RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 CHCHD7Q9BUK0 85 aa10.21□□□□□ -0.77
TNFRSF1A-204ENST00000440083 PYGO1Q9Y3Y4 419 aa10.21□□□□□ -0.77
TNFRSF1A-204ENST00000440083 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF1A-204ENST00000440083 TEX48A0A1B0GUV7 120 aa10.2□□□□□ -0.78
TNFRSF1A-204ENST00000440083 IGKV2-29A2NJV5 120 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF1A-204ENST00000440083 TCTAP57738 103 aa10.2□□□□□ -0.78
TNFRSF1A-204ENST00000440083 MRPL52Q86TS9 123 aaKnown RBP10.2□□□□□ -0.78
TNFRSF1A-204ENST00000440083 VCX2Q9H322 139 aa10.2□□□□□ -0.78
TNFRSF1A-204ENST00000440083 CST9LQ9H4G1 147 aa10.2□□□□□ -0.78
TNFRSF1A-204ENST00000440083 IGLV4-3A0A075B6K6 122 aa10.19□□□□□ -0.78
TNFRSF1A-204ENST00000440083 NUPR2A6NF83 97 aa10.19□□□□□ -0.78
TNFRSF1A-204ENST00000440083 M0R143 59 aa10.19□□□□□ -0.78
TNFRSF1A-204ENST00000440083 HHLA3Q9XRX5 114 aa10.19□□□□□ -0.78
TNFRSF1A-204ENST00000440083 LOC100131303A0A0U1RQF7 123 aa10.18□□□□□ -0.78
TNFRSF1A-204ENST00000440083 HTN3P15516 51 aa10.18□□□□□ -0.78
TNFRSF1A-204ENST00000440083 CRYBA4P53673 196 aa10.18□□□□□ -0.78
TNFRSF1A-204ENST00000440083 HERVK_113P61574 105 aa10.18□□□□□ -0.78
TNFRSF1A-204ENST00000440083 CTAG1AP78358 180 aa10.18□□□□□ -0.78
TNFRSF1A-204ENST00000440083 TMEM97Q5BJF2 176 aa10.18□□□□□ -0.78
TNFRSF1A-204ENST00000440083 DGAT2L7PQ6IED9 249 aa10.18□□□□□ -0.78
TNFRSF1A-204ENST00000440083 LYSTQ99698 3801 aa10.17□□□□□ -0.78
TNFRSF1A-204ENST00000440083 TRAV10A0A0B4J240 114 aa10.17□□□□□ -0.78
TNFRSF1A-204ENST00000440083 UBE2L6O14933 153 aa10.17□□□□□ -0.78
TNFRSF1A-204ENST00000440083 C2orf88Q9BSF0 95 aa10.17□□□□□ -0.78
TNFRSF1A-204ENST00000440083 TMEM243Q9BU79 118 aa10.17□□□□□ -0.78
TNFRSF1A-204ENST00000440083 GTSF1LQ9H1H1 148 aa10.17□□□□□ -0.78
TNFRSF1A-204ENST00000440083 PRO0255Q9UI72 69 aa10.17□□□□□ -0.78
TNFRSF1A-204ENST00000440083 UBE2D4Q9Y2X8 147 aa10.17□□□□□ -0.78
TNFRSF1A-204ENST00000440083 MRPS16Q9Y3D3 137 aaKnown RBP10.17□□□□□ -0.78
TNFRSF1A-204ENST00000440083 IGLV4-69A0A075B6H9 119 aa10.16□□□□□ -0.78
TNFRSF1A-204ENST00000440083 TRBV25-1A0A075B6N4 114 aa10.16□□□□□ -0.78
TNFRSF1A-204ENST00000440083 DEFB131BA0A096LNP1 70 aa10.16□□□□□ -0.78
TNFRSF1A-204ENST00000440083 OPRPNQ99935 248 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF1A-204ENST00000440083 TIMM21Q9BVV7 248 aa10.16□□□□□ -0.78
TNFRSF1A-204ENST00000440083 VPS13DQ5THJ4 4388 aa10.16□□□□□ -0.78
TNFRSF1A-204ENST00000440083 C11orf86A6NJI1 115 aa10.15□□□□□ -0.78
TNFRSF1A-204ENST00000440083 ATP5G1P05496 136 aa10.15□□□□□ -0.78
TNFRSF1A-204ENST00000440083 GYPEP15421 78 aa10.15□□□□□ -0.78
TNFRSF1A-204ENST00000440083 Q6ZUT4 128 aa10.15□□□□□ -0.78
TNFRSF1A-204ENST00000440083 CHAC1Q9BUX1 264 aa10.15□□□□□ -0.78
TNFRSF1A-204ENST00000440083 KLK5Q9Y337 293 aaPredicted RBP10.15□□□□□ -0.78
TNFRSF1A-204ENST00000440083 RYR2Q92736 4967 aa10.14□□□□□ -0.79
TNFRSF1A-204ENST00000440083 IGLL5B9A064 214 aa10.14□□□□□ -0.79
TNFRSF1A-204ENST00000440083 EREGO14944 169 aa10.14□□□□□ -0.79
TNFRSF1A-204ENST00000440083 DLEU1O43261 78 aa10.14□□□□□ -0.79
TNFRSF1A-204ENST00000440083 PAX4O43316 350 aa10.14□□□□□ -0.79
TNFRSF1A-204ENST00000440083 LINC00694P0DN24 101 aa10.14□□□□□ -0.79
TNFRSF1A-204ENST00000440083 MRPS36P82909 103 aaKnown RBP10.14□□□□□ -0.79
TNFRSF1A-204ENST00000440083 BATFQ16520 125 aa10.14□□□□□ -0.79
TNFRSF1A-204ENST00000440083 TMEM170BQ5T4T1 132 aa10.14□□□□□ -0.79
TNFRSF1A-204ENST00000440083 AMMECR1LQ6DCA0 310 aa10.14□□□□□ -0.79
TNFRSF1A-204ENST00000440083 BOD1L2Q8IYS8 172 aa10.14□□□□□ -0.79
TNFRSF1A-204ENST00000440083 TMEM101Q96IK0 257 aa10.14□□□□□ -0.79
TNFRSF1A-204ENST00000440083 TP73-AS1Q9UF72 201 aa10.14□□□□□ -0.79
TNFRSF1A-204ENST00000440083 H7C423 109 aa10.13□□□□□ -0.79
TNFRSF1A-204ENST00000440083 FGF6P10767 208 aa10.13□□□□□ -0.79
TNFRSF1A-204ENST00000440083 LBHQ53QV2 105 aaPredicted RBP10.13□□□□□ -0.79
TNFRSF1A-204ENST00000440083 NTM-AS1Q6ZSK4 140 aa10.13□□□□□ -0.79
TNFRSF1A-204ENST00000440083 NFE4Q86UQ8 179 aa10.13□□□□□ -0.79
TNFRSF1A-204ENST00000440083 AMELXQ99217 191 aa10.13□□□□□ -0.79
TNFRSF1A-204ENST00000440083 SNHG12Q9BXW3 62 aa10.13□□□□□ -0.79
TNFRSF1A-204ENST00000440083 RYR3Q15413 4870 aa10.12□□□□□ -0.79
TNFRSF1A-204ENST00000440083 IGKV2D-26A0A0A0MRZ7 120 aa10.12□□□□□ -0.79
TNFRSF1A-204ENST00000440083 E9PLD3 99 aa10.12□□□□□ -0.79
TNFRSF1A-204ENST00000440083 F5H768 121 aa10.12□□□□□ -0.79
TNFRSF1A-204ENST00000440083 PCP2Q8IVA1 136 aa10.12□□□□□ -0.79
TNFRSF1A-204ENST00000440083 OR5A1Q8NGJ0 315 aa10.12□□□□□ -0.79
TNFRSF1A-204ENST00000440083 ATP6V0E2Q8NHE4 81 aa10.12□□□□□ -0.79
TNFRSF1A-204ENST00000440083 TRAV8-6A0A0B4J262 113 aa10.11□□□□□ -0.79
TNFRSF1A-204ENST00000440083 RNASE13Q5GAN3 156 aaKnown RBP10.11□□□□□ -0.79
TNFRSF1A-204ENST00000440083 TRBV6-8A0A0A6YYG3 113 aa10.1□□□□□ -0.79
TNFRSF1A-204ENST00000440083 A0A0J9YXV3 536 aa10.1□□□□□ -0.79
TNFRSF1A-204ENST00000440083 LCE6AA0A183 80 aa10.1□□□□□ -0.79
TNFRSF1A-204ENST00000440083 SIVA1O15304 175 aa10.1□□□□□ -0.79
TNFRSF1A-204ENST00000440083 CHCHD5Q9BSY4 110 aa10.1□□□□□ -0.79
TNFRSF1A-204ENST00000440083 APLNQ9ULZ1 77 aa10.1□□□□□ -0.79
TNFRSF1A-204ENST00000440083 CSDC2Q9Y534 153 aaKnown RBP10.1□□□□□ -0.79
TNFRSF1A-204ENST00000440083 A0A0J9YY99 117 aa10.09□□□□□ -0.79
TNFRSF1A-204ENST00000440083 ZNF25P17030 456 aaPredicted RBP10.09□□□□□ -0.79
TNFRSF1A-204ENST00000440083 HINT1P49773 126 aaPredicted RBP10.09□□□□□ -0.79
TNFRSF1A-204ENST00000440083 C2orf91Q6ZV80 131 aa10.09□□□□□ -0.79
TNFRSF1A-204ENST00000440083 TINCRA0A1B0GVN0 87 aa10.08□□□□□ -0.8
TNFRSF1A-204ENST00000440083 ZNF22P17026 224 aaPredicted RBP10.08□□□□□ -0.8
TNFRSF1A-204ENST00000440083 GAGE6Q13070 117 aa10.08□□□□□ -0.8
TNFRSF1A-204ENST00000440083 GEMIN7Q9H840 131 aaKnown RBP10.08□□□□□ -0.8
TNFRSF1A-204ENST00000440083 TRAV26-1A0A087WT03 109 aa10.07□□□□□ -0.8
TNFRSF1A-204ENST00000440083 SEC11AP67812 179 aa10.07□□□□□ -0.8
TNFRSF1A-204ENST00000440083 HSD52Q0P140 79 aa10.07□□□□□ -0.8
TNFRSF1A-204ENST00000440083 SH2D6Q7Z4S9 175 aa10.07□□□□□ -0.8
TNFRSF1A-204ENST00000440083 LINC00476Q8WZB0 136 aa10.07□□□□□ -0.8
TNFRSF1A-204ENST00000440083 FAM104AQ969W3 186 aa10.07□□□□□ -0.8
TNFRSF1A-204ENST00000440083 TTTY13Q9BZ97 58 aa10.07□□□□□ -0.8
TNFRSF1A-204ENST00000440083 ICOSQ9Y6W8 199 aa10.07□□□□□ -0.8
TNFRSF1A-204ENST00000440083 HYDINQ4G0P3 5121 aa10.07□□□□□ -0.8
TNFRSF1A-204ENST00000440083 MYMXA0A1B0GTQ4 84 aa10.06□□□□□ -0.8
TNFRSF1A-204ENST00000440083 TMEM223A0PJW6 202 aa10.06□□□□□ -0.8
TNFRSF1A-204ENST00000440083 LGALS3P17931 250 aaKnown RBP10.06□□□□□ -0.8
TNFRSF1A-204ENST00000440083 UBE2D1P51668 147 aa10.06□□□□□ -0.8
TNFRSF1A-204ENST00000440083 COL5A1-AS1Q5SY13 56 aa10.06□□□□□ -0.8
TNFRSF1A-204ENST00000440083 VSIG2Q96IQ7 327 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms