RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 OR5A1Q8NGJ0 315 aa12.12□□□□□ -0.47
CCDC188-202ENST00000444532 IGKV3OR2-268A0A0C4DH90 116 aa12.11□□□□□ -0.47
CCDC188-202ENST00000444532 PPBPP02775 128 aa12.11□□□□□ -0.47
CCDC188-202ENST00000444532 SMR3BP02814 79 aaPredicted RBP12.11□□□□□ -0.47
CCDC188-202ENST00000444532 TCAPO15273 167 aa12.1□□□□□ -0.47
CCDC188-202ENST00000444532 TNFRSF6BO95407 300 aa12.1□□□□□ -0.47
CCDC188-202ENST00000444532 SMAGPQ0VAQ4 97 aa12.1□□□□□ -0.47
CCDC188-202ENST00000444532 SLC7A5P1Q8MH63 180 aa12.1□□□□□ -0.47
CCDC188-202ENST00000444532 GAGE12HA6NDE8 117 aa12.09□□□□□ -0.47
CCDC188-202ENST00000444532 D6R8Y8 96 aa12.09□□□□□ -0.47
CCDC188-202ENST00000444532 PHOX2AO14813 284 aa12.09□□□□□ -0.47
CCDC188-202ENST00000444532 CHCHD10Q8WYQ3 142 aaPredicted RBP12.09□□□□□ -0.47
CCDC188-202ENST00000444532 CTDSP1Q9GZU7 261 aa12.09□□□□□ -0.47
CCDC188-202ENST00000444532 CDC42SE2Q9NRR3 84 aa12.09□□□□□ -0.47
CCDC188-202ENST00000444532 hDV102S1A0JD36 115 aa12.08□□□□□ -0.48
CCDC188-202ENST00000444532 FAM229AH3BQW9 127 aa12.08□□□□□ -0.48
CCDC188-202ENST00000444532 Q5VSD8 79 aa12.08□□□□□ -0.48
CCDC188-202ENST00000444532 CFAP161Q6P656 301 aa12.08□□□□□ -0.48
CCDC188-202ENST00000444532 ZNF664Q8N3J9 261 aa12.08□□□□□ -0.48
CCDC188-202ENST00000444532 C9orf163Q8N9P6 203 aa12.08□□□□□ -0.48
CCDC188-202ENST00000444532 CSDC2Q9Y534 153 aaKnown RBP12.08□□□□□ -0.48
CCDC188-202ENST00000444532 ORMDL3Q8N138 153 aa12.07□□□□□ -0.48
CCDC188-202ENST00000444532 TMEM18Q96B42 140 aa12.07□□□□□ -0.48
CCDC188-202ENST00000444532 IMMP2LQ96T52 175 aa12.07□□□□□ -0.48
CCDC188-202ENST00000444532 LINC00959A0A1B0GUT2 108 aa12.06□□□□□ -0.48
CCDC188-202ENST00000444532 APOC3P02656 99 aa12.06□□□□□ -0.48
CCDC188-202ENST00000444532 CNBPP62633 177 aaKnown RBP12.06□□□□□ -0.48
CCDC188-202ENST00000444532 SMIM2Q9BVW6 85 aa12.06□□□□□ -0.48
CCDC188-202ENST00000444532 AP5S1Q9NUS5 200 aa12.06□□□□□ -0.48
CCDC188-202ENST00000444532 NPYP01303 97 aa12.05□□□□□ -0.48
CCDC188-202ENST00000444532 SS18Q15532 418 aa12.05□□□□□ -0.48
CCDC188-202ENST00000444532 TMEM136Q6ZRR5 245 aa12.05□□□□□ -0.48
CCDC188-202ENST00000444532 CHAC1Q9BUX1 264 aa12.05□□□□□ -0.48
CCDC188-202ENST00000444532 TIMM21Q9BVV7 248 aa12.05□□□□□ -0.48
CCDC188-202ENST00000444532 RPS10P5Q9NQ39 176 aa12.05□□□□□ -0.48
CCDC188-202ENST00000444532 UBE2D4Q9Y2X8 147 aa12.05□□□□□ -0.48
CCDC188-202ENST00000444532 RHEBQ15382 184 aa12.04□□□□□ -0.48
CCDC188-202ENST00000444532 DNAH8Q96JB1 4490 aa12.03□□□□□ -0.48
CCDC188-202ENST00000444532 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.03□□□□□ -0.48
CCDC188-202ENST00000444532 FOXI1Q12951 378 aa12.03□□□□□ -0.48
CCDC188-202ENST00000444532 SCXQ7RTU7 201 aa12.03□□□□□ -0.48
CCDC188-202ENST00000444532 C15orf56Q8N910 161 aa12.03□□□□□ -0.48
CCDC188-202ENST00000444532 PRELID3AQ96N28 172 aa12.03□□□□□ -0.48
CCDC188-202ENST00000444532 ABCA13Q86UQ4 5058 aa12.03□□□□□ -0.48
CCDC188-202ENST00000444532 CCL25O15444 150 aa12.02□□□□□ -0.49
CCDC188-202ENST00000444532 XCL1P47992 114 aa12.02□□□□□ -0.49
CCDC188-202ENST00000444532 NDUFA5Q16718 116 aa12.02□□□□□ -0.49
CCDC188-202ENST00000444532 LAMTOR2Q9Y2Q5 125 aa12.02□□□□□ -0.49
CCDC188-202ENST00000444532 PRSS47A8MTI9 375 aa12.01□□□□□ -0.49
CCDC188-202ENST00000444532 SLPIP03973 132 aa12.01□□□□□ -0.49
CCDC188-202ENST00000444532 SDIM1Q6ZPB5 146 aa12.01□□□□□ -0.49
CCDC188-202ENST00000444532 SVBPQ8N300 66 aa12.01□□□□□ -0.49
CCDC188-202ENST00000444532 C1orf196B1AJZ1 125 aa12□□□□□ -0.49
CCDC188-202ENST00000444532 SNAPINO95295 136 aa12□□□□□ -0.49
CCDC188-202ENST00000444532 CD164L2Q6UWJ8 174 aa12□□□□□ -0.49
CCDC188-202ENST00000444532 CIRBP-AS1Q8TBR5 109 aa12□□□□□ -0.49
CCDC188-202ENST00000444532 SRRM2Q9UQ35 2752 aaKnown RBP11.99□□□□□ -0.49
CCDC188-202ENST00000444532 IGHV3-64A0A075B6Q5 118 aa11.99□□□□□ -0.49
CCDC188-202ENST00000444532 GVQW2A0A096LPI5 108 aaPredicted RBP11.99□□□□□ -0.49
CCDC188-202ENST00000444532 INAFM2P0DMQ5 153 aa11.99□□□□□ -0.49
CCDC188-202ENST00000444532 RAB5AP20339 215 aa11.99□□□□□ -0.49
CCDC188-202ENST00000444532 TRAV9-1A0A075B6T8 112 aa11.98□□□□□ -0.49
CCDC188-202ENST00000444532 S100PP25815 95 aa11.98□□□□□ -0.49
CCDC188-202ENST00000444532 RPL39P62891 51 aaKnown RBP11.98□□□□□ -0.49
CCDC188-202ENST00000444532 LINC00528Q8N1L1 170 aa11.98□□□□□ -0.49
CCDC188-202ENST00000444532 MAP1LC3AQ9H492 121 aa11.98□□□□□ -0.49
CCDC188-202ENST00000444532 SPANXA1Q9NS26 97 aa11.98□□□□□ -0.49
CCDC188-202ENST00000444532 IGHV1-58A0A0C4DH39 117 aa11.97□□□□□ -0.49
CCDC188-202ENST00000444532 PLA2G1BP04054 148 aaKnown RBP11.97□□□□□ -0.49
CCDC188-202ENST00000444532 HIGD2BQ4VC39 106 aa11.97□□□□□ -0.49
CCDC188-202ENST00000444532 Q6ZUT4 128 aa11.97□□□□□ -0.49
CCDC188-202ENST00000444532 FAT1Q14517 4588 aa11.96□□□□□ -0.49
CCDC188-202ENST00000444532 RNASE13Q5GAN3 156 aaKnown RBP11.96□□□□□ -0.49
CCDC188-202ENST00000444532 TRAV13-1A0A0B4J241 112 aa11.95□□□□□ -0.5
CCDC188-202ENST00000444532 MRPS36P82909 103 aaKnown RBP11.95□□□□□ -0.5
CCDC188-202ENST00000444532 LOC389332A0A1B0GUA5 103 aa11.94□□□□□ -0.5
CCDC188-202ENST00000444532 Q8N8P6 123 aa11.94□□□□□ -0.5
CCDC188-202ENST00000444532 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.94□□□□□ -0.5
CCDC188-202ENST00000444532 VPS13BQ7Z7G8 4022 aa11.94□□□□□ -0.5
CCDC188-202ENST00000444532 COX7A2LO14548 114 aa11.93□□□□□ -0.5
CCDC188-202ENST00000444532 CIRBPQ14011 172 aaKnown RBP11.93□□□□□ -0.5
CCDC188-202ENST00000444532 FAM104AQ969W3 186 aa11.93□□□□□ -0.5
CCDC188-202ENST00000444532 K7EMI3 77 aa11.92□□□□□ -0.5
CCDC188-202ENST00000444532 PYGO1Q9Y3Y4 419 aa11.92□□□□□ -0.5
CCDC188-202ENST00000444532 TGIF2-C20orf24A0A0A6YYL0 155 aa11.91□□□□□ -0.5
CCDC188-202ENST00000444532 PANO1I0J062 215 aa11.91□□□□□ -0.5
CCDC188-202ENST00000444532 ZNF561-AS1K7EIQ3 104 aa11.91□□□□□ -0.5
CCDC188-202ENST00000444532 MALP21145 153 aa11.91□□□□□ -0.5
CCDC188-202ENST00000444532 IFI27P40305 119 aaPredicted RBP11.91□□□□□ -0.5
CCDC188-202ENST00000444532 OPRPNQ99935 248 aaPredicted RBP11.91□□□□□ -0.5
CCDC188-202ENST00000444532 GNB1LQ9BYB4 327 aa11.91□□□□□ -0.5
CCDC188-202ENST00000444532 ORMDL2Q53FV1 153 aa11.9□□□□□ -0.5
CCDC188-202ENST00000444532 NXT2Q9NPJ8 142 aaKnown RBP11.9□□□□□ -0.5
CCDC188-202ENST00000444532 COX6A2Q02221 97 aa11.89□□□□□ -0.51
CCDC188-202ENST00000444532 KIAA1644Q3SXP7 199 aa11.89□□□□□ -0.51
CCDC188-202ENST00000444532 DPH3Q96FX2 82 aa11.89□□□□□ -0.51
CCDC188-202ENST00000444532 APOMO95445 188 aa11.88□□□□□ -0.51
CCDC188-202ENST00000444532 COX19Q49B96 90 aa11.88□□□□□ -0.51
CCDC188-202ENST00000444532 LINC00526Q96FQ7 95 aa11.88□□□□□ -0.51
CCDC188-202ENST00000444532 YPEL4Q96NS1 127 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms