RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 C9orf85Q96MD7 179 aa5.87□□□□□ -1.47
CCDC39-201ENST00000442201 HBDP02042 147 aa5.87□□□□□ -1.47
CCDC39-201ENST00000442201 C1orf158Q8N1D5 194 aa5.87□□□□□ -1.47
CCDC39-201ENST00000442201 DKK2Q9UBU2 259 aa5.87□□□□□ -1.47
CCDC39-201ENST00000442201 IGHV3OR16-12A0A075B7B8 117 aa5.87□□□□□ -1.47
CCDC39-201ENST00000442201 NXPH4O95158 308 aa5.87□□□□□ -1.47
CCDC39-201ENST00000442201 TCL1BO95988 128 aa5.87□□□□□ -1.47
CCDC39-201ENST00000442201 C4orf26Q17RF5 130 aa5.87□□□□□ -1.47
CCDC39-201ENST00000442201 OXLD1Q5BKU9 147 aa5.87□□□□□ -1.47
CCDC39-201ENST00000442201 ZC2HC1BQ5TFG8 222 aa5.87□□□□□ -1.47
CCDC39-201ENST00000442201 TTTY13Q9BZ97 58 aa5.87□□□□□ -1.47
CCDC39-201ENST00000442201 TINCRA0A1B0GVN0 87 aa5.86□□□□□ -1.47
CCDC39-201ENST00000442201 GIG44P09565 113 aaPredicted RBP5.86□□□□□ -1.47
CCDC39-201ENST00000442201 ZNF415Q09FC8 603 aa5.86□□□□□ -1.47
CCDC39-201ENST00000442201 MRPL51Q4U2R6 128 aaKnown RBP5.86□□□□□ -1.47
CCDC39-201ENST00000442201 ZFP2Q6ZN57 461 aa5.86□□□□□ -1.47
CCDC39-201ENST00000442201 ORMDL3Q8N138 153 aa5.86□□□□□ -1.47
CCDC39-201ENST00000442201 DPH3Q96FX2 82 aa5.86□□□□□ -1.47
CCDC39-201ENST00000442201 OXTP01178 125 aa5.86□□□□□ -1.47
CCDC39-201ENST00000442201 CKS2P33552 79 aa5.86□□□□□ -1.47
CCDC39-201ENST00000442201 C10orf126Q8N4M7 172 aa5.86□□□□□ -1.47
CCDC39-201ENST00000442201 MAPKAPK5-AS1Q8N8E1 139 aa5.86□□□□□ -1.47
CCDC39-201ENST00000442201 D6R8Y8 96 aa5.85□□□□□ -1.47
CCDC39-201ENST00000442201 PRM2P04554 102 aa5.85□□□□□ -1.47
CCDC39-201ENST00000442201 IFI27P40305 119 aaPredicted RBP5.85□□□□□ -1.47
CCDC39-201ENST00000442201 ZNF876PQ49A33 203 aa5.85□□□□□ -1.47
CCDC39-201ENST00000442201 C14orf178Q8N769 122 aaPredicted RBP5.85□□□□□ -1.47
CCDC39-201ENST00000442201 PRSS3P2Q8NHM4 247 aa5.85□□□□□ -1.47
CCDC39-201ENST00000442201 RNF185Q96GF1 192 aa5.85□□□□□ -1.47
CCDC39-201ENST00000442201 DPH3P1Q9H4G8 78 aa5.85□□□□□ -1.47
CCDC39-201ENST00000442201 HRCT1Q6UXD1 115 aa5.85□□□□□ -1.47
CCDC39-201ENST00000442201 HIST1H4GQ99525 98 aa5.85□□□□□ -1.47
CCDC39-201ENST00000442201 TRAV8-4A0A0B4J246 113 aa5.84□□□□□ -1.47
CCDC39-201ENST00000442201 IGKCP01834 107 aa5.84□□□□□ -1.47
CCDC39-201ENST00000442201 TMEM258P61165 79 aa5.84□□□□□ -1.47
CCDC39-201ENST00000442201 KLK5Q9Y337 293 aaPredicted RBP5.84□□□□□ -1.47
CCDC39-201ENST00000442201 SLC25A20O43772 301 aa5.84□□□□□ -1.47
CCDC39-201ENST00000442201 DEFB121Q5J5C9 76 aa5.84□□□□□ -1.47
CCDC39-201ENST00000442201 C11orf72Q8NBR9 251 aa5.84□□□□□ -1.47
CCDC39-201ENST00000442201 CSNK1G2-AS1Q8NCQ2 148 aa5.84□□□□□ -1.47
CCDC39-201ENST00000442201 C2orf48Q96LS8 159 aa5.84□□□□□ -1.47
CCDC39-201ENST00000442201 SMKR1H3BMG3 65 aa5.84□□□□□ -1.48
CCDC39-201ENST00000442201 COX7CP15954 63 aa5.84□□□□□ -1.48
CCDC39-201ENST00000442201 MGPP08493 103 aa5.83□□□□□ -1.48
CCDC39-201ENST00000442201 APOC4P55056 127 aa5.83□□□□□ -1.48
CCDC39-201ENST00000442201 EGFEM1PQ0D2K5 195 aa5.83□□□□□ -1.48
CCDC39-201ENST00000442201 TMEM263Q8WUH6 116 aaKnown RBP5.83□□□□□ -1.48
CCDC39-201ENST00000442201 JPT2Q9H910 190 aa5.83□□□□□ -1.48
CCDC39-201ENST00000442201 LINC01549A6NIU2 74 aa5.83□□□□□ -1.48
CCDC39-201ENST00000442201 PIK3CD-AS1Q5SR53 167 aa5.83□□□□□ -1.48
CCDC39-201ENST00000442201 A0A087WWL8 130 aa5.82□□□□□ -1.48
CCDC39-201ENST00000442201 FAM236AA0A1B0GUQ0 79 aa5.82□□□□□ -1.48
CCDC39-201ENST00000442201 FAM236BA0A1B0GV22 79 aa5.82□□□□□ -1.48
CCDC39-201ENST00000442201 PMVKQ15126 192 aa5.82□□□□□ -1.48
CCDC39-201ENST00000442201 MDFIQ99750 246 aa5.82□□□□□ -1.48
CCDC39-201ENST00000442201 KIF25-AS1Q9Y6Z4 181 aa5.82□□□□□ -1.48
CCDC39-201ENST00000442201 DPM2O94777 84 aa5.82□□□□□ -1.48
CCDC39-201ENST00000442201 IGHV4-30-4P0DP06 118 aa5.82□□□□□ -1.48
CCDC39-201ENST00000442201 FAM74A4Q5TZK3 123 aa5.82□□□□□ -1.48
CCDC39-201ENST00000442201 TRAV26-2A0A0B4J265 109 aa5.82□□□□□ -1.48
CCDC39-201ENST00000442201 ATP5LO75964 103 aa5.82□□□□□ -1.48
CCDC39-201ENST00000442201 KRTAP10-11P60412 298 aa5.82□□□□□ -1.48
CCDC39-201ENST00000442201 GAGE2AQ6NT46 116 aa5.82□□□□□ -1.48
CCDC39-201ENST00000442201 C16orf74Q96GX8 76 aa5.82□□□□□ -1.48
CCDC39-201ENST00000442201 V9GYY9 64 aa5.82□□□□□ -1.48
CCDC39-201ENST00000442201 TRRAPQ9Y4A5 3859 aa5.82□□□□□ -1.48
CCDC39-201ENST00000442201 F5H697 171 aa5.81□□□□□ -1.48
CCDC39-201ENST00000442201 GAS8-AS1O95177 125 aa5.81□□□□□ -1.48
CCDC39-201ENST00000442201 GATA1P15976 413 aaPredicted RBP5.81□□□□□ -1.48
CCDC39-201ENST00000442201 LINC00315P59091 139 aa5.81□□□□□ -1.48
CCDC39-201ENST00000442201 LOC389332A0A1B0GUA5 103 aa5.81□□□□□ -1.48
CCDC39-201ENST00000442201 MUC4Q99102 2169 aa5.81□□□□□ -1.48
CCDC39-201ENST00000442201 LOC107984156A0A0G2JMH3 177 aa5.8□□□□□ -1.48
CCDC39-201ENST00000442201 EPM2AB3EWF7 344 aa5.8□□□□□ -1.48
CCDC39-201ENST00000442201 HIST1H4AP62805 103 aaKnown RBP5.8□□□□□ -1.48
CCDC39-201ENST00000442201 ARL17AQ8IVW1 177 aa5.8□□□□□ -1.48
CCDC39-201ENST00000442201 IL17DQ8TAD2 202 aa5.8□□□□□ -1.48
CCDC39-201ENST00000442201 PYGO1Q9Y3Y4 419 aa5.8□□□□□ -1.48
CCDC39-201ENST00000442201 TRGV1A0A0A0MS02 117 aa5.8□□□□□ -1.48
CCDC39-201ENST00000442201 PPP1R17O96001 155 aa5.8□□□□□ -1.48
CCDC39-201ENST00000442201 DAZ2Q13117 558 aaKnown RBP5.8□□□□□ -1.48
CCDC39-201ENST00000442201 ZNF56Q15929 161 aa5.8□□□□□ -1.48
CCDC39-201ENST00000442201 NRACQ8N912 160 aa5.8□□□□□ -1.48
CCDC39-201ENST00000442201 LCE2DQ5TA82 110 aaPredicted RBP5.8□□□□□ -1.48
CCDC39-201ENST00000442201 NTN5Q8WTR8 489 aaPredicted RBP5.8□□□□□ -1.48
CCDC39-201ENST00000442201 P0DMU3 169 aa5.79□□□□□ -1.48
CCDC39-201ENST00000442201 FAM231AP0DMU4 169 aa5.79□□□□□ -1.48
CCDC39-201ENST00000442201 FAM231CP0DMU5 169 aa5.79□□□□□ -1.48
CCDC39-201ENST00000442201 DEFB135Q30KP9 77 aa5.79□□□□□ -1.48
CCDC39-201ENST00000442201 SUMO4Q6EEV6 95 aa5.79□□□□□ -1.48
CCDC39-201ENST00000442201 SDIM1Q6ZPB5 146 aa5.79□□□□□ -1.48
CCDC39-201ENST00000442201 NOP10Q9NPE3 64 aaKnown RBP5.79□□□□□ -1.48
CCDC39-201ENST00000442201 CEMP1Q6PRD7 247 aaPredicted RBP5.79□□□□□ -1.48
CCDC39-201ENST00000442201 NXT2Q9NPJ8 142 aaKnown RBP5.79□□□□□ -1.48
CCDC39-201ENST00000442201 PLAC8L1A1L4L8 177 aa5.79□□□□□ -1.48
CCDC39-201ENST00000442201 Q6ZTI0 123 aa5.79□□□□□ -1.48
CCDC39-201ENST00000442201 A8MZ25 164 aa5.78□□□□□ -1.48
CCDC39-201ENST00000442201 FCER1GP30273 86 aa5.78□□□□□ -1.48
CCDC39-201ENST00000442201 CXCL5P42830 114 aa5.78□□□□□ -1.48
CCDC39-201ENST00000442201 SUMO2P61956 95 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms