MCF2-206ENST00000446225 CRYBB3P26998 211 aa4.23□□□□□ -1.73
MCF2-206ENST00000446225 RNASE13Q5GAN3 156 aaKnown RBP4.23□□□□□ -1.73
MCF2-206ENST00000446225 PCP2Q8IVA1 136 aa4.23□□□□□ -1.73
MCF2-206ENST00000446225 IGHV7-4-1A0A0J9YVY3 117 aa4.23□□□□□ -1.73
MCF2-206ENST00000446225 C7orf66A4D0T2 115 aa4.23□□□□□ -1.73
MCF2-206ENST00000446225 NDUFA4O00483 81 aa4.23□□□□□ -1.73
MCF2-206ENST00000446225 IGKV1-17P01599 117 aa4.23□□□□□ -1.73
MCF2-206ENST00000446225 TCRAP04437 139 aa4.23□□□□□ -1.73
MCF2-206ENST00000446225 ZNF688P0C7X2 276 aa4.23□□□□□ -1.73
MCF2-206ENST00000446225 SLC25A4P12235 298 aa4.23□□□□□ -1.73
MCF2-206ENST00000446225 CBLN1P23435 193 aa4.23□□□□□ -1.73
MCF2-206ENST00000446225 ZNF90Q03938 601 aa4.23□□□□□ -1.73
MCF2-206ENST00000446225 RNF182Q8N6D2 247 aa4.23□□□□□ -1.73
MCF2-206ENST00000446225 C11orf1Q9H5F2 150 aa4.23□□□□□ -1.73
MCF2-206ENST00000446225 IGHV3-49A0A0A0MS15 119 aa4.22□□□□□ -1.73
MCF2-206ENST00000446225 FAM24AA6NFZ4 105 aa4.22□□□□□ -1.73
MCF2-206ENST00000446225 COLCA2A8K830 154 aa4.22□□□□□ -1.73
MCF2-206ENST00000446225 KRTAP29-1A8MX34 341 aaPredicted RBP4.22□□□□□ -1.73
MCF2-206ENST00000446225 BPY2O14599 106 aa4.22□□□□□ -1.73
MCF2-206ENST00000446225 IGLV1-51P01701 117 aa4.22□□□□□ -1.73
MCF2-206ENST00000446225 DEFB114Q30KQ6 69 aa4.22□□□□□ -1.73
MCF2-206ENST00000446225 C14orf177Q52M58 125 aa4.22□□□□□ -1.73
MCF2-206ENST00000446225 PHF5AQ7RTV0 110 aaKnown RBP4.22□□□□□ -1.73
MCF2-206ENST00000446225 ATOH7Q8N100 152 aa4.22□□□□□ -1.73
MCF2-206ENST00000446225 MRPS16Q9Y3D3 137 aaKnown RBP4.22□□□□□ -1.73
MCF2-206ENST00000446225 IGKV1D-37A0A075B6S9 117 aa4.21□□□□□ -1.74
MCF2-206ENST00000446225 C11orf94C9JXX5 98 aa4.21□□□□□ -1.74
MCF2-206ENST00000446225 K7EIL1 84 aa4.21□□□□□ -1.74
MCF2-206ENST00000446225 UQCRQO14949 82 aa4.21□□□□□ -1.74
MCF2-206ENST00000446225 CMC4P56277 68 aaPredicted RBP4.21□□□□□ -1.74
MCF2-206ENST00000446225 Q6ZUT4 128 aa4.21□□□□□ -1.74
MCF2-206ENST00000446225 C10orf126Q8N4M7 172 aa4.21□□□□□ -1.74
MCF2-206ENST00000446225 C15orf56Q8N910 161 aa4.21□□□□□ -1.74
MCF2-206ENST00000446225 OR4B1Q8NGF8 309 aa4.21□□□□□ -1.74
MCF2-206ENST00000446225 NMES1Q9C002 83 aa4.21□□□□□ -1.74
MCF2-206ENST00000446225 TRAV14DV4A0A0A6YYC5 116 aa4.21□□□□□ -1.74
MCF2-206ENST00000446225 TMEM262E9PQX1 116 aa4.21□□□□□ -1.74
MCF2-206ENST00000446225 MT-ND6P03923 174 aa4.21□□□□□ -1.74
MCF2-206ENST00000446225 HIST1H2BOP23527 126 aa4.21□□□□□ -1.74
MCF2-206ENST00000446225 HIST1H2BBP33778 126 aa4.21□□□□□ -1.74
MCF2-206ENST00000446225 HIST1H2BDP58876 126 aa4.21□□□□□ -1.74
MCF2-206ENST00000446225 YPEL3P61236 119 aaPredicted RBP4.21□□□□□ -1.74
MCF2-206ENST00000446225 HIST1H2BCP62807 126 aa4.21□□□□□ -1.74
MCF2-206ENST00000446225 HBBP68871 147 aa4.21□□□□□ -1.74
MCF2-206ENST00000446225 HIST2H2BEQ16778 126 aa4.21□□□□□ -1.74
MCF2-206ENST00000446225 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.21□□□□□ -1.74
MCF2-206ENST00000446225 DYNLRB2Q8TF09 96 aa4.21□□□□□ -1.74
MCF2-206ENST00000446225 HIST1H2BHQ93079 126 aa4.21□□□□□ -1.74
MCF2-206ENST00000446225 LINC00526Q96FQ7 95 aa4.21□□□□□ -1.74
MCF2-206ENST00000446225 HYLS1Q96M11 299 aa4.21□□□□□ -1.74
MCF2-206ENST00000446225 HIST1H2BNQ99877 126 aa4.21□□□□□ -1.74
MCF2-206ENST00000446225 HIST1H2BMQ99879 126 aa4.21□□□□□ -1.74
MCF2-206ENST00000446225 SEC11CQ9BY50 192 aa4.21□□□□□ -1.74
MCF2-206ENST00000446225 TRAV12-2A0A075B6T6 113 aa4.2□□□□□ -1.74
MCF2-206ENST00000446225 IGKV1OR2-108A0A075B7D4 117 aa4.2□□□□□ -1.74
MCF2-206ENST00000446225 TRBV27A0A0K0K1C4 114 aa4.2□□□□□ -1.74
MCF2-206ENST00000446225 TMEM256-PLSCR3K7ERE1 68 aa4.2□□□□□ -1.74
MCF2-206ENST00000446225 CXCL1P09341 107 aa4.2□□□□□ -1.74
MCF2-206ENST00000446225 HLA-DRB4P13762 266 aa4.2□□□□□ -1.74
MCF2-206ENST00000446225 DEFB121Q5J5C9 76 aa4.2□□□□□ -1.74
MCF2-206ENST00000446225 SCXQ7RTU7 201 aa4.2□□□□□ -1.74
MCF2-206ENST00000446225 TEN1Q86WV5 123 aa4.2□□□□□ -1.74
MCF2-206ENST00000446225 OR10P1Q8NGE3 313 aa4.2□□□□□ -1.74
MCF2-206ENST00000446225 PPP1R1CQ8WVI7 109 aa4.2□□□□□ -1.74
MCF2-206ENST00000446225 PYGO2Q9BRQ0 406 aa4.2□□□□□ -1.74
MCF2-206ENST00000446225 RHPN1-AS1Q9BWJ2 59 aa4.2□□□□□ -1.74
MCF2-206ENST00000446225 SMCO4Q9NRQ5 59 aa4.2□□□□□ -1.74
MCF2-206ENST00000446225 HLA-DRB4X5D2U9 266 aa4.2□□□□□ -1.74
MCF2-206ENST00000446225 C9JCJ5 164 aa4.19□□□□□ -1.74
MCF2-206ENST00000446225 NPPCP23582 126 aa4.19□□□□□ -1.74
MCF2-206ENST00000446225 CCL20P78556 96 aa4.19□□□□□ -1.74
MCF2-206ENST00000446225 AKR1C1Q04828 323 aa4.19□□□□□ -1.74
MCF2-206ENST00000446225 LUZP6Q538Z0 58 aa4.19□□□□□ -1.74
MCF2-206ENST00000446225 C9orf153Q5TBE3 101 aa4.19□□□□□ -1.74
MCF2-206ENST00000446225 HIST3H2BBQ8N257 126 aa4.19□□□□□ -1.74
MCF2-206ENST00000446225 COPS9Q8WXC6 57 aa4.19□□□□□ -1.74
MCF2-206ENST00000446225 TRGV9Q99603 122 aa4.19□□□□□ -1.74
MCF2-206ENST00000446225 AGPAT4-IT1Q9H0P7 198 aa4.19□□□□□ -1.74
MCF2-206ENST00000446225 IL4P05112 153 aa4.19□□□□□ -1.74
MCF2-206ENST00000446225 CHCHD7Q9BUK0 85 aa4.19□□□□□ -1.74
MCF2-206ENST00000446225 NPVFQ9HCQ7 196 aa4.19□□□□□ -1.74
MCF2-206ENST00000446225 SORL1Q92673 2214 aa4.18□□□□□ -1.74
MCF2-206ENST00000446225 IGKV3-7A0A075B6H7 116 aa4.18□□□□□ -1.74
MCF2-206ENST00000446225 A8MWL6 223 aa4.18□□□□□ -1.74
MCF2-206ENST00000446225 H3BQ15 152 aa4.18□□□□□ -1.74
MCF2-206ENST00000446225 SLC25A5P05141 298 aaKnown RBP4.18□□□□□ -1.74
MCF2-206ENST00000446225 CD7P09564 240 aa4.18□□□□□ -1.74
MCF2-206ENST00000446225 UBE2BP63146 152 aa4.18□□□□□ -1.74
MCF2-206ENST00000446225 KHDC3LQ587J8 217 aa4.18□□□□□ -1.74
MCF2-206ENST00000446225 NTM-AS1Q6ZSK4 140 aa4.18□□□□□ -1.74
MCF2-206ENST00000446225 CYP2G1PQ6ZSU1 146 aa4.18□□□□□ -1.74
MCF2-206ENST00000446225 GTSCR1Q86UQ5 136 aa4.18□□□□□ -1.74
MCF2-206ENST00000446225 AQP10Q96PS8 301 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms