RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 CFAP161Q6P656 301 aa10.74□□□□□ -0.69
CPSF4-203ENST00000430038 EIF5A2Q9GZV4 153 aaKnown RBP10.74□□□□□ -0.69
CPSF4-203ENST00000430038 OSTCQ9NRP0 149 aa10.74□□□□□ -0.69
CPSF4-203ENST00000430038 A0A096LNI7 61 aa10.73□□□□□ -0.69
CPSF4-203ENST00000430038 IGKV2-24A0A0C4DH68 120 aa10.73□□□□□ -0.69
CPSF4-203ENST00000430038 C9JQL5 133 aa10.73□□□□□ -0.69
CPSF4-203ENST00000430038 CCL25O15444 150 aa10.73□□□□□ -0.69
CPSF4-203ENST00000430038 ST20Q9HBF5 79 aa10.73□□□□□ -0.69
CPSF4-203ENST00000430038 CDC42SE2Q9NRR3 84 aa10.73□□□□□ -0.69
CPSF4-203ENST00000430038 TRBV27A0A0K0K1C4 114 aa10.72□□□□□ -0.69
CPSF4-203ENST00000430038 ZNF727A8MUV8 499 aa10.72□□□□□ -0.69
CPSF4-203ENST00000430038 NDUFS6O75380 124 aaKnown RBP10.72□□□□□ -0.69
CPSF4-203ENST00000430038 ZNF25P17030 456 aaPredicted RBP10.72□□□□□ -0.69
CPSF4-203ENST00000430038 MAJINQ3KP22 176 aa10.72□□□□□ -0.69
CPSF4-203ENST00000430038 Q6ZRU5 148 aa10.72□□□□□ -0.69
CPSF4-203ENST00000430038 NUP35Q8NFH5 326 aa10.72□□□□□ -0.69
CPSF4-203ENST00000430038 MRPL52Q86TS9 123 aaKnown RBP10.71□□□□□ -0.69
CPSF4-203ENST00000430038 NRACQ8N912 160 aa10.71□□□□□ -0.69
CPSF4-203ENST00000430038 SRSF3P84103 164 aaKnown RBP10.7□□□□□ -0.7
CPSF4-203ENST00000430038 ODF1Q14990 250 aa10.7□□□□□ -0.7
CPSF4-203ENST00000430038 STPG4Q8N801 248 aa10.7□□□□□ -0.7
CPSF4-203ENST00000430038 PLA2G2DQ9UNK4 145 aa10.7□□□□□ -0.7
CPSF4-203ENST00000430038 ZNF664Q8N3J9 261 aa10.69□□□□□ -0.7
CPSF4-203ENST00000430038 ISOC2Q96AB3 205 aa10.69□□□□□ -0.7
CPSF4-203ENST00000430038 MRAP2Q96G30 205 aa10.69□□□□□ -0.7
CPSF4-203ENST00000430038 RPL23P62829 140 aaKnown RBP10.68□□□□□ -0.7
CPSF4-203ENST00000430038 RNASE13Q5GAN3 156 aaKnown RBP10.68□□□□□ -0.7
CPSF4-203ENST00000430038 BORCS7Q96B45 105 aa10.68□□□□□ -0.7
CPSF4-203ENST00000430038 TMEM101Q96IK0 257 aa10.68□□□□□ -0.7
CPSF4-203ENST00000430038 BTF3L4Q96K17 158 aa10.68□□□□□ -0.7
CPSF4-203ENST00000430038 FAM104AQ969W3 186 aa10.67□□□□□ -0.7
CPSF4-203ENST00000430038 IGHV1-58A0A0C4DH39 117 aa10.66□□□□□ -0.7
CPSF4-203ENST00000430038 C7orf77A4D0Y5 90 aa10.66□□□□□ -0.7
CPSF4-203ENST00000430038 MRPL51Q4U2R6 128 aaKnown RBP10.66□□□□□ -0.7
CPSF4-203ENST00000430038 CD164L2Q6UWJ8 174 aa10.66□□□□□ -0.7
CPSF4-203ENST00000430038 UBE2D4Q9Y2X8 147 aa10.66□□□□□ -0.7
CPSF4-203ENST00000430038 VCYO14598 125 aa10.65□□□□□ -0.7
CPSF4-203ENST00000430038 PRR3P79522 188 aaKnown RBP10.65□□□□□ -0.7
CPSF4-203ENST00000430038 TMEM241Q24JQ0 296 aa10.65□□□□□ -0.7
CPSF4-203ENST00000430038 SUMO2P61956 95 aaKnown RBP10.64□□□□□ -0.71
CPSF4-203ENST00000430038 RIGQ13278 110 aa10.64□□□□□ -0.71
CPSF4-203ENST00000430038 SS18Q15532 418 aa10.64□□□□□ -0.71
CPSF4-203ENST00000430038 FAM104BQ5XKR9 115 aa10.64□□□□□ -0.71
CPSF4-203ENST00000430038 SMIM27A0A1W2PRY6 76 aa10.63□□□□□ -0.71
CPSF4-203ENST00000430038 FAM74A3Q4VXF1 159 aa10.63□□□□□ -0.71
CPSF4-203ENST00000430038 C7orf33Q8WU49 177 aa10.63□□□□□ -0.71
CPSF4-203ENST00000430038 CARD19Q96LW7 228 aa10.63□□□□□ -0.71
CPSF4-203ENST00000430038 IGLV4-69A0A075B6H9 119 aa10.62□□□□□ -0.71
CPSF4-203ENST00000430038 SYCNQ0VAF6 134 aa10.62□□□□□ -0.71
CPSF4-203ENST00000430038 ADIRFQ15847 76 aa10.62□□□□□ -0.71
CPSF4-203ENST00000430038 Q6ZUT4 128 aa10.62□□□□□ -0.71
CPSF4-203ENST00000430038 NAT8BQ9UHF3 227 aa10.62□□□□□ -0.71
CPSF4-203ENST00000430038 CSDC2Q9Y534 153 aaKnown RBP10.62□□□□□ -0.71
CPSF4-203ENST00000430038 LRP2P98164 4655 aa10.62□□□□□ -0.71
CPSF4-203ENST00000430038 A0A1W2PNN7 141 aa10.61□□□□□ -0.71
CPSF4-203ENST00000430038 FCER1GP30273 86 aa10.61□□□□□ -0.71
CPSF4-203ENST00000430038 CAMPP49913 170 aa10.61□□□□□ -0.71
CPSF4-203ENST00000430038 TRAV13-1A0A0B4J241 112 aa10.6□□□□□ -0.71
CPSF4-203ENST00000430038 RPL39P62891 51 aaKnown RBP10.6□□□□□ -0.71
CPSF4-203ENST00000430038 C5orf38Q86SI9 138 aa10.6□□□□□ -0.71
CPSF4-203ENST00000430038 LINC01600Q96MT4 127 aa10.6□□□□□ -0.71
CPSF4-203ENST00000430038 OPRPNQ99935 248 aaPredicted RBP10.6□□□□□ -0.71
CPSF4-203ENST00000430038 TRBV24-1A0A075B6N3 115 aa10.59□□□□□ -0.71
CPSF4-203ENST00000430038 C1orf196B1AJZ1 125 aa10.59□□□□□ -0.71
CPSF4-203ENST00000430038 ZNF561-AS1K7EIQ3 104 aa10.59□□□□□ -0.71
CPSF4-203ENST00000430038 PTTG1IPP53801 180 aa10.59□□□□□ -0.71
CPSF4-203ENST00000430038 SRSF9Q13242 221 aaKnown RBP eCLIP10.59□□□□□ -0.71
CPSF4-203ENST00000430038 NAT8Q9UHE5 227 aa10.59□□□□□ -0.71
CPSF4-203ENST00000430038 A0A0J9YXV3 536 aa10.57□□□□□ -0.72
CPSF4-203ENST00000430038 COX7A2LO14548 114 aa10.57□□□□□ -0.72
CPSF4-203ENST00000430038 TNFRSF6BO95407 300 aa10.57□□□□□ -0.72
CPSF4-203ENST00000430038 GAGE2BQ13066 116 aa10.57□□□□□ -0.72
CPSF4-203ENST00000430038 KIR2DL4Q99706 377 aa10.57□□□□□ -0.72
CPSF4-203ENST00000430038 TIMM21Q9BVV7 248 aa10.57□□□□□ -0.72
CPSF4-203ENST00000430038 A0A1B0GXF2 115 aa10.56□□□□□ -0.72
CPSF4-203ENST00000430038 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.56□□□□□ -0.72
CPSF4-203ENST00000430038 NPYP01303 97 aa10.56□□□□□ -0.72
CPSF4-203ENST00000430038 KRTAP10-8P60410 259 aa10.56□□□□□ -0.72
CPSF4-203ENST00000430038 MRPL54Q6P161 138 aaKnown RBP10.56□□□□□ -0.72
CPSF4-203ENST00000430038 C20orf78Q9BR46 151 aa10.56□□□□□ -0.72
CPSF4-203ENST00000430038 LINC00474Q9P2X8 69 aa10.56□□□□□ -0.72
CPSF4-203ENST00000430038 LINC00862A6NCI5 91 aa10.55□□□□□ -0.72
CPSF4-203ENST00000430038 D6R8Y8 96 aa10.55□□□□□ -0.72
CPSF4-203ENST00000430038 PPP1R17O96001 155 aa10.55□□□□□ -0.72
CPSF4-203ENST00000430038 MALP21145 153 aa10.55□□□□□ -0.72
CPSF4-203ENST00000430038 CKS2P33552 79 aa10.55□□□□□ -0.72
CPSF4-203ENST00000430038 RPL32P62910 135 aaKnown RBP10.55□□□□□ -0.72
CPSF4-203ENST00000430038 RNF213Q63HN8 5207 aa10.54□□□□□ -0.72
CPSF4-203ENST00000430038 LOC107984640A0A0U1RRK4 108 aa10.54□□□□□ -0.72
CPSF4-203ENST00000430038 PPP1R2P9O14990 202 aa10.54□□□□□ -0.72
CPSF4-203ENST00000430038 TCAPO15273 167 aa10.54□□□□□ -0.72
CPSF4-203ENST00000430038 CAMK2N2Q96S95 79 aa10.54□□□□□ -0.72
CPSF4-203ENST00000430038 SMIM2Q9BVW6 85 aa10.54□□□□□ -0.72
CPSF4-203ENST00000430038 PEA15Q15121 130 aa10.53□□□□□ -0.72
CPSF4-203ENST00000430038 C2orf48Q96LS8 159 aa10.53□□□□□ -0.72
CPSF4-203ENST00000430038 IGHV3OR16-9A0A0B4J2B5 98 aa10.52□□□□□ -0.73
CPSF4-203ENST00000430038 C9orf116Q5BN46 136 aaPredicted RBP10.52□□□□□ -0.73
CPSF4-203ENST00000430038 C10orf25Q5T742 122 aa10.52□□□□□ -0.73
CPSF4-203ENST00000430038 SPINK6Q6UWN8 80 aa10.52□□□□□ -0.73
CPSF4-203ENST00000430038 APOMO95445 188 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms