RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 RPL13AP40429 203 aaKnown RBP10.32□□□□□ -0.76
ERCC3-203ENST00000445889 C11orf44Q8N8P7 122 aa10.32□□□□□ -0.76
ERCC3-203ENST00000445889 UBE2D4Q9Y2X8 147 aa10.32□□□□□ -0.76
ERCC3-203ENST00000445889 IGHV3-53P01767 116 aa10.32□□□□□ -0.76
ERCC3-203ENST00000445889 MIAQ16674 131 aa10.32□□□□□ -0.76
ERCC3-203ENST00000445889 TMEM61Q8N0U2 210 aa10.32□□□□□ -0.76
ERCC3-203ENST00000445889 PYGO1Q9Y3Y4 419 aa10.32□□□□□ -0.76
ERCC3-203ENST00000445889 NBPF19A0A087WUL8 3843 aa10.31□□□□□ -0.76
ERCC3-203ENST00000445889 UBE2E2Q96LR5 201 aa10.31□□□□□ -0.76
ERCC3-203ENST00000445889 XCL2Q9UBD3 114 aa10.31□□□□□ -0.76
ERCC3-203ENST00000445889 IFITM1P13164 125 aa10.3□□□□□ -0.76
ERCC3-203ENST00000445889 DGAT2L7PQ6IED9 249 aa10.3□□□□□ -0.76
ERCC3-203ENST00000445889 M0QXV9 152 aa10.3□□□□□ -0.76
ERCC3-203ENST00000445889 TRAV13-1A0A0B4J241 112 aa10.29□□□□□ -0.76
ERCC3-203ENST00000445889 ZNF462Q96JM2 2506 aa10.29□□□□□ -0.76
ERCC3-203ENST00000445889 TINCRA0A1B0GVN0 87 aa10.29□□□□□ -0.76
ERCC3-203ENST00000445889 SPANXDQ9BXN6 97 aa10.29□□□□□ -0.76
ERCC3-203ENST00000445889 SPANXCQ9NY87 97 aa10.29□□□□□ -0.76
ERCC3-203ENST00000445889 LINC00694P0DN24 101 aa10.28□□□□□ -0.76
ERCC3-203ENST00000445889 TMEM101Q96IK0 257 aa10.28□□□□□ -0.76
ERCC3-203ENST00000445889 Q9H8V8 135 aa10.27□□□□□ -0.76
ERCC3-203ENST00000445889 ZNF702PQ9H963 129 aa10.27□□□□□ -0.77
ERCC3-203ENST00000445889 GAGE12JA6NER3 117 aa10.26□□□□□ -0.77
ERCC3-203ENST00000445889 LST1O00453 97 aa10.26□□□□□ -0.77
ERCC3-203ENST00000445889 GAGE7O76087 117 aa10.26□□□□□ -0.77
ERCC3-203ENST00000445889 GAGE12FP0CL80 117 aa10.26□□□□□ -0.77
ERCC3-203ENST00000445889 GAGE12GP0CL81 117 aa10.26□□□□□ -0.77
ERCC3-203ENST00000445889 GAGE12IP0CL82 117 aa10.26□□□□□ -0.77
ERCC3-203ENST00000445889 GAGE4Q13068 117 aa10.26□□□□□ -0.77
ERCC3-203ENST00000445889 Q8N2B8 174 aa10.26□□□□□ -0.77
ERCC3-203ENST00000445889 C3orf56Q8N813 242 aa10.26□□□□□ -0.77
ERCC3-203ENST00000445889 CITED2Q99967 270 aaPredicted RBP10.26□□□□□ -0.77
ERCC3-203ENST00000445889 SPANXA1Q9NS26 97 aa10.25□□□□□ -0.77
ERCC3-203ENST00000445889 FN1P02751 2386 aaKnown RBP10.25□□□□□ -0.77
ERCC3-203ENST00000445889 PRORYQ9H606 182 aa10.25□□□□□ -0.77
ERCC3-203ENST00000445889 TRGV1A0A0A0MS02 117 aa10.24□□□□□ -0.77
ERCC3-203ENST00000445889 A0A1W2PRX2 142 aa10.24□□□□□ -0.77
ERCC3-203ENST00000445889 ZNF415Q09FC8 603 aa10.24□□□□□ -0.77
ERCC3-203ENST00000445889 VPREB3Q9UKI3 123 aa10.24□□□□□ -0.77
ERCC3-203ENST00000445889 IGKV3OR2-268A0A0C4DH90 116 aa10.24□□□□□ -0.77
ERCC3-203ENST00000445889 H3BT86 120 aa10.24□□□□□ -0.77
ERCC3-203ENST00000445889 LINC01356Q8N9X3 169 aa10.24□□□□□ -0.77
ERCC3-203ENST00000445889 CHCHD5Q9BSY4 110 aa10.24□□□□□ -0.77
ERCC3-203ENST00000445889 C11orf72Q8NBR9 251 aa10.23□□□□□ -0.77
ERCC3-203ENST00000445889 MAP6D1Q9H9H5 199 aa10.23□□□□□ -0.77
ERCC3-203ENST00000445889 YAE1D1Q9NRH1 226 aa10.23□□□□□ -0.77
ERCC3-203ENST00000445889 TMEM89A2RUT3 159 aa10.23□□□□□ -0.77
ERCC3-203ENST00000445889 SOSTDC1Q6X4U4 206 aa10.23□□□□□ -0.77
ERCC3-203ENST00000445889 DYNLRB2Q8TF09 96 aa10.23□□□□□ -0.77
ERCC3-203ENST00000445889 LINC00308Q8TCZ7 52 aa10.23□□□□□ -0.77
ERCC3-203ENST00000445889 CIRBPQ14011 172 aaKnown RBP10.22□□□□□ -0.77
ERCC3-203ENST00000445889 PIK3CD-AS1Q5SR53 167 aa10.22□□□□□ -0.77
ERCC3-203ENST00000445889 LINC00242Q5T6M2 205 aa10.22□□□□□ -0.77
ERCC3-203ENST00000445889 NBEAL2Q6ZNJ1 2754 aa10.22□□□□□ -0.77
ERCC3-203ENST00000445889 MTORP42345 2549 aa10.22□□□□□ -0.77
ERCC3-203ENST00000445889 SETXQ7Z333 2677 aaKnown RBP10.21□□□□□ -0.77
ERCC3-203ENST00000445889 MEIG1Q5JSS6 88 aa10.21□□□□□ -0.77
ERCC3-203ENST00000445889 PLA2G2AP14555 144 aa10.21□□□□□ -0.78
ERCC3-203ENST00000445889 NDUFA1O15239 70 aa10.2□□□□□ -0.78
ERCC3-203ENST00000445889 Q6ZTI0 123 aa10.2□□□□□ -0.78
ERCC3-203ENST00000445889 SVIPQ8NHG7 77 aa10.2□□□□□ -0.78
ERCC3-203ENST00000445889 PRB1P04280 392 aa10.2□□□□□ -0.78
ERCC3-203ENST00000445889 PRIMA1Q86XR5 153 aa10.2□□□□□ -0.78
ERCC3-203ENST00000445889 EDA2RQ9HAV5 297 aa10.2□□□□□ -0.78
ERCC3-203ENST00000445889 ACANP16112 2415 aa10.19□□□□□ -0.78
ERCC3-203ENST00000445889 NTM-AS1Q6ZSK4 140 aa10.19□□□□□ -0.78
ERCC3-203ENST00000445889 KRTAP10-9P60411 292 aa10.19□□□□□ -0.78
ERCC3-203ENST00000445889 Q6Q795 121 aa10.19□□□□□ -0.78
ERCC3-203ENST00000445889 LINC01600Q96MT4 127 aa10.19□□□□□ -0.78
ERCC3-203ENST00000445889 Q6YL49 198 aa10.18□□□□□ -0.78
ERCC3-203ENST00000445889 LOC100131303A0A0U1RQF7 123 aa10.17□□□□□ -0.78
ERCC3-203ENST00000445889 SMIM1B2RUZ4 78 aa10.17□□□□□ -0.78
ERCC3-203ENST00000445889 INSP01308 110 aa10.17□□□□□ -0.78
ERCC3-203ENST00000445889 TIRAPP58753 221 aa10.17□□□□□ -0.78
ERCC3-203ENST00000445889 DEFB114Q30KQ6 69 aa10.17□□□□□ -0.78
ERCC3-203ENST00000445889 SMIM20Q8N5G0 67 aa10.17□□□□□ -0.78
ERCC3-203ENST00000445889 RNF152Q8N8N0 203 aa10.17□□□□□ -0.78
ERCC3-203ENST00000445889 Q9HAA7 133 aa10.17□□□□□ -0.78
ERCC3-203ENST00000445889 TOMM7Q9P0U1 55 aa10.17□□□□□ -0.78
ERCC3-203ENST00000445889 TIMM17BO60830 172 aa10.17□□□□□ -0.78
ERCC3-203ENST00000445889 C1orf158Q8N1D5 194 aa10.17□□□□□ -0.78
ERCC3-203ENST00000445889 Q96MF0 132 aa10.17□□□□□ -0.78
ERCC3-203ENST00000445889 WFDC10AQ9H1F0 79 aa10.16□□□□□ -0.78
ERCC3-203ENST00000445889 HERVK_113P63121 156 aa10.16□□□□□ -0.78
ERCC3-203ENST00000445889 DAZ2Q13117 558 aaKnown RBP10.16□□□□□ -0.78
ERCC3-203ENST00000445889 ODF3L2Q3SX64 289 aa10.16□□□□□ -0.78
ERCC3-203ENST00000445889 DAZ4Q86SG3 579 aaKnown RBP10.16□□□□□ -0.78
ERCC3-203ENST00000445889 FAM218AQ96MZ4 157 aa10.16□□□□□ -0.78
ERCC3-203ENST00000445889 DAZ3Q9NR90 486 aaKnown RBP10.16□□□□□ -0.78
ERCC3-203ENST00000445889 A0A096LNT2 108 aa10.15□□□□□ -0.78
ERCC3-203ENST00000445889 COX7A2LO14548 114 aa10.15□□□□□ -0.78
ERCC3-203ENST00000445889 RS1O15537 224 aa10.15□□□□□ -0.78
ERCC3-203ENST00000445889 NOP10Q9NPE3 64 aaKnown RBP10.15□□□□□ -0.78
ERCC3-203ENST00000445889 IGLV5-45A0A087WSX0 123 aa10.15□□□□□ -0.78
ERCC3-203ENST00000445889 FAM236AA0A1B0GUQ0 79 aa10.15□□□□□ -0.78
ERCC3-203ENST00000445889 FAM236BA0A1B0GV22 79 aa10.15□□□□□ -0.78
ERCC3-203ENST00000445889 STHQ8IWL8 128 aa10.15□□□□□ -0.78
ERCC3-203ENST00000445889 SMCR5Q8TEV8 140 aa10.14□□□□□ -0.79
ERCC3-203ENST00000445889 DNAJC30Q96LL9 226 aa10.14□□□□□ -0.79
ERCC3-203ENST00000445889 PEMTQ9UBM1 199 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms