RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 IGIPA6NJ69 53 aa6.12□□□□□ -1.43
HDAC1-202ENST00000428704 F5H697 171 aa6.12□□□□□ -1.43
HDAC1-202ENST00000428704 F8VRH5 84 aa6.12□□□□□ -1.43
HDAC1-202ENST00000428704 PLNP26678 52 aa6.12□□□□□ -1.43
HDAC1-202ENST00000428704 ZFP2Q6ZN57 461 aa6.12□□□□□ -1.43
HDAC1-202ENST00000428704 TMEM141Q96I45 108 aa6.12□□□□□ -1.43
HDAC1-202ENST00000428704 SCGB3A1Q96QR1 104 aa6.12□□□□□ -1.43
HDAC1-202ENST00000428704 TIMM17AQ99595 171 aa6.12□□□□□ -1.43
HDAC1-202ENST00000428704 CYSLTR1Q9Y271 337 aa6.12□□□□□ -1.43
HDAC1-202ENST00000428704 EPM2AB3EWF7 344 aa6.11□□□□□ -1.43
HDAC1-202ENST00000428704 RHODO00212 210 aa6.11□□□□□ -1.43
HDAC1-202ENST00000428704 NPSP0C0P6 89 aa6.11□□□□□ -1.43
HDAC1-202ENST00000428704 PAPPA-AS1Q5QFB9 102 aa6.11□□□□□ -1.43
HDAC1-202ENST00000428704 C2orf91Q6ZV80 131 aa6.11□□□□□ -1.43
HDAC1-202ENST00000428704 C1orf158Q8N1D5 194 aa6.11□□□□□ -1.43
HDAC1-202ENST00000428704 STPG4Q8N801 248 aa6.11□□□□□ -1.43
HDAC1-202ENST00000428704 DNAJC30Q96LL9 226 aa6.11□□□□□ -1.43
HDAC1-202ENST00000428704 LINC01587Q99440 93 aa6.11□□□□□ -1.43
HDAC1-202ENST00000428704 XCL2Q9UBD3 114 aa6.11□□□□□ -1.43
HDAC1-202ENST00000428704 FAT1Q14517 4588 aa6.11□□□□□ -1.43
HDAC1-202ENST00000428704 SRRM2Q9UQ35 2752 aaKnown RBP6.1□□□□□ -1.43
HDAC1-202ENST00000428704 I3L3M4 83 aa6.1□□□□□ -1.43
HDAC1-202ENST00000428704 RS1O15537 224 aa6.1□□□□□ -1.43
HDAC1-202ENST00000428704 MIFP14174 115 aa6.1□□□□□ -1.43
HDAC1-202ENST00000428704 ZNF56Q15929 161 aa6.1□□□□□ -1.43
HDAC1-202ENST00000428704 FAM74A4Q5TZK3 123 aa6.1□□□□□ -1.43
HDAC1-202ENST00000428704 BAALCQ8WXS3 180 aa6.1□□□□□ -1.43
HDAC1-202ENST00000428704 C1QTNF4Q9BXJ3 329 aa6.1□□□□□ -1.43
HDAC1-202ENST00000428704 KRTAP9-9Q9BYP9 154 aa6.1□□□□□ -1.43
HDAC1-202ENST00000428704 KRTAP9-4Q9BYQ2 154 aa6.1□□□□□ -1.43
HDAC1-202ENST00000428704 MRPL35Q9NZE8 188 aaKnown RBP6.1□□□□□ -1.43
HDAC1-202ENST00000428704 HIGD1BQ9P298 99 aa6.1□□□□□ -1.43
HDAC1-202ENST00000428704 CELA1Q9UNI1 258 aa6.1□□□□□ -1.43
HDAC1-202ENST00000428704 C9orf118A6NHY6 69 aa6.09□□□□□ -1.43
HDAC1-202ENST00000428704 CIDEAO60543 219 aa6.09□□□□□ -1.43
HDAC1-202ENST00000428704 IGHV3-53P01767 116 aa6.09□□□□□ -1.43
HDAC1-202ENST00000428704 CRYBA4P53673 196 aa6.09□□□□□ -1.43
HDAC1-202ENST00000428704 GAGE1Q13065 139 aa6.09□□□□□ -1.43
HDAC1-202ENST00000428704 BVES-AS1Q5T3Y7 98 aa6.09□□□□□ -1.43
HDAC1-202ENST00000428704 ZC2HC1BQ5TFG8 222 aa6.09□□□□□ -1.43
HDAC1-202ENST00000428704 CFAP126Q5VTH2 177 aa6.09□□□□□ -1.43
HDAC1-202ENST00000428704 CHTOPQ9Y3Y2 248 aaKnown RBP6.09□□□□□ -1.43
HDAC1-202ENST00000428704 TSHBP01222 138 aa6.08□□□□□ -1.44
HDAC1-202ENST00000428704 P0DMU3 169 aa6.08□□□□□ -1.44
HDAC1-202ENST00000428704 FAM231AP0DMU4 169 aa6.08□□□□□ -1.44
HDAC1-202ENST00000428704 FAM231CP0DMU5 169 aa6.08□□□□□ -1.44
HDAC1-202ENST00000428704 HINT1P49773 126 aaPredicted RBP6.08□□□□□ -1.44
HDAC1-202ENST00000428704 SEC11AP67812 179 aa6.08□□□□□ -1.44
HDAC1-202ENST00000428704 DAZ2Q13117 558 aaKnown RBP6.08□□□□□ -1.44
HDAC1-202ENST00000428704 PMVKQ15126 192 aa6.08□□□□□ -1.44
HDAC1-202ENST00000428704 MPV17L2Q567V2 206 aa6.08□□□□□ -1.44
HDAC1-202ENST00000428704 Q6ZTC4 211 aa6.08□□□□□ -1.44
HDAC1-202ENST00000428704 C20orf203Q8NBC4 194 aa6.08□□□□□ -1.44
HDAC1-202ENST00000428704 RNASE8Q8TDE3 154 aaKnown RBP6.08□□□□□ -1.44
HDAC1-202ENST00000428704 TMEM263Q8WUH6 116 aaKnown RBP6.08□□□□□ -1.44
HDAC1-202ENST00000428704 PYGO1Q9Y3Y4 419 aa6.08□□□□□ -1.44
HDAC1-202ENST00000428704 HSD52Q0P140 79 aa6.07□□□□□ -1.44
HDAC1-202ENST00000428704 TMEM97Q5BJF2 176 aa6.07□□□□□ -1.44
HDAC1-202ENST00000428704 ORAOV1Q8WV07 137 aa6.07□□□□□ -1.44
HDAC1-202ENST00000428704 IGHV3OR16-12A0A075B7B8 117 aa6.06□□□□□ -1.44
HDAC1-202ENST00000428704 IGKV2D-26A0A0A0MRZ7 120 aa6.06□□□□□ -1.44
HDAC1-202ENST00000428704 E9PLD3 99 aa6.06□□□□□ -1.44
HDAC1-202ENST00000428704 HTN1P15515 57 aa6.06□□□□□ -1.44
HDAC1-202ENST00000428704 AZU1P20160 251 aa6.06□□□□□ -1.44
HDAC1-202ENST00000428704 BATFQ16520 125 aa6.06□□□□□ -1.44
HDAC1-202ENST00000428704 TAL2Q16559 108 aa6.06□□□□□ -1.44
HDAC1-202ENST00000428704 C12orf74Q32Q52 190 aa6.06□□□□□ -1.44
HDAC1-202ENST00000428704 NEGR1Q7Z3B1 354 aa6.06□□□□□ -1.44
HDAC1-202ENST00000428704 PCP2Q8IVA1 136 aa6.06□□□□□ -1.44
HDAC1-202ENST00000428704 LINC00469Q8N7U9 141 aa6.06□□□□□ -1.44
HDAC1-202ENST00000428704 TMEM208Q9BTX3 173 aa6.06□□□□□ -1.44
HDAC1-202ENST00000428704 CST9LQ9H4G1 147 aa6.06□□□□□ -1.44
HDAC1-202ENST00000428704 TNFRSF18Q9Y5U5 241 aa6.06□□□□□ -1.44
HDAC1-202ENST00000428704 IGLV4-69A0A075B6H9 119 aa6.05□□□□□ -1.44
HDAC1-202ENST00000428704 TRBV10-1A0A0K0K1A3 114 aa6.05□□□□□ -1.44
HDAC1-202ENST00000428704 NMUP48645 174 aa6.05□□□□□ -1.44
HDAC1-202ENST00000428704 NFE4Q86UQ8 179 aa6.05□□□□□ -1.44
HDAC1-202ENST00000428704 C16orf74Q96GX8 76 aa6.05□□□□□ -1.44
HDAC1-202ENST00000428704 TRBV25-1A0A075B6N4 114 aa6.04□□□□□ -1.44
HDAC1-202ENST00000428704 TRAV10A0A0B4J240 114 aa6.04□□□□□ -1.44
HDAC1-202ENST00000428704 TRAV4A0A0B4J268 109 aa6.04□□□□□ -1.44
HDAC1-202ENST00000428704 SMIM9A6NGZ8 99 aa6.04□□□□□ -1.44
HDAC1-202ENST00000428704 C11orf86A6NJI1 115 aa6.04□□□□□ -1.44
HDAC1-202ENST00000428704 PRM2P04554 102 aa6.04□□□□□ -1.44
HDAC1-202ENST00000428704 ZNF25P17030 456 aaPredicted RBP6.04□□□□□ -1.44
HDAC1-202ENST00000428704 RPL39P62891 51 aaKnown RBP6.04□□□□□ -1.44
HDAC1-202ENST00000428704 C1orf134Q5TEV5 83 aa6.04□□□□□ -1.44
HDAC1-202ENST00000428704 Q6ZSN1 163 aa6.04□□□□□ -1.44
HDAC1-202ENST00000428704 TP73-AS1Q9UF72 201 aa6.04□□□□□ -1.44
HDAC1-202ENST00000428704 COX11Q9Y6N1 276 aa6.04□□□□□ -1.44
HDAC1-202ENST00000428704 PLAC8L1A1L4L8 177 aa6.03□□□□□ -1.44
HDAC1-202ENST00000428704 TAX1BP3O14907 124 aa6.03□□□□□ -1.44
HDAC1-202ENST00000428704 EMP1P54849 157 aa6.03□□□□□ -1.44
HDAC1-202ENST00000428704 FAM222AQ5U5X8 452 aa6.03□□□□□ -1.44
HDAC1-202ENST00000428704 Q6ZR54 194 aa6.03□□□□□ -1.44
HDAC1-202ENST00000428704 OR4C5Q8NGB2 326 aa6.03□□□□□ -1.44
HDAC1-202ENST00000428704 AMELXQ99217 191 aa6.03□□□□□ -1.44
HDAC1-202ENST00000428704 CHCHD7Q9BUK0 85 aa6.03□□□□□ -1.44
HDAC1-202ENST00000428704 TIMM21Q9BVV7 248 aa6.03□□□□□ -1.44
HDAC1-202ENST00000428704 TM2D2Q9BX73 214 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms