RNA–Protein interactions for RNA: ENST00000431533.6

RPL28-204, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-204ENST00000431533 A0A1B0GW15 77 aa9.9□□□□□ -0.82
RPL28-204ENST00000431533 VCYO14598 125 aa9.9□□□□□ -0.82
RPL28-204ENST00000431533 PPP1R17O96001 155 aa9.9□□□□□ -0.82
RPL28-204ENST00000431533 CKS2P33552 79 aa9.9□□□□□ -0.82
RPL28-204ENST00000431533 RPL37AP61513 92 aaKnown RBP9.9□□□□□ -0.82
RPL28-204ENST00000431533 HBBP68871 147 aa9.9□□□□□ -0.82
RPL28-204ENST00000431533 S100A8P05109 93 aa9.89□□□□□ -0.83
RPL28-204ENST00000431533 HIGD2BQ4VC39 106 aa9.89□□□□□ -0.83
RPL28-204ENST00000431533 C9orf163Q8N9P6 203 aa9.89□□□□□ -0.83
RPL28-204ENST00000431533 F8W036 122 aa9.88□□□□□ -0.83
RPL28-204ENST00000431533 PPP1R2P9O14990 202 aa9.88□□□□□ -0.83
RPL28-204ENST00000431533 XCL1P47992 114 aa9.88□□□□□ -0.83
RPL28-204ENST00000431533 KRTAP10-4P60372 401 aaPredicted RBP9.88□□□□□ -0.83
RPL28-204ENST00000431533 C15orf56Q8N910 161 aa9.88□□□□□ -0.83
RPL28-204ENST00000431533 KIR2DL4Q99706 377 aa9.88□□□□□ -0.83
RPL28-204ENST00000431533 A0A1B0GXF2 115 aa9.87□□□□□ -0.83
RPL28-204ENST00000431533 D6R8Y8 96 aa9.87□□□□□ -0.83
RPL28-204ENST00000431533 CCL25O15444 150 aa9.87□□□□□ -0.83
RPL28-204ENST00000431533 CFAP161Q6P656 301 aa9.87□□□□□ -0.83
RPL28-204ENST00000431533 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.86□□□□□ -0.83
RPL28-204ENST00000431533 LINC00959A0A1B0GUT2 108 aa9.86□□□□□ -0.83
RPL28-204ENST00000431533 LINC00862A6NCI5 91 aa9.86□□□□□ -0.83
RPL28-204ENST00000431533 TNFRSF6BO95407 300 aa9.86□□□□□ -0.83
RPL28-204ENST00000431533 RNASE13Q5GAN3 156 aaKnown RBP9.86□□□□□ -0.83
RPL28-204ENST00000431533 CLLU1Q5K131 121 aa9.86□□□□□ -0.83
RPL28-204ENST00000431533 CDC42SE2Q9NRR3 84 aa9.86□□□□□ -0.83
RPL28-204ENST00000431533 SLPIP03973 132 aa9.85□□□□□ -0.83
RPL28-204ENST00000431533 CNBPP62633 177 aaKnown RBP9.85□□□□□ -0.83
RPL28-204ENST00000431533 PNRC1Q12796 327 aaPredicted RBP9.85□□□□□ -0.83
RPL28-204ENST00000431533 FOXI1Q12951 378 aa9.85□□□□□ -0.83
RPL28-204ENST00000431533 SS18Q15532 418 aa9.85□□□□□ -0.83
RPL28-204ENST00000431533 MRPL52Q86TS9 123 aaKnown RBP9.85□□□□□ -0.83
RPL28-204ENST00000431533 ZNF664Q8N3J9 261 aa9.85□□□□□ -0.83
RPL28-204ENST00000431533 C20orf78Q9BR46 151 aa9.85□□□□□ -0.83
RPL28-204ENST00000431533 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.85□□□□□ -0.83
RPL28-204ENST00000431533 IGHV3-64A0A075B6Q5 118 aa9.84□□□□□ -0.83
RPL28-204ENST00000431533 NPYP01303 97 aa9.84□□□□□ -0.83
RPL28-204ENST00000431533 MT-ND4LP03901 98 aa9.84□□□□□ -0.83
RPL28-204ENST00000431533 ATP5L2Q7Z4Y8 100 aa9.84□□□□□ -0.83
RPL28-204ENST00000431533 SMIM2Q9BVW6 85 aa9.84□□□□□ -0.83
RPL28-204ENST00000431533 TRBV24-1A0A075B6N3 115 aa9.83□□□□□ -0.84
RPL28-204ENST00000431533 PANO1I0J062 215 aa9.83□□□□□ -0.84
RPL28-204ENST00000431533 SMAGPQ0VAQ4 97 aa9.83□□□□□ -0.84
RPL28-204ENST00000431533 SDIM1Q6ZPB5 146 aa9.83□□□□□ -0.84
RPL28-204ENST00000431533 TMEM18Q96B42 140 aa9.83□□□□□ -0.84
RPL28-204ENST00000431533 ANAPC16Q96DE5 110 aa9.83□□□□□ -0.84
RPL28-204ENST00000431533 UBE2D4Q9Y2X8 147 aa9.83□□□□□ -0.84
RPL28-204ENST00000431533 Q6ZUT4 128 aa9.82□□□□□ -0.84
RPL28-204ENST00000431533 DPH3Q96FX2 82 aa9.82□□□□□ -0.84
RPL28-204ENST00000431533 TCAPO15273 167 aa9.81□□□□□ -0.84
RPL28-204ENST00000431533 PPBPP02775 128 aa9.81□□□□□ -0.84
RPL28-204ENST00000431533 CHTF8P0CG12 524 aa9.81□□□□□ -0.84
RPL28-204ENST00000431533 RPL39P62891 51 aaKnown RBP9.81□□□□□ -0.84
RPL28-204ENST00000431533 IFITM2Q01629 132 aa9.81□□□□□ -0.84
RPL28-204ENST00000431533 ORMDL3Q8N138 153 aa9.81□□□□□ -0.84
RPL28-204ENST00000431533 LINC00526Q96FQ7 95 aa9.81□□□□□ -0.84
RPL28-204ENST00000431533 PRELID3AQ96N28 172 aa9.81□□□□□ -0.84
RPL28-204ENST00000431533 GVQW2A0A096LPI5 108 aaPredicted RBP9.8□□□□□ -0.84
RPL28-204ENST00000431533 TRAV13-1A0A0B4J241 112 aa9.8□□□□□ -0.84
RPL28-204ENST00000431533 RPL32P62910 135 aaKnown RBP9.8□□□□□ -0.84
RPL28-204ENST00000431533 CD164L2Q6UWJ8 174 aa9.8□□□□□ -0.84
RPL28-204ENST00000431533 TMEM136Q6ZRR5 245 aa9.8□□□□□ -0.84
RPL28-204ENST00000431533 IGHV1-58A0A0C4DH39 117 aa9.79□□□□□ -0.84
RPL28-204ENST00000431533 LOC389332A0A1B0GUA5 103 aa9.79□□□□□ -0.84
RPL28-204ENST00000431533 PHOX2AO14813 284 aa9.79□□□□□ -0.84
RPL28-204ENST00000431533 Q6ZRU5 148 aa9.79□□□□□ -0.84
RPL28-204ENST00000431533 CSDC2Q9Y534 153 aaKnown RBP9.79□□□□□ -0.84
RPL28-204ENST00000431533 ADCYAP1P18509 176 aa9.78□□□□□ -0.84
RPL28-204ENST00000431533 COX6A2Q02221 97 aa9.78□□□□□ -0.84
RPL28-204ENST00000431533 TIMM21Q9BVV7 248 aa9.78□□□□□ -0.84
RPL28-204ENST00000431533 IGKV2-24A0A0C4DH68 120 aa9.77□□□□□ -0.85
RPL28-204ENST00000431533 C1orf196B1AJZ1 125 aa9.77□□□□□ -0.85
RPL28-204ENST00000431533 RAB5AP20339 215 aa9.77□□□□□ -0.85
RPL28-204ENST00000431533 MALP21145 153 aa9.77□□□□□ -0.85
RPL28-204ENST00000431533 OPRPNQ99935 248 aaPredicted RBP9.77□□□□□ -0.85
RPL28-204ENST00000431533 TMEM218A2RU14 115 aa9.76□□□□□ -0.85
RPL28-204ENST00000431533 ZNF561-AS1K7EIQ3 104 aa9.76□□□□□ -0.85
RPL28-204ENST00000431533 COX7A2LO14548 114 aa9.76□□□□□ -0.85
RPL28-204ENST00000431533 UQCC3Q6UW78 93 aa9.76□□□□□ -0.85
RPL28-204ENST00000431533 PRSS3P2Q8NHM4 247 aa9.76□□□□□ -0.85
RPL28-204ENST00000431533 MAP1LC3AQ9H492 121 aa9.76□□□□□ -0.85
RPL28-204ENST00000431533 LRP1Q07954 4544 aaKnown RBP9.76□□□□□ -0.85
RPL28-204ENST00000431533 A0A087WYN8 130 aa9.75□□□□□ -0.85
RPL28-204ENST00000431533 C5orf38Q86SI9 138 aa9.75□□□□□ -0.85
RPL28-204ENST00000431533 COMMD7Q86VX2 200 aa9.75□□□□□ -0.85
RPL28-204ENST00000431533 SPACA4Q8TDM5 124 aa9.75□□□□□ -0.85
RPL28-204ENST00000431533 CARD19Q96LW7 228 aa9.75□□□□□ -0.85
RPL28-204ENST00000431533 SPANXA1Q9NS26 97 aa9.75□□□□□ -0.85
RPL28-204ENST00000431533 HNRNPA3P51991 378 aaKnown RBP9.74□□□□□ -0.85
RPL28-204ENST00000431533 CIRBPQ14011 172 aaKnown RBP9.74□□□□□ -0.85
RPL28-204ENST00000431533 MAJINQ3KP22 176 aa9.74□□□□□ -0.85
RPL28-204ENST00000431533 CTDSP1Q9GZU7 261 aa9.74□□□□□ -0.85
RPL28-204ENST00000431533 IFITM10A6NMD0 228 aa9.73□□□□□ -0.85
RPL28-204ENST00000431533 IFI27P40305 119 aaPredicted RBP9.73□□□□□ -0.85
RPL28-204ENST00000431533 HMCN2Q8NDA2 5059 aa9.72□□□□□ -0.85
RPL28-204ENST00000431533 IGLV4-69A0A075B6H9 119 aa9.72□□□□□ -0.85
RPL28-204ENST00000431533 SYCNQ0VAF6 134 aa9.72□□□□□ -0.85
RPL28-204ENST00000431533 LAMTOR2Q9Y2Q5 125 aa9.72□□□□□ -0.85
RPL28-204ENST00000431533 A0A096LNI7 61 aa9.71□□□□□ -0.86
RPL28-204ENST00000431533 MRPS36P82909 103 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms