RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 NUPR2A6NF83 97 aa4.81□□□□□ -1.64
LSM3P3-201ENST00000436601 LEPROTL1O95214 131 aa4.81□□□□□ -1.64
LSM3P3-201ENST00000436601 FGF6P10767 208 aa4.81□□□□□ -1.64
LSM3P3-201ENST00000436601 G0S2P27469 103 aa4.81□□□□□ -1.64
LSM3P3-201ENST00000436601 GAGE6Q13070 117 aa4.81□□□□□ -1.64
LSM3P3-201ENST00000436601 LELP1Q5T871 98 aa4.81□□□□□ -1.64
LSM3P3-201ENST00000436601 SCGB3A1Q96QR1 104 aa4.81□□□□□ -1.64
LSM3P3-201ENST00000436601 OPRPNQ99935 248 aaPredicted RBP4.81□□□□□ -1.64
LSM3P3-201ENST00000436601 UBE2D4Q9Y2X8 147 aa4.81□□□□□ -1.64
LSM3P3-201ENST00000436601 H7C423 109 aa4.8□□□□□ -1.64
LSM3P3-201ENST00000436601 ZFAND6Q6FIF0 208 aa4.8□□□□□ -1.64
LSM3P3-201ENST00000436601 ERASQ7Z444 233 aa4.8□□□□□ -1.64
LSM3P3-201ENST00000436601 MRPL52Q86TS9 123 aaKnown RBP4.8□□□□□ -1.64
LSM3P3-201ENST00000436601 OR10D4PQ8NGN7 298 aa4.8□□□□□ -1.64
LSM3P3-201ENST00000436601 MPLKIPQ8TAP9 179 aa4.8□□□□□ -1.64
LSM3P3-201ENST00000436601 MUC7Q8TAX7 377 aa4.8□□□□□ -1.64
LSM3P3-201ENST00000436601 IFI27L1Q96BM0 104 aa4.8□□□□□ -1.64
LSM3P3-201ENST00000436601 CHCHD5Q9BSY4 110 aa4.8□□□□□ -1.64
LSM3P3-201ENST00000436601 TIMM21Q9BVV7 248 aa4.8□□□□□ -1.64
LSM3P3-201ENST00000436601 HSPB8Q9UJY1 196 aa4.8□□□□□ -1.64
LSM3P3-201ENST00000436601 KLK5Q9Y337 293 aaPredicted RBP4.8□□□□□ -1.64
LSM3P3-201ENST00000436601 PAM16Q9Y3D7 125 aa4.8□□□□□ -1.64
LSM3P3-201ENST00000436601 PYGO1Q9Y3Y4 419 aa4.8□□□□□ -1.64
LSM3P3-201ENST00000436601 LINC00588Q9Y4M8 146 aa4.8□□□□□ -1.64
LSM3P3-201ENST00000436601 IGLV4-60A0A075B6I1 120 aa4.79□□□□□ -1.64
LSM3P3-201ENST00000436601 IGLV4-3A0A075B6K6 122 aa4.79□□□□□ -1.64
LSM3P3-201ENST00000436601 LOC100996750A0A140TA64 210 aa4.79□□□□□ -1.64
LSM3P3-201ENST00000436601 LINC01549A6NIU2 74 aa4.79□□□□□ -1.64
LSM3P3-201ENST00000436601 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.79□□□□□ -1.64
LSM3P3-201ENST00000436601 UBE2L6O14933 153 aa4.79□□□□□ -1.64
LSM3P3-201ENST00000436601 ATP5LO75964 103 aa4.79□□□□□ -1.64
LSM3P3-201ENST00000436601 C3orf79P0CE67 100 aa4.79□□□□□ -1.64
LSM3P3-201ENST00000436601 ZC2HC1BQ5TFG8 222 aa4.79□□□□□ -1.64
LSM3P3-201ENST00000436601 SPATA12Q7Z6I5 190 aa4.79□□□□□ -1.64
LSM3P3-201ENST00000436601 WFDC10BQ8IUB3 73 aa4.79□□□□□ -1.64
LSM3P3-201ENST00000436601 Q8N976 141 aa4.79□□□□□ -1.64
LSM3P3-201ENST00000436601 TMEM141Q96I45 108 aa4.79□□□□□ -1.64
LSM3P3-201ENST00000436601 TIMM17AQ99595 171 aa4.79□□□□□ -1.64
LSM3P3-201ENST00000436601 KRTAP4-6Q9BYQ5 205 aa4.79□□□□□ -1.64
LSM3P3-201ENST00000436601 SPANXA1Q9NS26 97 aa4.79□□□□□ -1.64
LSM3P3-201ENST00000436601 CSDC2Q9Y534 153 aaKnown RBP4.79□□□□□ -1.64
LSM3P3-201ENST00000436601 HUWE1Q7Z6Z7 4374 aaKnown RBP4.79□□□□□ -1.64
LSM3P3-201ENST00000436601 TRAV8-6A0A0B4J262 113 aa4.78□□□□□ -1.64
LSM3P3-201ENST00000436601 A0A1B0GUV1 79 aa4.78□□□□□ -1.64
LSM3P3-201ENST00000436601 TMEM262E9PQX1 116 aa4.78□□□□□ -1.64
LSM3P3-201ENST00000436601 SYS1-DBNDD2H3BUS1 97 aa4.78□□□□□ -1.64
LSM3P3-201ENST00000436601 CCL18P55774 89 aa4.78□□□□□ -1.64
LSM3P3-201ENST00000436601 TCTAP57738 103 aa4.78□□□□□ -1.64
LSM3P3-201ENST00000436601 KRTDAPP60985 99 aa4.78□□□□□ -1.64
LSM3P3-201ENST00000436601 RBX1P62877 108 aa4.78□□□□□ -1.64
LSM3P3-201ENST00000436601 MRPS36P82909 103 aaKnown RBP4.78□□□□□ -1.64
LSM3P3-201ENST00000436601 MPV17L2Q567V2 206 aa4.78□□□□□ -1.64
LSM3P3-201ENST00000436601 AMMECR1LQ6DCA0 310 aa4.78□□□□□ -1.64
LSM3P3-201ENST00000436601 BAALCQ8WXS3 180 aa4.78□□□□□ -1.64
LSM3P3-201ENST00000436601 MAP1LC3CQ9BXW4 147 aa4.78□□□□□ -1.64
LSM3P3-201ENST00000436601 CDC42SE2Q9NRR3 84 aa4.78□□□□□ -1.64
LSM3P3-201ENST00000436601 MRPS16Q9Y3D3 137 aaKnown RBP4.78□□□□□ -1.64
LSM3P3-201ENST00000436601 COL7A1Q02388 2944 aa4.78□□□□□ -1.64
LSM3P3-201ENST00000436601 PRSS1P07477 247 aa4.77□□□□□ -1.65
LSM3P3-201ENST00000436601 ZNF25P17030 456 aaPredicted RBP4.77□□□□□ -1.65
LSM3P3-201ENST00000436601 RNASE13Q5GAN3 156 aaKnown RBP4.77□□□□□ -1.65
LSM3P3-201ENST00000436601 Q6ZN92 141 aa4.77□□□□□ -1.65
LSM3P3-201ENST00000436601 Q6ZUT4 128 aa4.77□□□□□ -1.65
LSM3P3-201ENST00000436601 Q8N1X5 172 aa4.77□□□□□ -1.65
LSM3P3-201ENST00000436601 ZNF664Q8N3J9 261 aa4.77□□□□□ -1.65
LSM3P3-201ENST00000436601 OR5A1Q8NGJ0 315 aa4.77□□□□□ -1.65
LSM3P3-201ENST00000436601 TMEM101Q96IK0 257 aa4.77□□□□□ -1.65
LSM3P3-201ENST00000436601 AMELXQ99217 191 aa4.77□□□□□ -1.65
LSM3P3-201ENST00000436601 UPK3BQ9BT76 320 aa4.77□□□□□ -1.65
LSM3P3-201ENST00000436601 CST9LQ9H4G1 147 aa4.77□□□□□ -1.65
LSM3P3-201ENST00000436601 DNAH9Q9NYC9 4486 aa4.77□□□□□ -1.65
LSM3P3-201ENST00000436601 A0A087WX48 190 aa4.76□□□□□ -1.65
LSM3P3-201ENST00000436601 TRAV12-1A0A0B4J245 112 aa4.76□□□□□ -1.65
LSM3P3-201ENST00000436601 H0Y8G0 127 aa4.76□□□□□ -1.65
LSM3P3-201ENST00000436601 IGHV3-30P01768 117 aa4.76□□□□□ -1.65
LSM3P3-201ENST00000436601 IGHV3-33P01772 117 aa4.76□□□□□ -1.65
LSM3P3-201ENST00000436601 IGHV3-30-3P0DP02 117 aa4.76□□□□□ -1.65
LSM3P3-201ENST00000436601 IGHV3-30-5P0DP03 117 aa4.76□□□□□ -1.65
LSM3P3-201ENST00000436601 AKR1D1P51857 326 aa4.76□□□□□ -1.65
LSM3P3-201ENST00000436601 SMAGPQ0VAQ4 97 aa4.76□□□□□ -1.65
LSM3P3-201ENST00000436601 GAGE2BQ13066 116 aa4.76□□□□□ -1.65
LSM3P3-201ENST00000436601 PMVKQ15126 192 aa4.76□□□□□ -1.65
LSM3P3-201ENST00000436601 GAGE2EQ4V326 116 aa4.76□□□□□ -1.65
LSM3P3-201ENST00000436601 C10orf25Q5T742 122 aa4.76□□□□□ -1.65
LSM3P3-201ENST00000436601 GAGE2AQ6NT46 116 aa4.76□□□□□ -1.65
LSM3P3-201ENST00000436601 VCX2Q9H322 139 aa4.76□□□□□ -1.65
LSM3P3-201ENST00000436601 GAGE2DQ9UEU5 116 aa4.76□□□□□ -1.65
LSM3P3-201ENST00000436601 DNAH10OSP0CZ25 163 aa4.75□□□□□ -1.65
LSM3P3-201ENST00000436601 PKIAP61925 76 aa4.75□□□□□ -1.65
LSM3P3-201ENST00000436601 JOSD1Q15040 202 aaPredicted RBP4.75□□□□□ -1.65
LSM3P3-201ENST00000436601 LINC01556Q5JQF7 62 aa4.75□□□□□ -1.65
LSM3P3-201ENST00000436601 PAPPA-AS1Q5QFB9 102 aa4.75□□□□□ -1.65
LSM3P3-201ENST00000436601 CASC10Q5T4H9 136 aa4.75□□□□□ -1.65
LSM3P3-201ENST00000436601 LINC01545Q5VT33 79 aa4.75□□□□□ -1.65
LSM3P3-201ENST00000436601 TEX43Q6ZNM6 134 aa4.75□□□□□ -1.65
LSM3P3-201ENST00000436601 LINC00269Q8N2A0 174 aa4.75□□□□□ -1.65
LSM3P3-201ENST00000436601 PMCHL2Q9BQD1 86 aa4.75□□□□□ -1.65
LSM3P3-201ENST00000436601 IGLV4-69A0A075B6H9 119 aa4.74□□□□□ -1.65
LSM3P3-201ENST00000436601 A0A0J9YXV3 536 aa4.74□□□□□ -1.65
LSM3P3-201ENST00000436601 C3orf84H3BNL1 204 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms