RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.1□□□□□ -0.31
UBE2D4-205ENST00000443780 C7orf77A4D0Y5 90 aa13.1□□□□□ -0.31
UBE2D4-205ENST00000443780 MRPL52Q86TS9 123 aaKnown RBP13.1□□□□□ -0.31
UBE2D4-205ENST00000443780 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.1□□□□□ -0.31
UBE2D4-205ENST00000443780 FCER1GP30273 86 aa13.09□□□□□ -0.31
UBE2D4-205ENST00000443780 LINC00959A0A1B0GUT2 108 aa13.08□□□□□ -0.32
UBE2D4-205ENST00000443780 LINC00862A6NCI5 91 aa13.08□□□□□ -0.32
UBE2D4-205ENST00000443780 PANO1I0J062 215 aa13.08□□□□□ -0.32
UBE2D4-205ENST00000443780 PPP1R2P9O14990 202 aa13.08□□□□□ -0.32
UBE2D4-205ENST00000443780 CDC42SE2Q9NRR3 84 aa13.08□□□□□ -0.32
UBE2D4-205ENST00000443780 IGHV3-64A0A075B6Q5 118 aa13.07□□□□□ -0.32
UBE2D4-205ENST00000443780 KRTAP10-4P60372 401 aaPredicted RBP13.07□□□□□ -0.32
UBE2D4-205ENST00000443780 FOXI1Q12951 378 aa13.07□□□□□ -0.32
UBE2D4-205ENST00000443780 MRPL54Q6P161 138 aaKnown RBP13.07□□□□□ -0.32
UBE2D4-205ENST00000443780 ZNF664Q8N3J9 261 aa13.07□□□□□ -0.32
UBE2D4-205ENST00000443780 KIR2DL4Q99706 377 aa13.07□□□□□ -0.32
UBE2D4-205ENST00000443780 S100A8P05109 93 aa13.06□□□□□ -0.32
UBE2D4-205ENST00000443780 CKS2P33552 79 aa13.06□□□□□ -0.32
UBE2D4-205ENST00000443780 XCL1P47992 114 aa13.06□□□□□ -0.32
UBE2D4-205ENST00000443780 HBBP68871 147 aa13.06□□□□□ -0.32
UBE2D4-205ENST00000443780 HIGD2BQ4VC39 106 aa13.06□□□□□ -0.32
UBE2D4-205ENST00000443780 C20orf78Q9BR46 151 aa13.06□□□□□ -0.32
UBE2D4-205ENST00000443780 TRBV24-1A0A075B6N3 115 aa13.05□□□□□ -0.32
UBE2D4-205ENST00000443780 A0A1B0GXF2 115 aa13.05□□□□□ -0.32
UBE2D4-205ENST00000443780 CCL25O15444 150 aa13.05□□□□□ -0.32
UBE2D4-205ENST00000443780 GVQW2A0A096LPI5 108 aaPredicted RBP13.04□□□□□ -0.32
UBE2D4-205ENST00000443780 F8W036 122 aa13.04□□□□□ -0.32
UBE2D4-205ENST00000443780 RAB14P61106 215 aa13.04□□□□□ -0.32
UBE2D4-205ENST00000443780 CIRBPQ14011 172 aaKnown RBP13.04□□□□□ -0.32
UBE2D4-205ENST00000443780 SS18Q15532 418 aa13.04□□□□□ -0.32
UBE2D4-205ENST00000443780 TNFRSF6BO95407 300 aa13.03□□□□□ -0.32
UBE2D4-205ENST00000443780 RPL32P62910 135 aaKnown RBP13.03□□□□□ -0.32
UBE2D4-205ENST00000443780 SMAGPQ0VAQ4 97 aa13.03□□□□□ -0.32
UBE2D4-205ENST00000443780 UBE2D4Q9Y2X8 147 aa13.03□□□□□ -0.32
UBE2D4-205ENST00000443780 CSDC2Q9Y534 153 aaKnown RBP13.03□□□□□ -0.32
UBE2D4-205ENST00000443780 HERC1Q15751 4861 aa13.02□□□□□ -0.32
UBE2D4-205ENST00000443780 D6R8Y8 96 aa13.02□□□□□ -0.33
UBE2D4-205ENST00000443780 CD164L2Q6UWJ8 174 aa13.01□□□□□ -0.33
UBE2D4-205ENST00000443780 CHTF8P0CG12 524 aa13□□□□□ -0.33
UBE2D4-205ENST00000443780 PNRC1Q12796 327 aaPredicted RBP13□□□□□ -0.33
UBE2D4-205ENST00000443780 ATP5L2Q7Z4Y8 100 aa13□□□□□ -0.33
UBE2D4-205ENST00000443780 SMIM2Q9BVW6 85 aa13□□□□□ -0.33
UBE2D4-205ENST00000443780 IGHV1-58A0A0C4DH39 117 aa12.99□□□□□ -0.33
UBE2D4-205ENST00000443780 TCAPO15273 167 aa12.99□□□□□ -0.33
UBE2D4-205ENST00000443780 NPYP01303 97 aa12.99□□□□□ -0.33
UBE2D4-205ENST00000443780 PPBPP02775 128 aa12.99□□□□□ -0.33
UBE2D4-205ENST00000443780 RPL37AP61513 92 aaKnown RBP12.99□□□□□ -0.33
UBE2D4-205ENST00000443780 TMEM18Q96B42 140 aa12.99□□□□□ -0.33
UBE2D4-205ENST00000443780 DPH3Q96FX2 82 aa12.99□□□□□ -0.33
UBE2D4-205ENST00000443780 TIMM21Q9BVV7 248 aa12.99□□□□□ -0.33
UBE2D4-205ENST00000443780 C1orf196B1AJZ1 125 aa12.98□□□□□ -0.33
UBE2D4-205ENST00000443780 PHOX2AO14813 284 aa12.98□□□□□ -0.33
UBE2D4-205ENST00000443780 COX6A2Q02221 97 aa12.98□□□□□ -0.33
UBE2D4-205ENST00000443780 RNASE13Q5GAN3 156 aaKnown RBP12.98□□□□□ -0.33
UBE2D4-205ENST00000443780 SPACA4Q8TDM5 124 aa12.98□□□□□ -0.33
UBE2D4-205ENST00000443780 A0A087WYN8 130 aa12.97□□□□□ -0.33
UBE2D4-205ENST00000443780 PRSS3P2Q8NHM4 247 aa12.97□□□□□ -0.33
UBE2D4-205ENST00000443780 ANAPC16Q96DE5 110 aa12.97□□□□□ -0.33
UBE2D4-205ENST00000443780 KRTAP29-1A8MX34 341 aaPredicted RBP12.96□□□□□ -0.33
UBE2D4-205ENST00000443780 J3QL48 77 aa12.96□□□□□ -0.33
UBE2D4-205ENST00000443780 MT-ND4LP03901 98 aa12.96□□□□□ -0.33
UBE2D4-205ENST00000443780 CLLU1Q5K131 121 aa12.96□□□□□ -0.33
UBE2D4-205ENST00000443780 Q6ZUT4 128 aa12.96□□□□□ -0.33
UBE2D4-205ENST00000443780 ORMDL3Q8N138 153 aa12.96□□□□□ -0.33
UBE2D4-205ENST00000443780 LINC00526Q96FQ7 95 aa12.96□□□□□ -0.33
UBE2D4-205ENST00000443780 RPL39P62891 51 aaKnown RBP12.95□□□□□ -0.34
UBE2D4-205ENST00000443780 TMEM136Q6ZRR5 245 aa12.95□□□□□ -0.34
UBE2D4-205ENST00000443780 TRAV13-1A0A0B4J241 112 aa12.94□□□□□ -0.34
UBE2D4-205ENST00000443780 PRELID3AQ96N28 172 aa12.94□□□□□ -0.34
UBE2D4-205ENST00000443780 PKHD1L1Q86WI1 4243 aa12.94□□□□□ -0.34
UBE2D4-205ENST00000443780 ZNF561-AS1K7EIQ3 104 aa12.93□□□□□ -0.34
UBE2D4-205ENST00000443780 PLAC8Q9NZF1 115 aa12.93□□□□□ -0.34
UBE2D4-205ENST00000443780 IGKV2-24A0A0C4DH68 120 aa12.92□□□□□ -0.34
UBE2D4-205ENST00000443780 COX7A2LO14548 114 aa12.92□□□□□ -0.34
UBE2D4-205ENST00000443780 MALP21145 153 aa12.92□□□□□ -0.34
UBE2D4-205ENST00000443780 FAM104AQ969W3 186 aa12.92□□□□□ -0.34
UBE2D4-205ENST00000443780 CARD19Q96LW7 228 aa12.92□□□□□ -0.34
UBE2D4-205ENST00000443780 SPANXA1Q9NS26 97 aa12.92□□□□□ -0.34
UBE2D4-205ENST00000443780 MAJINQ3KP22 176 aa12.91□□□□□ -0.34
UBE2D4-205ENST00000443780 A0A096LNI7 61 aa12.9□□□□□ -0.34
UBE2D4-205ENST00000443780 HNRNPA3P51991 378 aaKnown RBP12.9□□□□□ -0.34
UBE2D4-205ENST00000443780 SYCNQ0VAF6 134 aa12.9□□□□□ -0.34
UBE2D4-205ENST00000443780 OPRPNQ99935 248 aaPredicted RBP12.9□□□□□ -0.34
UBE2D4-205ENST00000443780 LRP1Q07954 4544 aaKnown RBP12.89□□□□□ -0.35
UBE2D4-205ENST00000443780 RAB5AP20339 215 aa12.89□□□□□ -0.35
UBE2D4-205ENST00000443780 MRPS36P82909 103 aaKnown RBP12.89□□□□□ -0.35
UBE2D4-205ENST00000443780 IFITM2Q01629 132 aa12.89□□□□□ -0.35
UBE2D4-205ENST00000443780 C5orf38Q86SI9 138 aa12.89□□□□□ -0.35
UBE2D4-205ENST00000443780 PKIGQ9Y2B9 76 aa12.89□□□□□ -0.35
UBE2D4-205ENST00000443780 IGLV4-69A0A075B6H9 119 aa12.88□□□□□ -0.35
UBE2D4-205ENST00000443780 PRSS47A8MTI9 375 aa12.88□□□□□ -0.35
UBE2D4-205ENST00000443780 LAMTOR2Q9Y2Q5 125 aa12.88□□□□□ -0.35
UBE2D4-205ENST00000443780 OXTP01178 125 aa12.87□□□□□ -0.35
UBE2D4-205ENST00000443780 STPG4Q8N801 248 aa12.87□□□□□ -0.35
UBE2D4-205ENST00000443780 LOC389332A0A1B0GUA5 103 aa12.86□□□□□ -0.35
UBE2D4-205ENST00000443780 UQCC3Q6UW78 93 aa12.86□□□□□ -0.35
UBE2D4-205ENST00000443780 MAP1LC3AQ9H492 121 aa12.86□□□□□ -0.35
UBE2D4-205ENST00000443780 FAT3Q8TDW7 4589 aa12.86□□□□□ -0.35
UBE2D4-205ENST00000443780 APOMO95445 188 aa12.85□□□□□ -0.35
UBE2D4-205ENST00000443780 ADCYAP1P18509 176 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms