RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 MRPS36P82909 103 aaKnown RBP11.14□□□□□ -0.63
CTDSPL-204ENST00000435525 TOMM6Q96B49 74 aa11.14□□□□□ -0.63
CTDSPL-204ENST00000435525 CDC42SE2Q9NRR3 84 aa11.14□□□□□ -0.63
CTDSPL-204ENST00000435525 PRR34Q9NV39 138 aa11.14□□□□□ -0.63
CTDSPL-204ENST00000435525 IGKV2D-24A0A075B6R9 120 aa11.13□□□□□ -0.63
CTDSPL-204ENST00000435525 HBDP02042 147 aa11.13□□□□□ -0.63
CTDSPL-204ENST00000435525 CLPSL2Q6UWE3 100 aa11.13□□□□□ -0.63
CTDSPL-204ENST00000435525 SCGB3A1Q96QR1 104 aa11.13□□□□□ -0.63
CTDSPL-204ENST00000435525 IGKV3OR2-268A0A0C4DH90 116 aa11.12□□□□□ -0.63
CTDSPL-204ENST00000435525 CCL25O15444 150 aa11.12□□□□□ -0.63
CTDSPL-204ENST00000435525 SS18Q15532 418 aa11.12□□□□□ -0.63
CTDSPL-204ENST00000435525 TMEM141Q96I45 108 aa11.12□□□□□ -0.63
CTDSPL-204ENST00000435525 ALMS1Q8TCU4 4167 aa11.11□□□□□ -0.63
CTDSPL-204ENST00000435525 ENHOQ6UWT2 76 aa11.11□□□□□ -0.63
CTDSPL-204ENST00000435525 LINC00336Q6ZUF6 198 aa11.11□□□□□ -0.63
CTDSPL-204ENST00000435525 ERASQ7Z444 233 aa11.11□□□□□ -0.63
CTDSPL-204ENST00000435525 TIMM17AQ99595 171 aa11.11□□□□□ -0.63
CTDSPL-204ENST00000435525 C2orf88Q9BSF0 95 aa11.11□□□□□ -0.63
CTDSPL-204ENST00000435525 PLECQ15149 4684 aaKnown RBP11.11□□□□□ -0.63
CTDSPL-204ENST00000435525 HIST1H2BKO60814 126 aa11.1□□□□□ -0.63
CTDSPL-204ENST00000435525 HIST1H2BJP06899 126 aa11.1□□□□□ -0.63
CTDSPL-204ENST00000435525 HIST1H2BOP23527 126 aa11.1□□□□□ -0.63
CTDSPL-204ENST00000435525 HIST1H2BBP33778 126 aa11.1□□□□□ -0.63
CTDSPL-204ENST00000435525 HIST1H2BDP58876 126 aa11.1□□□□□ -0.63
CTDSPL-204ENST00000435525 HIST1H2BCP62807 126 aa11.1□□□□□ -0.63
CTDSPL-204ENST00000435525 HIST2H2BEQ16778 126 aa11.1□□□□□ -0.63
CTDSPL-204ENST00000435525 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.1□□□□□ -0.63
CTDSPL-204ENST00000435525 TEX43Q6ZNM6 134 aa11.1□□□□□ -0.63
CTDSPL-204ENST00000435525 Q6ZUT4 128 aa11.1□□□□□ -0.63
CTDSPL-204ENST00000435525 HIST1H2BHQ93079 126 aa11.1□□□□□ -0.63
CTDSPL-204ENST00000435525 HIST1H2BNQ99877 126 aa11.1□□□□□ -0.63
CTDSPL-204ENST00000435525 HIST1H2BMQ99879 126 aa11.1□□□□□ -0.63
CTDSPL-204ENST00000435525 VCX2Q9H322 139 aa11.1□□□□□ -0.63
CTDSPL-204ENST00000435525 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.09□□□□□ -0.63
CTDSPL-204ENST00000435525 EREGO14944 169 aa11.09□□□□□ -0.63
CTDSPL-204ENST00000435525 ATP5LO75964 103 aa11.09□□□□□ -0.63
CTDSPL-204ENST00000435525 IGLV4-3A0A075B6K6 122 aa11.08□□□□□ -0.64
CTDSPL-204ENST00000435525 IFITM10A6NMD0 228 aa11.08□□□□□ -0.64
CTDSPL-204ENST00000435525 SERF1AO75920 110 aa11.08□□□□□ -0.64
CTDSPL-204ENST00000435525 URB1-AS1Q96HZ7 61 aa11.08□□□□□ -0.64
CTDSPL-204ENST00000435525 TRAV13-1A0A0B4J241 112 aa11.07□□□□□ -0.64
CTDSPL-204ENST00000435525 LINC00959A0A1B0GUT2 108 aa11.07□□□□□ -0.64
CTDSPL-204ENST00000435525 IGIPA6NJ69 53 aa11.07□□□□□ -0.64
CTDSPL-204ENST00000435525 IGLV10-54A0A075B6I4 117 aa11.06□□□□□ -0.64
CTDSPL-204ENST00000435525 PMCHL1Q16048 86 aa11.06□□□□□ -0.64
CTDSPL-204ENST00000435525 RNASE13Q5GAN3 156 aaKnown RBP11.06□□□□□ -0.64
CTDSPL-204ENST00000435525 RTL8CO15255 209 aa11.05□□□□□ -0.64
CTDSPL-204ENST00000435525 SEC11AP67812 179 aa11.05□□□□□ -0.64
CTDSPL-204ENST00000435525 CHCHD10Q8WYQ3 142 aaPredicted RBP11.05□□□□□ -0.64
CTDSPL-204ENST00000435525 OPRPNQ99935 248 aaPredicted RBP11.05□□□□□ -0.64
CTDSPL-204ENST00000435525 PRSS29PA6NIE9 313 aa11.04□□□□□ -0.64
CTDSPL-204ENST00000435525 Q6ZRN7 208 aaPredicted RBP11.04□□□□□ -0.64
CTDSPL-204ENST00000435525 GAGE12HA6NDE8 117 aa11.03□□□□□ -0.64
CTDSPL-204ENST00000435525 XCL1P47992 114 aa11.03□□□□□ -0.64
CTDSPL-204ENST00000435525 NDUFA6P56556 154 aa11.03□□□□□ -0.64
CTDSPL-204ENST00000435525 C14orf177Q52M58 125 aa11.03□□□□□ -0.64
CTDSPL-204ENST00000435525 PDZD11Q5EBL8 140 aa11.03□□□□□ -0.64
CTDSPL-204ENST00000435525 CFAP161Q6P656 301 aa11.03□□□□□ -0.64
CTDSPL-204ENST00000435525 HSPB8Q9UJY1 196 aa11.03□□□□□ -0.64
CTDSPL-204ENST00000435525 A0A096LNJ9 63 aa11.02□□□□□ -0.65
CTDSPL-204ENST00000435525 LEPROTL1O95214 131 aa11.02□□□□□ -0.65
CTDSPL-204ENST00000435525 PMVKQ15126 192 aa11.02□□□□□ -0.65
CTDSPL-204ENST00000435525 CD164L2Q6UWJ8 174 aa11.02□□□□□ -0.65
CTDSPL-204ENST00000435525 FAM19A2Q8N3H0 131 aa11.02□□□□□ -0.65
CTDSPL-204ENST00000435525 AMELXQ99217 191 aa11.02□□□□□ -0.65
CTDSPL-204ENST00000435525 S100A6P06703 90 aa11.01□□□□□ -0.65
CTDSPL-204ENST00000435525 PRSS1P07477 247 aa11.01□□□□□ -0.65
CTDSPL-204ENST00000435525 IFI27L1Q96BM0 104 aa11.01□□□□□ -0.65
CTDSPL-204ENST00000435525 COA6Q5JTJ3 125 aaKnown RBP11□□□□□ -0.65
CTDSPL-204ENST00000435525 VPS13DQ5THJ4 4388 aa11□□□□□ -0.65
CTDSPL-204ENST00000435525 COX7A2LO14548 114 aa10.99□□□□□ -0.65
CTDSPL-204ENST00000435525 MALP21145 153 aa10.99□□□□□ -0.65
CTDSPL-204ENST00000435525 BAALCQ8WXS3 180 aa10.99□□□□□ -0.65
CTDSPL-204ENST00000435525 FAM104AQ969W3 186 aa10.99□□□□□ -0.65
CTDSPL-204ENST00000435525 PACRGQ96M98 296 aaPredicted RBP10.99□□□□□ -0.65
CTDSPL-204ENST00000435525 CST9LQ9H4G1 147 aa10.99□□□□□ -0.65
CTDSPL-204ENST00000435525 GEMIN7Q9H840 131 aaKnown RBP10.99□□□□□ -0.65
CTDSPL-204ENST00000435525 APOMO95445 188 aa10.98□□□□□ -0.65
CTDSPL-204ENST00000435525 UBE2D1P51668 147 aa10.98□□□□□ -0.65
CTDSPL-204ENST00000435525 LINC00310P59036 64 aa10.98□□□□□ -0.65
CTDSPL-204ENST00000435525 HERVK_113P63121 156 aa10.98□□□□□ -0.65
CTDSPL-204ENST00000435525 TNP2Q05952 138 aa10.98□□□□□ -0.65
CTDSPL-204ENST00000435525 DNAH1Q9P2D7 4330 aa10.98□□□□□ -0.65
CTDSPL-204ENST00000435525 A0A087WTM6 91 aa10.97□□□□□ -0.65
CTDSPL-204ENST00000435525 FABP4P15090 132 aa10.97□□□□□ -0.65
CTDSPL-204ENST00000435525 LINC00173Q6ZV60 143 aa10.97□□□□□ -0.65
CTDSPL-204ENST00000435525 NUPR1O60356 82 aa10.96□□□□□ -0.65
CTDSPL-204ENST00000435525 FOXI1Q12951 378 aa10.96□□□□□ -0.65
CTDSPL-204ENST00000435525 KRTAP26-1Q6PEX3 210 aa10.96□□□□□ -0.65
CTDSPL-204ENST00000435525 LYSTQ99698 3801 aa10.96□□□□□ -0.65
CTDSPL-204ENST00000435525 IGHV1-58A0A0C4DH39 117 aa10.95□□□□□ -0.66
CTDSPL-204ENST00000435525 USP17L23D6RBM5 183 aa10.95□□□□□ -0.66
CTDSPL-204ENST00000435525 S100A2P29034 98 aa10.95□□□□□ -0.66
CTDSPL-204ENST00000435525 LINC00242Q5T6M2 205 aa10.95□□□□□ -0.66
CTDSPL-204ENST00000435525 ZC2HC1BQ5TFG8 222 aa10.95□□□□□ -0.66
CTDSPL-204ENST00000435525 MAP1LC3CQ9BXW4 147 aa10.95□□□□□ -0.66
CTDSPL-204ENST00000435525 TRAV12-1A0A0B4J245 112 aa10.94□□□□□ -0.66
CTDSPL-204ENST00000435525 TINCRA0A1B0GVN0 87 aa10.94□□□□□ -0.66
CTDSPL-204ENST00000435525 LRCOL1A6NCL2 159 aa10.94□□□□□ -0.66
CTDSPL-204ENST00000435525 LECT2O14960 151 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms