RNA–Protein interactions for RNA: ENST00000439338.5

UBE2F-212, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 873 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-212ENST00000439338 C20orf78Q9BR46 151 aa13.28□□□□□ -0.28
UBE2F-212ENST00000439338 TRBV24-1A0A075B6N3 115 aa13.27□□□□□ -0.29
UBE2F-212ENST00000439338 hDV102S1A0JD36 115 aa13.27□□□□□ -0.29
UBE2F-212ENST00000439338 TNFRSF6BO95407 300 aa13.27□□□□□ -0.29
UBE2F-212ENST00000439338 DGAT2L7PQ6IED9 249 aa13.27□□□□□ -0.29
UBE2F-212ENST00000439338 SCXQ7RTU7 201 aa13.26□□□□□ -0.29
UBE2F-212ENST00000439338 FAM229AH3BQW9 127 aa13.25□□□□□ -0.29
UBE2F-212ENST00000439338 NPYP01303 97 aa13.25□□□□□ -0.29
UBE2F-212ENST00000439338 ADCYAP1P18509 176 aa13.25□□□□□ -0.29
UBE2F-212ENST00000439338 RPL32P62910 135 aaKnown RBP13.25□□□□□ -0.29
UBE2F-212ENST00000439338 UQCC3Q6UW78 93 aa13.25□□□□□ -0.29
UBE2F-212ENST00000439338 C15orf56Q8N910 161 aa13.25□□□□□ -0.29
UBE2F-212ENST00000439338 C9orf163Q8N9P6 203 aa13.25□□□□□ -0.29
UBE2F-212ENST00000439338 CDC42SE2Q9NRR3 84 aa13.25□□□□□ -0.29
UBE2F-212ENST00000439338 LINC00959A0A1B0GUT2 108 aa13.24□□□□□ -0.29
UBE2F-212ENST00000439338 SMIM2Q9BVW6 85 aa13.24□□□□□ -0.29
UBE2F-212ENST00000439338 PPBPP02775 128 aa13.23□□□□□ -0.29
UBE2F-212ENST00000439338 CNBPP62633 177 aaKnown RBP13.23□□□□□ -0.29
UBE2F-212ENST00000439338 FOXI1Q12951 378 aa13.23□□□□□ -0.29
UBE2F-212ENST00000439338 CFAP161Q6P656 301 aa13.23□□□□□ -0.29
UBE2F-212ENST00000439338 ZNF664Q8N3J9 261 aa13.23□□□□□ -0.29
UBE2F-212ENST00000439338 CHAC1Q9BUX1 264 aa13.23□□□□□ -0.29
UBE2F-212ENST00000439338 AP5S1Q9NUS5 200 aa13.23□□□□□ -0.29
UBE2F-212ENST00000439338 UBE2D4Q9Y2X8 147 aa13.23□□□□□ -0.29
UBE2F-212ENST00000439338 TMEM218A2RU14 115 aa13.22□□□□□ -0.29
UBE2F-212ENST00000439338 PHOX2AO14813 284 aa13.22□□□□□ -0.29
UBE2F-212ENST00000439338 CCL25O15444 150 aa13.22□□□□□ -0.29
UBE2F-212ENST00000439338 XCL1P47992 114 aa13.22□□□□□ -0.29
UBE2F-212ENST00000439338 ORMDL3Q8N138 153 aa13.22□□□□□ -0.29
UBE2F-212ENST00000439338 SLPIP03973 132 aa13.21□□□□□ -0.29
UBE2F-212ENST00000439338 INAFM2P0DMQ5 153 aa13.21□□□□□ -0.29
UBE2F-212ENST00000439338 SMAGPQ0VAQ4 97 aa13.21□□□□□ -0.29
UBE2F-212ENST00000439338 HIGD2BQ4VC39 106 aa13.21□□□□□ -0.29
UBE2F-212ENST00000439338 TMEM136Q6ZRR5 245 aa13.21□□□□□ -0.29
UBE2F-212ENST00000439338 LINC00528Q8N1L1 170 aa13.21□□□□□ -0.29
UBE2F-212ENST00000439338 CIRBP-AS1Q8TBR5 109 aa13.21□□□□□ -0.29
UBE2F-212ENST00000439338 TCAPO15273 167 aa13.2□□□□□ -0.3
UBE2F-212ENST00000439338 SS18Q15532 418 aa13.2□□□□□ -0.3
UBE2F-212ENST00000439338 RNASE13Q5GAN3 156 aaKnown RBP13.2□□□□□ -0.3
UBE2F-212ENST00000439338 COMMD7Q86VX2 200 aa13.2□□□□□ -0.3
UBE2F-212ENST00000439338 TMEM18Q96B42 140 aa13.2□□□□□ -0.3
UBE2F-212ENST00000439338 PRELID3AQ96N28 172 aa13.2□□□□□ -0.3
UBE2F-212ENST00000439338 CSDC2Q9Y534 153 aaKnown RBP13.2□□□□□ -0.3
UBE2F-212ENST00000439338 Q6ZUT4 128 aa13.19□□□□□ -0.3
UBE2F-212ENST00000439338 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.18□□□□□ -0.3
UBE2F-212ENST00000439338 RPL39P62891 51 aaKnown RBP13.18□□□□□ -0.3
UBE2F-212ENST00000439338 TIMM21Q9BVV7 248 aa13.18□□□□□ -0.3
UBE2F-212ENST00000439338 SDIM1Q6ZPB5 146 aa13.17□□□□□ -0.3
UBE2F-212ENST00000439338 SRRM2Q9UQ35 2752 aaKnown RBP13.17□□□□□ -0.3
UBE2F-212ENST00000439338 IGHV3-64A0A075B6Q5 118 aa13.16□□□□□ -0.3
UBE2F-212ENST00000439338 GVQW2A0A096LPI5 108 aaPredicted RBP13.16□□□□□ -0.3
UBE2F-212ENST00000439338 CD164L2Q6UWJ8 174 aa13.16□□□□□ -0.3
UBE2F-212ENST00000439338 SEC11CQ9BY50 192 aa13.16□□□□□ -0.3
UBE2F-212ENST00000439338 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.16□□□□□ -0.3
UBE2F-212ENST00000439338 PANO1I0J062 215 aa13.15□□□□□ -0.3
UBE2F-212ENST00000439338 IMMP2LQ96T52 175 aa13.15□□□□□ -0.3
UBE2F-212ENST00000439338 CTDSP1Q9GZU7 261 aa13.15□□□□□ -0.3
UBE2F-212ENST00000439338 MYCBP2O75592 4640 aa13.15□□□□□ -0.3
UBE2F-212ENST00000439338 TRAV13-1A0A0B4J241 112 aa13.14□□□□□ -0.31
UBE2F-212ENST00000439338 IGHV1-58A0A0C4DH39 117 aa13.14□□□□□ -0.31
UBE2F-212ENST00000439338 LAMTOR2Q9Y2Q5 125 aa13.14□□□□□ -0.31
UBE2F-212ENST00000439338 FLG2Q5D862 2391 aaPredicted RBP13.13□□□□□ -0.31
UBE2F-212ENST00000439338 LOC389332A0A1B0GUA5 103 aa13.13□□□□□ -0.31
UBE2F-212ENST00000439338 C1orf196B1AJZ1 125 aa13.13□□□□□ -0.31
UBE2F-212ENST00000439338 PLA2G1BP04054 148 aaKnown RBP13.13□□□□□ -0.31
UBE2F-212ENST00000439338 MAP1LC3AQ9H492 121 aa13.13□□□□□ -0.31
UBE2F-212ENST00000439338 RAB5AP20339 215 aa13.12□□□□□ -0.31
UBE2F-212ENST00000439338 FAM104AQ969W3 186 aa13.12□□□□□ -0.31
UBE2F-212ENST00000439338 SPANXA1Q9NS26 97 aa13.12□□□□□ -0.31
UBE2F-212ENST00000439338 PRSS47A8MTI9 375 aa13.11□□□□□ -0.31
UBE2F-212ENST00000439338 LINC00526Q96FQ7 95 aa13.11□□□□□ -0.31
UBE2F-212ENST00000439338 OPRPNQ99935 248 aaPredicted RBP13.1□□□□□ -0.31
UBE2F-212ENST00000439338 CHTF8P0CG12 524 aa13.09□□□□□ -0.31
UBE2F-212ENST00000439338 MRPS36P82909 103 aaKnown RBP13.09□□□□□ -0.31
UBE2F-212ENST00000439338 CIRBPQ14011 172 aaKnown RBP13.09□□□□□ -0.31
UBE2F-212ENST00000439338 Q8N8P6 123 aa13.09□□□□□ -0.31
UBE2F-212ENST00000439338 TRAV9-1A0A075B6T8 112 aa13.08□□□□□ -0.32
UBE2F-212ENST00000439338 COX7A2LO14548 114 aa13.08□□□□□ -0.32
UBE2F-212ENST00000439338 MALP21145 153 aa13.07□□□□□ -0.32
UBE2F-212ENST00000439338 IFI27P40305 119 aaPredicted RBP13.07□□□□□ -0.32
UBE2F-212ENST00000439338 COX6A2Q02221 97 aa13.07□□□□□ -0.32
UBE2F-212ENST00000439338 C10orf91Q5T1B1 145 aa13.07□□□□□ -0.32
UBE2F-212ENST00000439338 PKHD1L1Q86WI1 4243 aa13.07□□□□□ -0.32
UBE2F-212ENST00000439338 ZNF561-AS1K7EIQ3 104 aa13.06□□□□□ -0.32
UBE2F-212ENST00000439338 S100PP25815 95 aa13.06□□□□□ -0.32
UBE2F-212ENST00000439338 KIAA1644Q3SXP7 199 aa13.06□□□□□ -0.32
UBE2F-212ENST00000439338 C5orf38Q86SI9 138 aa13.06□□□□□ -0.32
UBE2F-212ENST00000439338 PRSS3P2Q8NHM4 247 aa13.06□□□□□ -0.32
UBE2F-212ENST00000439338 SPACA4Q8TDM5 124 aa13.06□□□□□ -0.32
UBE2F-212ENST00000439338 IFITM10A6NMD0 228 aa13.05□□□□□ -0.32
UBE2F-212ENST00000439338 KRTAP10-4P60372 401 aaPredicted RBP13.05□□□□□ -0.32
UBE2F-212ENST00000439338 CARD19Q96LW7 228 aa13.05□□□□□ -0.32
UBE2F-212ENST00000439338 CARHSP1Q9Y2V2 147 aaKnown RBP13.05□□□□□ -0.32
UBE2F-212ENST00000439338 IGLV4-3A0A075B6K6 122 aa13.04□□□□□ -0.32
UBE2F-212ENST00000439338 DPH3Q96FX2 82 aa13.04□□□□□ -0.32
UBE2F-212ENST00000439338 PYGO1Q9Y3Y4 419 aa13.04□□□□□ -0.32
UBE2F-212ENST00000439338 HERC1Q15751 4861 aa13.03□□□□□ -0.32
UBE2F-212ENST00000439338 RHEBQ15382 184 aa13.03□□□□□ -0.32
UBE2F-212ENST00000439338 IGLV4-69A0A075B6H9 119 aa13.02□□□□□ -0.33
UBE2F-212ENST00000439338 A0A087WYN8 130 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms