RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 MRPL52Q86TS9 123 aaKnown RBP8.88□□□□□ -0.99
LTBR-202ENST00000440421 C9orf163Q8N9P6 203 aa8.88□□□□□ -0.99
LTBR-202ENST00000440421 C20orf78Q9BR46 151 aa8.88□□□□□ -0.99
LTBR-202ENST00000440421 CHAC1Q9BUX1 264 aa8.88□□□□□ -0.99
LTBR-202ENST00000440421 AP5S1Q9NUS5 200 aa8.88□□□□□ -0.99
LTBR-202ENST00000440421 LINC00959A0A1B0GUT2 108 aa8.87□□□□□ -0.99
LTBR-202ENST00000440421 NPYP01303 97 aa8.87□□□□□ -0.99
LTBR-202ENST00000440421 XCL1P47992 114 aa8.87□□□□□ -0.99
LTBR-202ENST00000440421 LINC00528Q8N1L1 170 aa8.87□□□□□ -0.99
LTBR-202ENST00000440421 C15orf56Q8N910 161 aa8.87□□□□□ -0.99
LTBR-202ENST00000440421 ANAPC16Q96DE5 110 aa8.87□□□□□ -0.99
LTBR-202ENST00000440421 CDC42SE2Q9NRR3 84 aa8.87□□□□□ -0.99
LTBR-202ENST00000440421 TRBV24-1A0A075B6N3 115 aa8.86□□□□□ -0.99
LTBR-202ENST00000440421 CCL25O15444 150 aa8.86□□□□□ -0.99
LTBR-202ENST00000440421 SLPIP03973 132 aa8.86□□□□□ -0.99
LTBR-202ENST00000440421 CNBPP62633 177 aaKnown RBP8.86□□□□□ -0.99
LTBR-202ENST00000440421 FOXI1Q12951 378 aa8.86□□□□□ -0.99
LTBR-202ENST00000440421 HIGD2BQ4VC39 106 aa8.86□□□□□ -0.99
LTBR-202ENST00000440421 CFAP161Q6P656 301 aa8.86□□□□□ -0.99
LTBR-202ENST00000440421 ATP5L2Q7Z4Y8 100 aa8.86□□□□□ -0.99
LTBR-202ENST00000440421 ZNF664Q8N3J9 261 aa8.86□□□□□ -0.99
LTBR-202ENST00000440421 CIRBP-AS1Q8TBR5 109 aa8.86□□□□□ -0.99
LTBR-202ENST00000440421 DNAH8Q96JB1 4490 aa8.86□□□□□ -0.99
LTBR-202ENST00000440421 FAT1Q14517 4588 aa8.85□□□□□ -0.99
LTBR-202ENST00000440421 SS18Q15532 418 aa8.85□□□□□ -0.99
LTBR-202ENST00000440421 RNASE13Q5GAN3 156 aaKnown RBP8.85□□□□□ -0.99
LTBR-202ENST00000440421 SMIM2Q9BVW6 85 aa8.85□□□□□ -0.99
LTBR-202ENST00000440421 UBE2D4Q9Y2X8 147 aa8.85□□□□□ -0.99
LTBR-202ENST00000440421 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.84□□□□□ -0.99
LTBR-202ENST00000440421 PPBPP02775 128 aa8.84□□□□□ -0.99
LTBR-202ENST00000440421 ADCYAP1P18509 176 aa8.84□□□□□ -0.99
LTBR-202ENST00000440421 RPL32P62910 135 aaKnown RBP8.84□□□□□ -0.99
LTBR-202ENST00000440421 SDIM1Q6ZPB5 146 aa8.84□□□□□ -0.99
LTBR-202ENST00000440421 ORMDL3Q8N138 153 aa8.84□□□□□ -0.99
LTBR-202ENST00000440421 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.84□□□□□ -0.99
LTBR-202ENST00000440421 TCAPO15273 167 aa8.83□□□□□ -1
LTBR-202ENST00000440421 PLA2G1BP04054 148 aaKnown RBP8.83□□□□□ -1
LTBR-202ENST00000440421 RPL39P62891 51 aaKnown RBP8.83□□□□□ -1
LTBR-202ENST00000440421 SMAGPQ0VAQ4 97 aa8.83□□□□□ -1
LTBR-202ENST00000440421 UQCC3Q6UW78 93 aa8.83□□□□□ -1
LTBR-202ENST00000440421 TMEM136Q6ZRR5 245 aa8.83□□□□□ -1
LTBR-202ENST00000440421 TMEM18Q96B42 140 aa8.83□□□□□ -1
LTBR-202ENST00000440421 PRELID3AQ96N28 172 aa8.83□□□□□ -1
LTBR-202ENST00000440421 CSDC2Q9Y534 153 aaKnown RBP8.83□□□□□ -1
LTBR-202ENST00000440421 IGHV3-64A0A075B6Q5 118 aa8.82□□□□□ -1
LTBR-202ENST00000440421 TMEM218A2RU14 115 aa8.82□□□□□ -1
LTBR-202ENST00000440421 PANO1I0J062 215 aa8.82□□□□□ -1
LTBR-202ENST00000440421 PHOX2AO14813 284 aa8.82□□□□□ -1
LTBR-202ENST00000440421 Q6ZUT4 128 aa8.82□□□□□ -1
LTBR-202ENST00000440421 GVQW2A0A096LPI5 108 aaPredicted RBP8.81□□□□□ -1
LTBR-202ENST00000440421 CD164L2Q6UWJ8 174 aa8.81□□□□□ -1
LTBR-202ENST00000440421 TIMM21Q9BVV7 248 aa8.81□□□□□ -1
LTBR-202ENST00000440421 TRAV13-1A0A0B4J241 112 aa8.8□□□□□ -1
LTBR-202ENST00000440421 LOC389332A0A1B0GUA5 103 aa8.8□□□□□ -1
LTBR-202ENST00000440421 CHTF8P0CG12 524 aa8.8□□□□□ -1
LTBR-202ENST00000440421 COMMD7Q86VX2 200 aa8.8□□□□□ -1
LTBR-202ENST00000440421 LINC00526Q96FQ7 95 aa8.8□□□□□ -1
LTBR-202ENST00000440421 IGHV1-58A0A0C4DH39 117 aa8.79□□□□□ -1
LTBR-202ENST00000440421 C1orf196B1AJZ1 125 aa8.79□□□□□ -1
LTBR-202ENST00000440421 RAB5AP20339 215 aa8.79□□□□□ -1
LTBR-202ENST00000440421 DPH3Q96FX2 82 aa8.79□□□□□ -1
LTBR-202ENST00000440421 OPRPNQ99935 248 aaPredicted RBP8.79□□□□□ -1
LTBR-202ENST00000440421 SRRM2Q9UQ35 2752 aaKnown RBP8.78□□□□□ -1
LTBR-202ENST00000440421 MALP21145 153 aa8.78□□□□□ -1
LTBR-202ENST00000440421 MAP1LC3AQ9H492 121 aa8.78□□□□□ -1
LTBR-202ENST00000440421 SPANXA1Q9NS26 97 aa8.78□□□□□ -1
LTBR-202ENST00000440421 VPS13BQ7Z7G8 4022 aa8.78□□□□□ -1
LTBR-202ENST00000440421 COX7A2LO14548 114 aa8.77□□□□□ -1.01
LTBR-202ENST00000440421 COX6A2Q02221 97 aa8.77□□□□□ -1.01
LTBR-202ENST00000440421 FAM104AQ969W3 186 aa8.77□□□□□ -1.01
LTBR-202ENST00000440421 IMMP2LQ96T52 175 aa8.77□□□□□ -1.01
LTBR-202ENST00000440421 SEC11CQ9BY50 192 aa8.77□□□□□ -1.01
LTBR-202ENST00000440421 CTDSP1Q9GZU7 261 aa8.77□□□□□ -1.01
LTBR-202ENST00000440421 LAMTOR2Q9Y2Q5 125 aa8.77□□□□□ -1.01
LTBR-202ENST00000440421 ZNF561-AS1K7EIQ3 104 aa8.76□□□□□ -1.01
LTBR-202ENST00000440421 C5orf38Q86SI9 138 aa8.76□□□□□ -1.01
LTBR-202ENST00000440421 PRSS3P2Q8NHM4 247 aa8.76□□□□□ -1.01
LTBR-202ENST00000440421 PRSS47A8MTI9 375 aa8.75□□□□□ -1.01
LTBR-202ENST00000440421 IFI27P40305 119 aaPredicted RBP8.75□□□□□ -1.01
LTBR-202ENST00000440421 MRPS36P82909 103 aaKnown RBP8.75□□□□□ -1.01
LTBR-202ENST00000440421 CIRBPQ14011 172 aaKnown RBP8.75□□□□□ -1.01
LTBR-202ENST00000440421 SPACA4Q8TDM5 124 aa8.75□□□□□ -1.01
LTBR-202ENST00000440421 CARD19Q96LW7 228 aa8.75□□□□□ -1.01
LTBR-202ENST00000440421 A0A087WYN8 130 aa8.74□□□□□ -1.01
LTBR-202ENST00000440421 IGKV2-24A0A0C4DH68 120 aa8.74□□□□□ -1.01
LTBR-202ENST00000440421 IFITM10A6NMD0 228 aa8.74□□□□□ -1.01
LTBR-202ENST00000440421 KRTAP10-4P60372 401 aaPredicted RBP8.74□□□□□ -1.01
LTBR-202ENST00000440421 RPL37AP61513 92 aaKnown RBP8.74□□□□□ -1.01
LTBR-202ENST00000440421 Q8N8P6 123 aa8.74□□□□□ -1.01
LTBR-202ENST00000440421 FLG2Q5D862 2391 aaPredicted RBP8.74□□□□□ -1.01
LTBR-202ENST00000440421 IGLV4-69A0A075B6H9 119 aa8.73□□□□□ -1.01
LTBR-202ENST00000440421 S100PP25815 95 aa8.73□□□□□ -1.01
LTBR-202ENST00000440421 SYCNQ0VAF6 134 aa8.73□□□□□ -1.01
LTBR-202ENST00000440421 MAJINQ3KP22 176 aa8.73□□□□□ -1.01
LTBR-202ENST00000440421 KIAA1644Q3SXP7 199 aa8.73□□□□□ -1.01
LTBR-202ENST00000440421 IGLV4-3A0A075B6K6 122 aa8.72□□□□□ -1.01
LTBR-202ENST00000440421 TRAV9-1A0A075B6T8 112 aa8.72□□□□□ -1.01
LTBR-202ENST00000440421 A0A096LNI7 61 aa8.72□□□□□ -1.01
LTBR-202ENST00000440421 APOMO95445 188 aa8.71□□□□□ -1.02
LTBR-202ENST00000440421 C2orf66Q6UXQ4 117 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms