RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 SUMO2P61956 95 aaKnown RBP8.42□□□□□ -1.06
CECR3-201ENST00000428828 PMVKQ15126 192 aa8.42□□□□□ -1.06
CECR3-201ENST00000428828 ANK2Q01484 3957 aa8.42□□□□□ -1.06
CECR3-201ENST00000428828 IGLV4-69A0A075B6H9 119 aa8.42□□□□□ -1.06
CECR3-201ENST00000428828 IGHV7-4-1A0A0J9YVY3 117 aa8.42□□□□□ -1.06
CECR3-201ENST00000428828 C2orf66Q6UXQ4 117 aa8.42□□□□□ -1.06
CECR3-201ENST00000428828 PKD1L1Q8TDX9 2849 aa8.42□□□□□ -1.06
CECR3-201ENST00000428828 H7C423 109 aa8.41□□□□□ -1.06
CECR3-201ENST00000428828 K7EMT4 169 aa8.41□□□□□ -1.06
CECR3-201ENST00000428828 TMEM141Q96I45 108 aa8.41□□□□□ -1.06
CECR3-201ENST00000428828 RHPN1-AS1Q9BWJ2 59 aa8.41□□□□□ -1.06
CECR3-201ENST00000428828 IGKV3-7A0A075B6H7 116 aa8.41□□□□□ -1.06
CECR3-201ENST00000428828 EIF4EBP3O60516 100 aaPredicted RBP8.41□□□□□ -1.06
CECR3-201ENST00000428828 CRYGDP07320 174 aa8.41□□□□□ -1.06
CECR3-201ENST00000428828 C5orf38Q86SI9 138 aa8.41□□□□□ -1.06
CECR3-201ENST00000428828 DYNLRB2Q8TF09 96 aa8.41□□□□□ -1.06
CECR3-201ENST00000428828 IGKV3D-20A0A0C4DH25 116 aa8.4□□□□□ -1.06
CECR3-201ENST00000428828 SDHAF1A6NFY7 115 aa8.4□□□□□ -1.06
CECR3-201ENST00000428828 BUB3O43684 328 aa8.4□□□□□ -1.06
CECR3-201ENST00000428828 COX6CP09669 75 aa8.4□□□□□ -1.06
CECR3-201ENST00000428828 EMP1P54849 157 aa8.4□□□□□ -1.06
CECR3-201ENST00000428828 TMEM258P61165 79 aa8.4□□□□□ -1.06
CECR3-201ENST00000428828 RPL11P62913 178 aaKnown RBP8.4□□□□□ -1.06
CECR3-201ENST00000428828 GAGE2AQ6NT46 116 aa8.4□□□□□ -1.06
CECR3-201ENST00000428828 J3QQQ9 107 aa8.39□□□□□ -1.07
CECR3-201ENST00000428828 TMEM223A0PJW6 202 aa8.39□□□□□ -1.07
CECR3-201ENST00000428828 LGALS3P17931 250 aaKnown RBP8.39□□□□□ -1.07
CECR3-201ENST00000428828 HIST1H4AP62805 103 aaKnown RBP8.39□□□□□ -1.07
CECR3-201ENST00000428828 Q8TAT8 98 aa8.39□□□□□ -1.07
CECR3-201ENST00000428828 TIMM17AQ99595 171 aa8.39□□□□□ -1.07
CECR3-201ENST00000428828 U3KQE9 123 aa8.39□□□□□ -1.07
CECR3-201ENST00000428828 ATOX1O00244 68 aa8.38□□□□□ -1.07
CECR3-201ENST00000428828 LST1O00453 97 aa8.38□□□□□ -1.07
CECR3-201ENST00000428828 LEPROTO15243 131 aa8.38□□□□□ -1.07
CECR3-201ENST00000428828 TRIAP1O43715 76 aa8.38□□□□□ -1.07
CECR3-201ENST00000428828 C2orf48Q96LS8 159 aa8.38□□□□□ -1.07
CECR3-201ENST00000428828 AGPAT4-IT1Q9H0P7 198 aa8.38□□□□□ -1.07
CECR3-201ENST00000428828 IGIPA6NJ69 53 aa8.37□□□□□ -1.07
CECR3-201ENST00000428828 TSPEAR-AS2P59090 65 aa8.37□□□□□ -1.07
CECR3-201ENST00000428828 TRAV26-2A0A0B4J265 109 aa8.37□□□□□ -1.07
CECR3-201ENST00000428828 Q1RN00 199 aa8.37□□□□□ -1.07
CECR3-201ENST00000428828 ZNF876PQ49A33 203 aa8.37□□□□□ -1.07
CECR3-201ENST00000428828 SPANXN1Q5VSR9 72 aa8.37□□□□□ -1.07
CECR3-201ENST00000428828 MRPL53Q96EL3 112 aaKnown RBP8.37□□□□□ -1.07
CECR3-201ENST00000428828 ZNF256Q9Y2P7 627 aaPredicted RBP8.37□□□□□ -1.07
CECR3-201ENST00000428828 NOTCH3Q9UM47 2321 aa8.36□□□□□ -1.07
CECR3-201ENST00000428828 F5H768 121 aa8.36□□□□□ -1.07
CECR3-201ENST00000428828 MED14OSP0DP75 135 aa8.36□□□□□ -1.07
CECR3-201ENST00000428828 KRTAP21-3Q3LHN1 58 aa8.36□□□□□ -1.07
CECR3-201ENST00000428828 MUSTN1Q8IVN3 82 aa8.36□□□□□ -1.07
CECR3-201ENST00000428828 TMEM61Q8N0U2 210 aa8.36□□□□□ -1.07
CECR3-201ENST00000428828 CMYA5Q8N3K9 4069 aa8.35□□□□□ -1.07
CECR3-201ENST00000428828 DEFB114Q30KQ6 69 aa8.35□□□□□ -1.07
CECR3-201ENST00000428828 C9orf66Q5T8R8 295 aa8.35□□□□□ -1.07
CECR3-201ENST00000428828 KIR2DL5BQ8NHK3 375 aa8.35□□□□□ -1.07
CECR3-201ENST00000428828 DPH3P1Q9H4G8 78 aa8.35□□□□□ -1.07
CECR3-201ENST00000428828 SMAD5-AS1Q9Y6J3 95 aa8.35□□□□□ -1.07
CECR3-201ENST00000428828 ICOSQ9Y6W8 199 aa8.35□□□□□ -1.07
CECR3-201ENST00000428828 TSHBP01222 138 aa8.35□□□□□ -1.07
CECR3-201ENST00000428828 TRACP01848 142 aa8.35□□□□□ -1.07
CECR3-201ENST00000428828 CEMP1Q6PRD7 247 aaPredicted RBP8.35□□□□□ -1.07
CECR3-201ENST00000428828 DPH3Q96FX2 82 aa8.35□□□□□ -1.07
CECR3-201ENST00000428828 EDA2RQ9HAV5 297 aa8.35□□□□□ -1.07
CECR3-201ENST00000428828 WFDC9Q8NEX5 89 aa8.34□□□□□ -1.07
CECR3-201ENST00000428828 C11orf21Q9P2W6 132 aa8.34□□□□□ -1.07
CECR3-201ENST00000428828 LENEPQ9Y5L5 61 aa8.34□□□□□ -1.07
CECR3-201ENST00000428828 SORL1Q92673 2214 aa8.33□□□□□ -1.08
CECR3-201ENST00000428828 IGLV1-51P01701 117 aa8.33□□□□□ -1.08
CECR3-201ENST00000428828 PRB4P10163 310 aaPredicted RBP8.33□□□□□ -1.08
CECR3-201ENST00000428828 OXLD1Q5BKU9 147 aa8.33□□□□□ -1.08
CECR3-201ENST00000428828 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.33□□□□□ -1.08
CECR3-201ENST00000428828 C14orf178Q8N769 122 aaPredicted RBP8.33□□□□□ -1.08
CECR3-201ENST00000428828 DCANP1Q8TF63 244 aa8.33□□□□□ -1.08
CECR3-201ENST00000428828 ZNF22P17026 224 aaPredicted RBP8.33□□□□□ -1.08
CECR3-201ENST00000428828 IGFL4Q6B9Z1 124 aa8.33□□□□□ -1.08
CECR3-201ENST00000428828 DAND5Q8N907 189 aa8.33□□□□□ -1.08
CECR3-201ENST00000428828 RNF182Q8N6D2 247 aa8.31□□□□□ -1.08
CECR3-201ENST00000428828 C16orf92Q96LL3 132 aa8.31□□□□□ -1.08
CECR3-201ENST00000428828 KLK5Q9Y337 293 aaPredicted RBP8.31□□□□□ -1.08
CECR3-201ENST00000428828 F8WDY8 70 aa8.31□□□□□ -1.08
CECR3-201ENST00000428828 H7C2G1 150 aa8.31□□□□□ -1.08
CECR3-201ENST00000428828 C9orf47Q6ZRZ4 202 aa8.31□□□□□ -1.08
CECR3-201ENST00000428828 TP53TG1Q9Y2A0 90 aa8.3□□□□□ -1.08
CECR3-201ENST00000428828 K7EQG2 157 aa8.29□□□□□ -1.08
CECR3-201ENST00000428828 SOCS3O14543 225 aa8.29□□□□□ -1.08
CECR3-201ENST00000428828 SMCR5Q8TEV8 140 aa8.29□□□□□ -1.08
CECR3-201ENST00000428828 DNHD1Q96M86 4753 aa8.29□□□□□ -1.08
CECR3-201ENST00000428828 A0A0J9YXY3 114 aa8.29□□□□□ -1.08
CECR3-201ENST00000428828 NDUFC2-KCTD14E9PQ53 114 aa8.29□□□□□ -1.08
CECR3-201ENST00000428828 VCYO14598 125 aa8.29□□□□□ -1.08
CECR3-201ENST00000428828 POLR2KP53803 58 aaKnown RBP8.29□□□□□ -1.08
CECR3-201ENST00000428828 DEFB1P60022 68 aa8.29□□□□□ -1.08
CECR3-201ENST00000428828 Q5XG85 94 aa8.29□□□□□ -1.08
CECR3-201ENST00000428828 RPL39LQ96EH5 51 aaKnown RBP8.29□□□□□ -1.08
CECR3-201ENST00000428828 C20orf173Q96LM9 149 aa8.29□□□□□ -1.08
CECR3-201ENST00000428828 LITAFQ99732 161 aa8.29□□□□□ -1.08
CECR3-201ENST00000428828 PRAC2D3DTV9 90 aa8.28□□□□□ -1.08
CECR3-201ENST00000428828 NXPH4O95158 308 aa8.28□□□□□ -1.08
CECR3-201ENST00000428828 RPL18AQ02543 176 aaKnown RBP8.28□□□□□ -1.08
CECR3-201ENST00000428828 FAM222AQ5U5X8 452 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms