RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 PCLOQ9Y6V0 5065 aa11.59□□□□□ -0.55
NCSTN-208ENST00000438008 IGKV3OR2-268A0A0C4DH90 116 aa11.58□□□□□ -0.56
NCSTN-208ENST00000438008 LINC01620Q4KN68 170 aa11.58□□□□□ -0.56
NCSTN-208ENST00000438008 ORMDL3Q8N138 153 aa11.58□□□□□ -0.56
NCSTN-208ENST00000438008 SEC11CQ9BY50 192 aa11.58□□□□□ -0.56
NCSTN-208ENST00000438008 CDC42SE2Q9NRR3 84 aa11.58□□□□□ -0.56
NCSTN-208ENST00000438008 CSDC2Q9Y534 153 aaKnown RBP11.58□□□□□ -0.56
NCSTN-208ENST00000438008 GAGE12HA6NDE8 117 aa11.57□□□□□ -0.56
NCSTN-208ENST00000438008 NPYP01303 97 aa11.57□□□□□ -0.56
NCSTN-208ENST00000438008 SMAGPQ0VAQ4 97 aa11.57□□□□□ -0.56
NCSTN-208ENST00000438008 COMMD7Q86VX2 200 aa11.57□□□□□ -0.56
NCSTN-208ENST00000438008 CHCHD10Q8WYQ3 142 aaPredicted RBP11.57□□□□□ -0.56
NCSTN-208ENST00000438008 SMIM2Q9BVW6 85 aa11.57□□□□□ -0.56
NCSTN-208ENST00000438008 CTDSP1Q9GZU7 261 aa11.57□□□□□ -0.56
NCSTN-208ENST00000438008 ABCA13Q86UQ4 5058 aa11.56□□□□□ -0.56
NCSTN-208ENST00000438008 TMEM136Q6ZRR5 245 aa11.56□□□□□ -0.56
NCSTN-208ENST00000438008 ZNF664Q8N3J9 261 aa11.56□□□□□ -0.56
NCSTN-208ENST00000438008 LINC00959A0A1B0GUT2 108 aa11.55□□□□□ -0.56
NCSTN-208ENST00000438008 EPM2AB3EWF7 344 aa11.55□□□□□ -0.56
NCSTN-208ENST00000438008 HAMPP81172 84 aa11.55□□□□□ -0.56
NCSTN-208ENST00000438008 TMEM18Q96B42 140 aa11.55□□□□□ -0.56
NCSTN-208ENST00000438008 PRELID3AQ96N28 172 aa11.55□□□□□ -0.56
NCSTN-208ENST00000438008 TIMM21Q9BVV7 248 aa11.55□□□□□ -0.56
NCSTN-208ENST00000438008 UBE2D4Q9Y2X8 147 aa11.55□□□□□ -0.56
NCSTN-208ENST00000438008 CNBPP62633 177 aaKnown RBP11.54□□□□□ -0.56
NCSTN-208ENST00000438008 CFAP161Q6P656 301 aa11.54□□□□□ -0.56
NCSTN-208ENST00000438008 C9orf163Q8N9P6 203 aa11.54□□□□□ -0.56
NCSTN-208ENST00000438008 LAMTOR2Q9Y2Q5 125 aa11.54□□□□□ -0.56
NCSTN-208ENST00000438008 hDV102S1A0JD36 115 aa11.53□□□□□ -0.56
NCSTN-208ENST00000438008 PRSS47A8MTI9 375 aa11.53□□□□□ -0.56
NCSTN-208ENST00000438008 FOXI1Q12951 378 aa11.53□□□□□ -0.56
NCSTN-208ENST00000438008 C10orf91Q5T1B1 145 aa11.53□□□□□ -0.56
NCSTN-208ENST00000438008 FAT1Q14517 4588 aa11.53□□□□□ -0.56
NCSTN-208ENST00000438008 SMR3BP02814 79 aaPredicted RBP11.52□□□□□ -0.57
NCSTN-208ENST00000438008 C15orf56Q8N910 161 aa11.52□□□□□ -0.57
NCSTN-208ENST00000438008 TRAV9-1A0A075B6T8 112 aa11.51□□□□□ -0.57
NCSTN-208ENST00000438008 CCL25O15444 150 aa11.51□□□□□ -0.57
NCSTN-208ENST00000438008 SS18Q15532 418 aa11.51□□□□□ -0.57
NCSTN-208ENST00000438008 Q5VSD8 79 aa11.51□□□□□ -0.57
NCSTN-208ENST00000438008 AP5S1Q9NUS5 200 aa11.51□□□□□ -0.57
NCSTN-208ENST00000438008 SLPIP03973 132 aa11.5□□□□□ -0.57
NCSTN-208ENST00000438008 XCL1P47992 114 aa11.5□□□□□ -0.57
NCSTN-208ENST00000438008 CHAC1Q9BUX1 264 aa11.5□□□□□ -0.57
NCSTN-208ENST00000438008 CARHSP1Q9Y2V2 147 aaKnown RBP11.5□□□□□ -0.57
NCSTN-208ENST00000438008 VPS13BQ7Z7G8 4022 aa11.49□□□□□ -0.57
NCSTN-208ENST00000438008 CD164L2Q6UWJ8 174 aa11.49□□□□□ -0.57
NCSTN-208ENST00000438008 SCXQ7RTU7 201 aa11.49□□□□□ -0.57
NCSTN-208ENST00000438008 GVQW2A0A096LPI5 108 aaPredicted RBP11.48□□□□□ -0.57
NCSTN-208ENST00000438008 C1orf196B1AJZ1 125 aa11.48□□□□□ -0.57
NCSTN-208ENST00000438008 FAM229AH3BQW9 127 aa11.48□□□□□ -0.57
NCSTN-208ENST00000438008 RAB5AP20339 215 aa11.48□□□□□ -0.57
NCSTN-208ENST00000438008 RPL39P62891 51 aaKnown RBP11.48□□□□□ -0.57
NCSTN-208ENST00000438008 SDIM1Q6ZPB5 146 aa11.48□□□□□ -0.57
NCSTN-208ENST00000438008 Q6ZUT4 128 aa11.48□□□□□ -0.57
NCSTN-208ENST00000438008 MAP1LC3AQ9H492 121 aa11.48□□□□□ -0.57
NCSTN-208ENST00000438008 SPANXA1Q9NS26 97 aa11.48□□□□□ -0.57
NCSTN-208ENST00000438008 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.47□□□□□ -0.57
NCSTN-208ENST00000438008 FAM104AQ969W3 186 aa11.47□□□□□ -0.57
NCSTN-208ENST00000438008 S100PP25815 95 aa11.46□□□□□ -0.57
NCSTN-208ENST00000438008 MRPS36P82909 103 aaKnown RBP11.46□□□□□ -0.57
NCSTN-208ENST00000438008 RNASE13Q5GAN3 156 aaKnown RBP11.46□□□□□ -0.57
NCSTN-208ENST00000438008 Q8N8P6 123 aa11.46□□□□□ -0.57
NCSTN-208ENST00000438008 IGHV1-58A0A0C4DH39 117 aa11.45□□□□□ -0.58
NCSTN-208ENST00000438008 LOC389332A0A1B0GUA5 103 aa11.45□□□□□ -0.58
NCSTN-208ENST00000438008 RHEBQ15382 184 aa11.45□□□□□ -0.58
NCSTN-208ENST00000438008 HIGD2BQ4VC39 106 aa11.45□□□□□ -0.58
NCSTN-208ENST00000438008 CIRBP-AS1Q8TBR5 109 aa11.45□□□□□ -0.58
NCSTN-208ENST00000438008 IGHV3-64A0A075B6Q5 118 aa11.44□□□□□ -0.58
NCSTN-208ENST00000438008 TRAV13-1A0A0B4J241 112 aa11.44□□□□□ -0.58
NCSTN-208ENST00000438008 PYGO1Q9Y3Y4 419 aa11.44□□□□□ -0.58
NCSTN-208ENST00000438008 K7EMI3 77 aa11.43□□□□□ -0.58
NCSTN-208ENST00000438008 GNB1LQ9BYB4 327 aa11.43□□□□□ -0.58
NCSTN-208ENST00000438008 LINC00528Q8N1L1 170 aa11.42□□□□□ -0.58
NCSTN-208ENST00000438008 OPRPNQ99935 248 aaPredicted RBP11.42□□□□□ -0.58
NCSTN-208ENST00000438008 RPS10P5Q9NQ39 176 aa11.42□□□□□ -0.58
NCSTN-208ENST00000438008 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.42□□□□□ -0.58
NCSTN-208ENST00000438008 COX7A2LO14548 114 aa11.41□□□□□ -0.58
NCSTN-208ENST00000438008 IFI27P40305 119 aaPredicted RBP11.41□□□□□ -0.58
NCSTN-208ENST00000438008 CIRBPQ14011 172 aaKnown RBP11.41□□□□□ -0.58
NCSTN-208ENST00000438008 COX19Q49B96 90 aa11.41□□□□□ -0.58
NCSTN-208ENST00000438008 NXT2Q9NPJ8 142 aaKnown RBP11.41□□□□□ -0.58
NCSTN-208ENST00000438008 INAFM2P0DMQ5 153 aa11.4□□□□□ -0.58
NCSTN-208ENST00000438008 KIAA1644Q3SXP7 199 aa11.4□□□□□ -0.58
NCSTN-208ENST00000438008 ORMDL2Q53FV1 153 aa11.4□□□□□ -0.58
NCSTN-208ENST00000438008 PANO1I0J062 215 aa11.39□□□□□ -0.59
NCSTN-208ENST00000438008 PLA2G1BP04054 148 aaKnown RBP11.39□□□□□ -0.59
NCSTN-208ENST00000438008 MALP21145 153 aa11.39□□□□□ -0.59
NCSTN-208ENST00000438008 CYSLTR1Q9Y271 337 aa11.39□□□□□ -0.59
NCSTN-208ENST00000438008 IGLV4-3A0A075B6K6 122 aa11.38□□□□□ -0.59
NCSTN-208ENST00000438008 ZNF561-AS1K7EIQ3 104 aa11.38□□□□□ -0.59
NCSTN-208ENST00000438008 C2orf66Q6UXQ4 117 aa11.38□□□□□ -0.59
NCSTN-208ENST00000438008 IFITM10A6NMD0 228 aa11.37□□□□□ -0.59
NCSTN-208ENST00000438008 MT-ND6P03923 174 aa11.37□□□□□ -0.59
NCSTN-208ENST00000438008 C5orf38Q86SI9 138 aa11.37□□□□□ -0.59
NCSTN-208ENST00000438008 IGHV3OR16-9A0A0B4J2B5 98 aa11.36□□□□□ -0.59
NCSTN-208ENST00000438008 APOC3P02656 99 aa11.36□□□□□ -0.59
NCSTN-208ENST00000438008 NPSP0C0P6 89 aa11.36□□□□□ -0.59
NCSTN-208ENST00000438008 G0S2P27469 103 aa11.36□□□□□ -0.59
NCSTN-208ENST00000438008 COX6A2Q02221 97 aa11.36□□□□□ -0.59
NCSTN-208ENST00000438008 NDUFA5Q16718 116 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms