RNA–Protein interactions for RNA: ENST00000432292.7

PMS1-212, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-212ENST00000432292 PPP1R17O96001 155 aa12□□□□□ -0.49
PMS1-212ENST00000432292 SLURP1P55000 103 aa12□□□□□ -0.49
PMS1-212ENST00000432292 KRTAP1-3Q8IUG1 177 aa12□□□□□ -0.49
PMS1-212ENST00000432292 FSHBP01225 129 aa12□□□□□ -0.49
PMS1-212ENST00000432292 LINC00315P59091 139 aa11.99□□□□□ -0.49
PMS1-212ENST00000432292 NACAE9PAV3 2078 aa11.98□□□□□ -0.49
PMS1-212ENST00000432292 HERVK_113P63121 156 aa11.98□□□□□ -0.49
PMS1-212ENST00000432292 I3L3M4 83 aa11.98□□□□□ -0.49
PMS1-212ENST00000432292 K7EMT4 169 aa11.98□□□□□ -0.49
PMS1-212ENST00000432292 IGHV3-30-3P0DP02 117 aa11.98□□□□□ -0.49
PMS1-212ENST00000432292 RS1O15537 224 aa11.97□□□□□ -0.49
PMS1-212ENST00000432292 A0A0U1RRA0 63 aa11.97□□□□□ -0.49
PMS1-212ENST00000432292 H3BT86 120 aa11.97□□□□□ -0.49
PMS1-212ENST00000432292 LENEPQ9Y5L5 61 aa11.97□□□□□ -0.49
PMS1-212ENST00000432292 KIF25-AS1Q9Y6Z4 181 aa11.97□□□□□ -0.49
PMS1-212ENST00000432292 FN1P02751 2386 aaKnown RBP11.97□□□□□ -0.49
PMS1-212ENST00000432292 NDUFA7O95182 113 aa11.96□□□□□ -0.49
PMS1-212ENST00000432292 HTN1P15515 57 aa11.96□□□□□ -0.49
PMS1-212ENST00000432292 SPINK13Q1W4C9 94 aa11.96□□□□□ -0.49
PMS1-212ENST00000432292 C2CD3Q4AC94 2353 aa11.96□□□□□ -0.49
PMS1-212ENST00000432292 GCN1Q92616 2671 aaKnown RBP11.96□□□□□ -0.49
PMS1-212ENST00000432292 TIMM21Q9BVV7 248 aa11.96□□□□□ -0.49
PMS1-212ENST00000432292 SPANXA1Q9NS26 97 aa11.96□□□□□ -0.49
PMS1-212ENST00000432292 TRBV7-7A0A0K0K1E9 115 aa11.96□□□□□ -0.5
PMS1-212ENST00000432292 SMCR5Q8TEV8 140 aa11.96□□□□□ -0.5
PMS1-212ENST00000432292 HIVEP2P31629 2446 aa11.95□□□□□ -0.5
PMS1-212ENST00000432292 A0A1W2PRX2 142 aa11.95□□□□□ -0.5
PMS1-212ENST00000432292 EDA2RQ9HAV5 297 aa11.95□□□□□ -0.5
PMS1-212ENST00000432292 PDZD2O15018 2839 aa11.95□□□□□ -0.5
PMS1-212ENST00000432292 C3orf22Q8N5N4 141 aa11.94□□□□□ -0.5
PMS1-212ENST00000432292 POM121L12Q8N7R1 296 aa11.94□□□□□ -0.5
PMS1-212ENST00000432292 DNAJC30Q96LL9 226 aa11.94□□□□□ -0.5
PMS1-212ENST00000432292 UBE2E2Q96LR5 201 aa11.94□□□□□ -0.5
PMS1-212ENST00000432292 NDUFA12Q9UI09 145 aa11.94□□□□□ -0.5
PMS1-212ENST00000432292 LST1O00453 97 aa11.94□□□□□ -0.5
PMS1-212ENST00000432292 SNRPD3P62318 126 aaKnown RBP11.94□□□□□ -0.5
PMS1-212ENST00000432292 FAM19A5Q7Z5A7 132 aaPredicted RBP11.93□□□□□ -0.5
PMS1-212ENST00000432292 LRRC75A-AS1Q8N1F1 130 aa11.93□□□□□ -0.5
PMS1-212ENST00000432292 FAM19A4Q96LR4 140 aa11.93□□□□□ -0.5
PMS1-212ENST00000432292 LITAFQ99732 161 aa11.93□□□□□ -0.5
PMS1-212ENST00000432292 KNCNA6PVL3 124 aa11.92□□□□□ -0.5
PMS1-212ENST00000432292 PRM2P04554 102 aa11.92□□□□□ -0.5
PMS1-212ENST00000432292 K7EQG2 157 aa11.92□□□□□ -0.5
PMS1-212ENST00000432292 FAM240AA0A1B0GVK7 77 aa11.92□□□□□ -0.5
PMS1-212ENST00000432292 IGLV4-3A0A075B6K6 122 aa11.91□□□□□ -0.5
PMS1-212ENST00000432292 TRBV27A0A0K0K1C4 114 aa11.91□□□□□ -0.5
PMS1-212ENST00000432292 A0A0J9YX75 114 aa11.91□□□□□ -0.5
PMS1-212ENST00000432292 CD28P10747 220 aa11.91□□□□□ -0.5
PMS1-212ENST00000432292 SETXQ7Z333 2677 aaKnown RBP11.91□□□□□ -0.5
PMS1-212ENST00000432292 IGHV3-73A0A0B4J1V6 119 aa11.9□□□□□ -0.5
PMS1-212ENST00000432292 KLLNB2CW77 178 aa11.9□□□□□ -0.5
PMS1-212ENST00000432292 ZNF625Q96I27 306 aaPredicted RBP11.9□□□□□ -0.5
PMS1-212ENST00000432292 TMEM89A2RUT3 159 aa11.9□□□□□ -0.5
PMS1-212ENST00000432292 DEFB131AP59861 70 aa11.9□□□□□ -0.51
PMS1-212ENST00000432292 SMIM9A6NGZ8 99 aa11.89□□□□□ -0.51
PMS1-212ENST00000432292 RHOHQ15669 191 aa11.89□□□□□ -0.51
PMS1-212ENST00000432292 C5orf47Q569G3 176 aa11.89□□□□□ -0.51
PMS1-212ENST00000432292 UQCRQO14949 82 aa11.89□□□□□ -0.51
PMS1-212ENST00000432292 TMEM61Q8N0U2 210 aa11.88□□□□□ -0.51
PMS1-212ENST00000432292 C20orf203Q8NBC4 194 aa11.88□□□□□ -0.51
PMS1-212ENST00000432292 hADV29S1A0JD25 119 aa11.88□□□□□ -0.51
PMS1-212ENST00000432292 ESM1Q9NQ30 184 aa11.88□□□□□ -0.51
PMS1-212ENST00000432292 DNAJC9-AS1A6NH13 148 aa11.88□□□□□ -0.51
PMS1-212ENST00000432292 MIAQ16674 131 aa11.87□□□□□ -0.51
PMS1-212ENST00000432292 GAGE2AQ6NT46 116 aa11.87□□□□□ -0.51
PMS1-212ENST00000432292 LINC01600Q96MT4 127 aa11.87□□□□□ -0.51
PMS1-212ENST00000432292 KMT2BQ9UMN6 2715 aaPredicted RBP11.87□□□□□ -0.51
PMS1-212ENST00000432292 J3KT08 172 aa11.87□□□□□ -0.51
PMS1-212ENST00000432292 M0QY20 66 aa11.86□□□□□ -0.51
PMS1-212ENST00000432292 APRG1Q8IVJ8 170 aa11.86□□□□□ -0.51
PMS1-212ENST00000432292 MED14OSP0DP75 135 aa11.86□□□□□ -0.51
PMS1-212ENST00000432292 J3QKU1 62 aa11.86□□□□□ -0.51
PMS1-212ENST00000432292 PLA2G2AP14555 144 aa11.86□□□□□ -0.51
PMS1-212ENST00000432292 DAZ2Q13117 558 aaKnown RBP11.86□□□□□ -0.51
PMS1-212ENST00000432292 NSUN5P1Q3KNT7 163 aa11.86□□□□□ -0.51
PMS1-212ENST00000432292 DAZ4Q86SG3 579 aaKnown RBP11.86□□□□□ -0.51
PMS1-212ENST00000432292 DAZ3Q9NR90 486 aaKnown RBP11.86□□□□□ -0.51
PMS1-212ENST00000432292 NXPH4O95158 308 aa11.85□□□□□ -0.51
PMS1-212ENST00000432292 DEFB121Q5J5C9 76 aa11.85□□□□□ -0.51
PMS1-212ENST00000432292 LINC00526Q96FQ7 95 aa11.85□□□□□ -0.51
PMS1-212ENST00000432292 CYSTM1Q9H1C7 97 aa11.85□□□□□ -0.51
PMS1-212ENST00000432292 TRAV13-1A0A0B4J241 112 aa11.84□□□□□ -0.51
PMS1-212ENST00000432292 DYNLRB2Q8TF09 96 aa11.84□□□□□ -0.51
PMS1-212ENST00000432292 LINC00643Q86TS7 51 aa11.84□□□□□ -0.51
PMS1-212ENST00000432292 AKAP9Q99996 3911 aa11.84□□□□□ -0.51
PMS1-212ENST00000432292 SMR3AQ99954 134 aa11.84□□□□□ -0.51
PMS1-212ENST00000432292 IGHV1-58A0A0C4DH39 117 aa11.83□□□□□ -0.52
PMS1-212ENST00000432292 RNF152Q8N8N0 203 aa11.83□□□□□ -0.52
PMS1-212ENST00000432292 KIR2DL5BQ8NHK3 375 aa11.83□□□□□ -0.52
PMS1-212ENST00000432292 RBMY1A1P0DJD3 496 aaKnown RBP11.82□□□□□ -0.52
PMS1-212ENST00000432292 RBMY1CP0DJD4 496 aa11.82□□□□□ -0.52
PMS1-212ENST00000432292 RBMY1FQ15415 496 aaKnown RBP11.82□□□□□ -0.52
PMS1-212ENST00000432292 Q8N2B8 174 aa11.82□□□□□ -0.52
PMS1-212ENST00000432292 CITED2Q99967 270 aaPredicted RBP11.82□□□□□ -0.52
PMS1-212ENST00000432292 SPANXDQ9BXN6 97 aa11.82□□□□□ -0.52
PMS1-212ENST00000432292 IMUPQ9GZP8 106 aa11.82□□□□□ -0.52
PMS1-212ENST00000432292 SPANXCQ9NY87 97 aa11.82□□□□□ -0.52
PMS1-212ENST00000432292 IGHV1OR15-1A0A075B7D0 117 aa11.82□□□□□ -0.52
PMS1-212ENST00000432292 IGHV3-16A0A0C4DH30 117 aa11.82□□□□□ -0.52
PMS1-212ENST00000432292 PROK1P58294 105 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms