RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 TMEM191AQ9H0A3 160 aa7.41□□□□□ -1.22
HDAC4-202ENST00000430200 OSTCQ9NRP0 149 aa7.41□□□□□ -1.22
HDAC4-202ENST00000430200 AP5S1Q9NUS5 200 aa7.41□□□□□ -1.22
HDAC4-202ENST00000430200 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.4□□□□□ -1.22
HDAC4-202ENST00000430200 TRBV27A0A0K0K1C4 114 aa7.4□□□□□ -1.22
HDAC4-202ENST00000430200 LINC00959A0A1B0GUT2 108 aa7.4□□□□□ -1.22
HDAC4-202ENST00000430200 ZNF727A8MUV8 499 aa7.4□□□□□ -1.22
HDAC4-202ENST00000430200 RNASE13Q5GAN3 156 aaKnown RBP7.4□□□□□ -1.22
HDAC4-202ENST00000430200 NUP35Q8NFH5 326 aa7.4□□□□□ -1.22
HDAC4-202ENST00000430200 H7C423 109 aa7.39□□□□□ -1.23
HDAC4-202ENST00000430200 ZNF25P17030 456 aaPredicted RBP7.39□□□□□ -1.23
HDAC4-202ENST00000430200 PMCHP20382 165 aa7.39□□□□□ -1.23
HDAC4-202ENST00000430200 RPL23P62829 140 aaKnown RBP7.39□□□□□ -1.23
HDAC4-202ENST00000430200 SMIM15Q7Z3B0 74 aa7.39□□□□□ -1.23
HDAC4-202ENST00000430200 MRPL52Q86TS9 123 aaKnown RBP7.39□□□□□ -1.23
HDAC4-202ENST00000430200 ST20Q9HBF5 79 aa7.39□□□□□ -1.23
HDAC4-202ENST00000430200 TEX261Q6UWH6 196 aa7.38□□□□□ -1.23
HDAC4-202ENST00000430200 FAM104AQ969W3 186 aa7.38□□□□□ -1.23
HDAC4-202ENST00000430200 MRAP2Q96G30 205 aa7.38□□□□□ -1.23
HDAC4-202ENST00000430200 CDC42SE2Q9NRR3 84 aa7.38□□□□□ -1.23
HDAC4-202ENST00000430200 C7orf77A4D0Y5 90 aa7.37□□□□□ -1.23
HDAC4-202ENST00000430200 NDUFS6O75380 124 aaKnown RBP7.37□□□□□ -1.23
HDAC4-202ENST00000430200 PRR3P79522 188 aaKnown RBP7.37□□□□□ -1.23
HDAC4-202ENST00000430200 MAJINQ3KP22 176 aa7.37□□□□□ -1.23
HDAC4-202ENST00000430200 Q6ZUT4 128 aa7.37□□□□□ -1.23
HDAC4-202ENST00000430200 MRPL51Q4U2R6 128 aaKnown RBP7.36□□□□□ -1.23
HDAC4-202ENST00000430200 STPG4Q8N801 248 aa7.36□□□□□ -1.23
HDAC4-202ENST00000430200 BORCS7Q96B45 105 aa7.36□□□□□ -1.23
HDAC4-202ENST00000430200 UBE2D4Q9Y2X8 147 aa7.36□□□□□ -1.23
HDAC4-202ENST00000430200 SUMO2P61956 95 aaKnown RBP7.35□□□□□ -1.23
HDAC4-202ENST00000430200 ADIRFQ15847 76 aa7.35□□□□□ -1.23
HDAC4-202ENST00000430200 SERTAD4-AS1Q5TG53 156 aa7.35□□□□□ -1.23
HDAC4-202ENST00000430200 CFAP161Q6P656 301 aa7.35□□□□□ -1.23
HDAC4-202ENST00000430200 ZNF664Q8N3J9 261 aa7.35□□□□□ -1.23
HDAC4-202ENST00000430200 CARD19Q96LW7 228 aa7.35□□□□□ -1.23
HDAC4-202ENST00000430200 PLA2G2DQ9UNK4 145 aa7.35□□□□□ -1.23
HDAC4-202ENST00000430200 IGHV1-58A0A0C4DH39 117 aa7.34□□□□□ -1.23
HDAC4-202ENST00000430200 SMIM27A0A1W2PRY6 76 aa7.34□□□□□ -1.23
HDAC4-202ENST00000430200 RPL39P62891 51 aaKnown RBP7.34□□□□□ -1.23
HDAC4-202ENST00000430200 CD164L2Q6UWJ8 174 aa7.34□□□□□ -1.23
HDAC4-202ENST00000430200 Q6ZRU5 148 aa7.34□□□□□ -1.23
HDAC4-202ENST00000430200 TMEM101Q96IK0 257 aa7.34□□□□□ -1.23
HDAC4-202ENST00000430200 BTF3L4Q96K17 158 aa7.34□□□□□ -1.23
HDAC4-202ENST00000430200 IGLV4-69A0A075B6H9 119 aa7.33□□□□□ -1.24
HDAC4-202ENST00000430200 TMEM241Q24JQ0 296 aa7.33□□□□□ -1.24
HDAC4-202ENST00000430200 FAM74A3Q4VXF1 159 aa7.33□□□□□ -1.24
HDAC4-202ENST00000430200 FAM104BQ5XKR9 115 aa7.33□□□□□ -1.24
HDAC4-202ENST00000430200 DPH3Q96FX2 82 aa7.33□□□□□ -1.24
HDAC4-202ENST00000430200 NAT8BQ9UHF3 227 aa7.33□□□□□ -1.24
HDAC4-202ENST00000430200 A0A1B0GXF2 115 aa7.32□□□□□ -1.24
HDAC4-202ENST00000430200 NPYP01303 97 aa7.32□□□□□ -1.24
HDAC4-202ENST00000430200 CAMPP49913 170 aa7.32□□□□□ -1.24
HDAC4-202ENST00000430200 RIGQ13278 110 aa7.32□□□□□ -1.24
HDAC4-202ENST00000430200 OPRPNQ99935 248 aaPredicted RBP7.32□□□□□ -1.24
HDAC4-202ENST00000430200 NAT8Q9UHE5 227 aa7.32□□□□□ -1.24
HDAC4-202ENST00000430200 RNF213Q63HN8 5207 aa7.31□□□□□ -1.24
HDAC4-202ENST00000430200 TRAV13-1A0A0B4J241 112 aa7.31□□□□□ -1.24
HDAC4-202ENST00000430200 VCYO14598 125 aa7.31□□□□□ -1.24
HDAC4-202ENST00000430200 FCER1GP30273 86 aa7.31□□□□□ -1.24
HDAC4-202ENST00000430200 SYCNQ0VAF6 134 aa7.31□□□□□ -1.24
HDAC4-202ENST00000430200 SS18Q15532 418 aa7.31□□□□□ -1.24
HDAC4-202ENST00000430200 MRPL54Q6P161 138 aaKnown RBP7.31□□□□□ -1.24
HDAC4-202ENST00000430200 C7orf33Q8WU49 177 aa7.31□□□□□ -1.24
HDAC4-202ENST00000430200 A0A1W2PNN7 141 aa7.3□□□□□ -1.24
HDAC4-202ENST00000430200 D6R8Y8 96 aa7.3□□□□□ -1.24
HDAC4-202ENST00000430200 PTTG1IPP53801 180 aa7.3□□□□□ -1.24
HDAC4-202ENST00000430200 C5orf38Q86SI9 138 aa7.3□□□□□ -1.24
HDAC4-202ENST00000430200 SMIM2Q9BVW6 85 aa7.3□□□□□ -1.24
HDAC4-202ENST00000430200 CSDC2Q9Y534 153 aaKnown RBP7.3□□□□□ -1.24
HDAC4-202ENST00000430200 TRBV24-1A0A075B6N3 115 aa7.29□□□□□ -1.24
HDAC4-202ENST00000430200 A0A0J9YXV3 536 aa7.29□□□□□ -1.24
HDAC4-202ENST00000430200 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.29□□□□□ -1.24
HDAC4-202ENST00000430200 COX7A2LO14548 114 aa7.29□□□□□ -1.24
HDAC4-202ENST00000430200 TNFRSF6BO95407 300 aa7.29□□□□□ -1.24
HDAC4-202ENST00000430200 C1orf196B1AJZ1 125 aa7.28□□□□□ -1.24
HDAC4-202ENST00000430200 TCAPO15273 167 aa7.28□□□□□ -1.24
HDAC4-202ENST00000430200 RPL32P62910 135 aaKnown RBP7.28□□□□□ -1.24
HDAC4-202ENST00000430200 KIR2DL4Q99706 377 aa7.28□□□□□ -1.24
HDAC4-202ENST00000430200 TIMM21Q9BVV7 248 aa7.28□□□□□ -1.24
HDAC4-202ENST00000430200 LPAP08519 4548 aa7.27□□□□□ -1.25
HDAC4-202ENST00000430200 ZNF561-AS1K7EIQ3 104 aa7.27□□□□□ -1.25
HDAC4-202ENST00000430200 PPP1R2P9O14990 202 aa7.27□□□□□ -1.25
HDAC4-202ENST00000430200 CKS2P33552 79 aa7.27□□□□□ -1.25
HDAC4-202ENST00000430200 HBBP68871 147 aa7.27□□□□□ -1.25
HDAC4-202ENST00000430200 SPAG11BQ08648 103 aa7.27□□□□□ -1.25
HDAC4-202ENST00000430200 GAGE2BQ13066 116 aa7.27□□□□□ -1.25
HDAC4-202ENST00000430200 KRTAP11-1Q8IUC1 163 aa7.27□□□□□ -1.25
HDAC4-202ENST00000430200 LINC01600Q96MT4 127 aa7.27□□□□□ -1.25
HDAC4-202ENST00000430200 C20orf78Q9BR46 151 aa7.27□□□□□ -1.25
HDAC4-202ENST00000430200 SRSF9Q13242 221 aaKnown RBP eCLIP7.26□□□□□ -1.25
HDAC4-202ENST00000430200 C10orf25Q5T742 122 aa7.26□□□□□ -1.25
HDAC4-202ENST00000430200 CAMK2N2Q96S95 79 aa7.26□□□□□ -1.25
HDAC4-202ENST00000430200 IGHV3OR16-9A0A0B4J2B5 98 aa7.25□□□□□ -1.25
HDAC4-202ENST00000430200 LOC107984640A0A0U1RRK4 108 aa7.25□□□□□ -1.25
HDAC4-202ENST00000430200 LINC00862A6NCI5 91 aa7.25□□□□□ -1.25
HDAC4-202ENST00000430200 APOMO95445 188 aa7.25□□□□□ -1.25
HDAC4-202ENST00000430200 PPP1R17O96001 155 aa7.25□□□□□ -1.25
HDAC4-202ENST00000430200 MALP21145 153 aa7.25□□□□□ -1.25
HDAC4-202ENST00000430200 KRTAP7-1Q8IUC3 87 aa7.25□□□□□ -1.25
HDAC4-202ENST00000430200 A0A1B0GW15 77 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms