RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 MAP1LC3B2A6NCE7 125 aa5.07□□□□□ -1.6
NIF3L1-208ENST00000436412 C1orf137Q5JT78 98 aa5.07□□□□□ -1.6
NIF3L1-208ENST00000436412 AKR1C8PQ5T2L2 129 aa5.07□□□□□ -1.6
NIF3L1-208ENST00000436412 BAGE2Q86Y30 109 aa5.07□□□□□ -1.6
NIF3L1-208ENST00000436412 ISOC2Q96AB3 205 aa5.07□□□□□ -1.6
NIF3L1-208ENST00000436412 MAP1LC3BQ9GZQ8 125 aa5.07□□□□□ -1.6
NIF3L1-208ENST00000436412 TRAV1-1A0A0B4J248 108 aa5.06□□□□□ -1.6
NIF3L1-208ENST00000436412 A4D1N5 150 aa5.06□□□□□ -1.6
NIF3L1-208ENST00000436412 UPK1BO75841 260 aa5.06□□□□□ -1.6
NIF3L1-208ENST00000436412 NCR2O95944 276 aa5.06□□□□□ -1.6
NIF3L1-208ENST00000436412 TRGC1P0CF51 173 aa5.06□□□□□ -1.6
NIF3L1-208ENST00000436412 FGF6P10767 208 aa5.06□□□□□ -1.6
NIF3L1-208ENST00000436412 ZNF25P17030 456 aaPredicted RBP5.06□□□□□ -1.6
NIF3L1-208ENST00000436412 RPL13AP40429 203 aaKnown RBP5.06□□□□□ -1.6
NIF3L1-208ENST00000436412 DEFA3P59666 94 aa5.06□□□□□ -1.6
NIF3L1-208ENST00000436412 GAGE2BQ13066 116 aa5.06□□□□□ -1.6
NIF3L1-208ENST00000436412 RNASEKQ6P5S7 137 aaKnown RBP5.06□□□□□ -1.6
NIF3L1-208ENST00000436412 OR5A1Q8NGJ0 315 aa5.06□□□□□ -1.6
NIF3L1-208ENST00000436412 NDUFA13Q9P0J0 144 aa5.06□□□□□ -1.6
NIF3L1-208ENST00000436412 A0A1W2PNN7 141 aa5.05□□□□□ -1.6
NIF3L1-208ENST00000436412 F2Z2F3 143 aa5.05□□□□□ -1.6
NIF3L1-208ENST00000436412 H0Y9J4 135 aa5.05□□□□□ -1.6
NIF3L1-208ENST00000436412 IGLV7-43P04211 117 aa5.05□□□□□ -1.6
NIF3L1-208ENST00000436412 IGLC6P0CF74 106 aa5.05□□□□□ -1.6
NIF3L1-208ENST00000436412 NTF3P20783 257 aa5.05□□□□□ -1.6
NIF3L1-208ENST00000436412 XCL1P47992 114 aa5.05□□□□□ -1.6
NIF3L1-208ENST00000436412 CAMPP49913 170 aa5.05□□□□□ -1.6
NIF3L1-208ENST00000436412 RPS20P60866 119 aaKnown RBP5.05□□□□□ -1.6
NIF3L1-208ENST00000436412 LCE1EQ5T753 118 aa5.05□□□□□ -1.6
NIF3L1-208ENST00000436412 RPL7L1Q6DKI1 246 aaKnown RBP5.05□□□□□ -1.6
NIF3L1-208ENST00000436412 TSKUQ8WUA8 353 aa5.05□□□□□ -1.6
NIF3L1-208ENST00000436412 LINC00526Q96FQ7 95 aa5.05□□□□□ -1.6
NIF3L1-208ENST00000436412 LINC00959A0A1B0GUT2 108 aa5.04□□□□□ -1.6
NIF3L1-208ENST00000436412 XKRY2A2RUG3 117 aa5.04□□□□□ -1.6
NIF3L1-208ENST00000436412 CCL25O15444 150 aa5.04□□□□□ -1.6
NIF3L1-208ENST00000436412 PAGE4O60829 102 aa5.04□□□□□ -1.6
NIF3L1-208ENST00000436412 EIF5AP63241 154 aaKnown RBP5.04□□□□□ -1.6
NIF3L1-208ENST00000436412 C9orf116Q5BN46 136 aaPredicted RBP5.04□□□□□ -1.6
NIF3L1-208ENST00000436412 CD164L2Q6UWJ8 174 aa5.04□□□□□ -1.6
NIF3L1-208ENST00000436412 TMEM101Q96IK0 257 aa5.04□□□□□ -1.6
NIF3L1-208ENST00000436412 BTF3L4Q96K17 158 aa5.04□□□□□ -1.6
NIF3L1-208ENST00000436412 TPPP3Q9BW30 176 aa5.04□□□□□ -1.6
NIF3L1-208ENST00000436412 IGLV4-69A0A075B6H9 119 aa5.03□□□□□ -1.6
NIF3L1-208ENST00000436412 PFDN1O60925 122 aa5.03□□□□□ -1.6
NIF3L1-208ENST00000436412 APOMO95445 188 aa5.03□□□□□ -1.6
NIF3L1-208ENST00000436412 APCSP02743 223 aa5.03□□□□□ -1.6
NIF3L1-208ENST00000436412 PCP4P48539 62 aa5.03□□□□□ -1.6
NIF3L1-208ENST00000436412 UBE2D1P51668 147 aa5.03□□□□□ -1.6
NIF3L1-208ENST00000436412 SS18Q15532 418 aa5.03□□□□□ -1.6
NIF3L1-208ENST00000436412 TMUB2Q71RG4 321 aa5.03□□□□□ -1.6
NIF3L1-208ENST00000436412 OR2D3Q8NGH3 330 aa5.03□□□□□ -1.6
NIF3L1-208ENST00000436412 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.02□□□□□ -1.61
NIF3L1-208ENST00000436412 A0A087WZ39 114 aa5.02□□□□□ -1.61
NIF3L1-208ENST00000436412 IGKV2-29A2NJV5 120 aaPredicted RBP5.02□□□□□ -1.61
NIF3L1-208ENST00000436412 KRTAP1-4P0C5Y4 121 aa5.02□□□□□ -1.61
NIF3L1-208ENST00000436412 DEFA1P59665 94 aa5.02□□□□□ -1.61
NIF3L1-208ENST00000436412 IFITM3Q01628 133 aa5.02□□□□□ -1.61
NIF3L1-208ENST00000436412 EIF5AL1Q6IS14 154 aaKnown RBP5.02□□□□□ -1.61
NIF3L1-208ENST00000436412 TEX261Q6UWH6 196 aa5.02□□□□□ -1.61
NIF3L1-208ENST00000436412 PHF5AQ7RTV0 110 aaKnown RBP5.02□□□□□ -1.61
NIF3L1-208ENST00000436412 NUP35Q8NFH5 326 aa5.02□□□□□ -1.61
NIF3L1-208ENST00000436412 C2orf48Q96LS8 159 aa5.02□□□□□ -1.61
NIF3L1-208ENST00000436412 FAM210AQ96ND0 272 aa5.02□□□□□ -1.61
NIF3L1-208ENST00000436412 CARHSP1Q9Y2V2 147 aaKnown RBP5.02□□□□□ -1.61
NIF3L1-208ENST00000436412 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.01□□□□□ -1.61
NIF3L1-208ENST00000436412 BCL2P10415 239 aa5.01□□□□□ -1.61
NIF3L1-208ENST00000436412 MEF2BQ02080 365 aaPredicted RBP5.01□□□□□ -1.61
NIF3L1-208ENST00000436412 RPL18AQ02543 176 aaKnown RBP5.01□□□□□ -1.61
NIF3L1-208ENST00000436412 GATD1Q8NB37 220 aa5.01□□□□□ -1.61
NIF3L1-208ENST00000436412 CAMK2N2Q96S95 79 aa5.01□□□□□ -1.61
NIF3L1-208ENST00000436412 SDHAF1A6NFY7 115 aa5□□□□□ -1.61
NIF3L1-208ENST00000436412 COX7A2LO14548 114 aa5□□□□□ -1.61
NIF3L1-208ENST00000436412 IFNA1P01562 189 aa5□□□□□ -1.61
NIF3L1-208ENST00000436412 ESDP10768 282 aa5□□□□□ -1.61
NIF3L1-208ENST00000436412 RPL35P42766 123 aaKnown RBP5□□□□□ -1.61
NIF3L1-208ENST00000436412 LYZL1Q6UWQ5 148 aa5□□□□□ -1.61
NIF3L1-208ENST00000436412 C9orf62Q8N4C0 152 aa5□□□□□ -1.61
NIF3L1-208ENST00000436412 SFT2D1Q8WV19 159 aa5□□□□□ -1.61
NIF3L1-208ENST00000436412 MBD3L1Q8WWY6 194 aa5□□□□□ -1.61
NIF3L1-208ENST00000436412 SMIM12Q96EX1 92 aa5□□□□□ -1.61
NIF3L1-208ENST00000436412 C19orf71A6NCJ1 209 aa4.99□□□□□ -1.61
NIF3L1-208ENST00000436412 C1orf196B1AJZ1 125 aa4.99□□□□□ -1.61
NIF3L1-208ENST00000436412 I3L3M4 83 aa4.99□□□□□ -1.61
NIF3L1-208ENST00000436412 BCL2L11O43521 198 aa4.99□□□□□ -1.61
NIF3L1-208ENST00000436412 Q5BKY6 102 aa4.99□□□□□ -1.61
NIF3L1-208ENST00000436412 MRPL52Q86TS9 123 aaKnown RBP4.99□□□□□ -1.61
NIF3L1-208ENST00000436412 MRAP2Q96G30 205 aa4.99□□□□□ -1.61
NIF3L1-208ENST00000436412 IMMP2LQ96T52 175 aa4.99□□□□□ -1.61
NIF3L1-208ENST00000436412 CNFNQ9BYD5 112 aa4.99□□□□□ -1.61
NIF3L1-208ENST00000436412 CDC42SE2Q9NRR3 84 aa4.99□□□□□ -1.61
NIF3L1-208ENST00000436412 ALG5Q9Y673 324 aa4.99□□□□□ -1.61
NIF3L1-208ENST00000436412 MUC17Q685J3 4493 aa4.98□□□□□ -1.61
NIF3L1-208ENST00000436412 FXYD6-FXYD2A0A087WZ82 144 aa4.98□□□□□ -1.61
NIF3L1-208ENST00000436412 UMAD1C9J7I0 102 aa4.98□□□□□ -1.61
NIF3L1-208ENST00000436412 F8WDY8 70 aa4.98□□□□□ -1.61
NIF3L1-208ENST00000436412 GIPP09681 153 aaPredicted RBP4.98□□□□□ -1.61
NIF3L1-208ENST00000436412 PMCHP20382 165 aa4.98□□□□□ -1.61
NIF3L1-208ENST00000436412 CTRLP40313 264 aa4.98□□□□□ -1.61
NIF3L1-208ENST00000436412 SMIM15Q7Z3B0 74 aa4.98□□□□□ -1.61
NIF3L1-208ENST00000436412 KCNRGQ8N5I3 272 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms