RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 C11orf71Q6IPW1 123 aa6.68□□□□□ -1.34
CTNND1-208ENST00000428599 SCXQ7RTU7 201 aa6.68□□□□□ -1.34
CTNND1-208ENST00000428599 Q8N976 141 aa6.68□□□□□ -1.34
CTNND1-208ENST00000428599 PLAC8L1A1L4L8 177 aa6.68□□□□□ -1.34
CTNND1-208ENST00000428599 IGKV2-28A0A075B6P5 120 aa6.68□□□□□ -1.34
CTNND1-208ENST00000428599 IGKV2D-28P01615 120 aa6.68□□□□□ -1.34
CTNND1-208ENST00000428599 CCKP06307 115 aa6.68□□□□□ -1.34
CTNND1-208ENST00000428599 KPRPQ5T749 579 aaPredicted RBP6.68□□□□□ -1.34
CTNND1-208ENST00000428599 Q8N9L7 120 aa6.68□□□□□ -1.34
CTNND1-208ENST00000428599 A0A0J9YWU9 116 aa6.68□□□□□ -1.34
CTNND1-208ENST00000428599 M0R378 163 aa6.68□□□□□ -1.34
CTNND1-208ENST00000428599 IGLV9-49A0A0B4J1Y8 123 aa6.67□□□□□ -1.34
CTNND1-208ENST00000428599 CFAP126Q5VTH2 177 aa6.67□□□□□ -1.34
CTNND1-208ENST00000428599 BBC3Q96PG8 261 aaPredicted RBP6.67□□□□□ -1.34
CTNND1-208ENST00000428599 FAM240AA0A1B0GVK7 77 aa6.67□□□□□ -1.34
CTNND1-208ENST00000428599 C19orf71A6NCJ1 209 aa6.67□□□□□ -1.34
CTNND1-208ENST00000428599 DCANP1Q8TF63 244 aa6.66□□□□□ -1.34
CTNND1-208ENST00000428599 LINC00574Q9H8X3 128 aa6.66□□□□□ -1.34
CTNND1-208ENST00000428599 COA6Q5JTJ3 125 aaKnown RBP6.66□□□□□ -1.34
CTNND1-208ENST00000428599 LELP1Q5T871 98 aa6.66□□□□□ -1.34
CTNND1-208ENST00000428599 ATRXP46100 2492 aa6.66□□□□□ -1.34
CTNND1-208ENST00000428599 LRP4O75096 1905 aa6.66□□□□□ -1.34
CTNND1-208ENST00000428599 GOLGB1Q14789 3259 aaKnown RBP6.66□□□□□ -1.34
CTNND1-208ENST00000428599 ENHOQ6UWT2 76 aa6.66□□□□□ -1.34
CTNND1-208ENST00000428599 CDKN2A-AS1Q9UH64 79 aa6.66□□□□□ -1.34
CTNND1-208ENST00000428599 FSTL3O95633 263 aa6.66□□□□□ -1.34
CTNND1-208ENST00000428599 SLPIP03973 132 aa6.66□□□□□ -1.34
CTNND1-208ENST00000428599 PLA2G2AP14555 144 aa6.66□□□□□ -1.34
CTNND1-208ENST00000428599 ARHGAP21Q5T5U3 1957 aa6.65□□□□□ -1.34
CTNND1-208ENST00000428599 CD164L2Q6UWJ8 174 aa6.65□□□□□ -1.34
CTNND1-208ENST00000428599 C20orf197Q8N268 126 aa6.65□□□□□ -1.34
CTNND1-208ENST00000428599 TNRC6BQ9UPQ9 1833 aaKnown RBP6.65□□□□□ -1.34
CTNND1-208ENST00000428599 FAM236DA0A1B0GTK5 79 aa6.65□□□□□ -1.34
CTNND1-208ENST00000428599 C3orf84H3BNL1 204 aa6.65□□□□□ -1.34
CTNND1-208ENST00000428599 FAM236CP0DP71 79 aa6.65□□□□□ -1.34
CTNND1-208ENST00000428599 Q6ZVQ6 151 aa6.65□□□□□ -1.35
CTNND1-208ENST00000428599 MLST8Q9BVC4 326 aa6.65□□□□□ -1.35
CTNND1-208ENST00000428599 SDIM1Q6ZPB5 146 aa6.65□□□□□ -1.35
CTNND1-208ENST00000428599 TMEM223A0PJW6 202 aa6.64□□□□□ -1.35
CTNND1-208ENST00000428599 ZNF80P51504 273 aaPredicted RBP6.64□□□□□ -1.35
CTNND1-208ENST00000428599 CDSNQ15517 529 aa6.64□□□□□ -1.35
CTNND1-208ENST00000428599 C6orf99Q4VX62 202 aa6.64□□□□□ -1.35
CTNND1-208ENST00000428599 LINC00308Q8TCZ7 52 aa6.64□□□□□ -1.35
CTNND1-208ENST00000428599 PIEZO2Q9H5I5 2752 aa6.64□□□□□ -1.35
CTNND1-208ENST00000428599 NUPR1O60356 82 aa6.64□□□□□ -1.35
CTNND1-208ENST00000428599 RPL28P46779 137 aaKnown RBP6.64□□□□□ -1.35
CTNND1-208ENST00000428599 WFDC13Q8IUB5 93 aa6.64□□□□□ -1.35
CTNND1-208ENST00000428599 PSMG3-AS1Q96PY0 264 aa6.64□□□□□ -1.35
CTNND1-208ENST00000428599 SONP18583 2426 aaKnown RBP6.64□□□□□ -1.35
CTNND1-208ENST00000428599 NDUFC2-KCTD14E9PQ53 114 aa6.64□□□□□ -1.35
CTNND1-208ENST00000428599 Q6ZPA2 131 aa6.64□□□□□ -1.35
CTNND1-208ENST00000428599 C20orf173Q96LM9 149 aa6.64□□□□□ -1.35
CTNND1-208ENST00000428599 IGLV4-3A0A075B6K6 122 aa6.64□□□□□ -1.35
CTNND1-208ENST00000428599 PIK3CD-AS1Q5SR53 167 aa6.64□□□□□ -1.35
CTNND1-208ENST00000428599 CRIP3Q6Q6R5 217 aa6.64□□□□□ -1.35
CTNND1-208ENST00000428599 RBX1P62877 108 aa6.63□□□□□ -1.35
CTNND1-208ENST00000428599 C1orf229Q6ZS94 237 aaPredicted RBP6.63□□□□□ -1.35
CTNND1-208ENST00000428599 CLUHP3Q96NS8 147 aa6.63□□□□□ -1.35
CTNND1-208ENST00000428599 C10orf25Q5T742 122 aa6.63□□□□□ -1.35
CTNND1-208ENST00000428599 LINC01006Q8NI28 216 aa6.63□□□□□ -1.35
CTNND1-208ENST00000428599 ZNF22P17026 224 aaPredicted RBP6.62□□□□□ -1.35
CTNND1-208ENST00000428599 RPL37AP8A6NKH3 93 aa6.62□□□□□ -1.35
CTNND1-208ENST00000428599 PRYO14603 147 aa6.62□□□□□ -1.35
CTNND1-208ENST00000428599 ATP5EP56381 51 aaPredicted RBP6.62□□□□□ -1.35
CTNND1-208ENST00000428599 ZNF702PQ9H963 129 aa6.62□□□□□ -1.35
CTNND1-208ENST00000428599 NANOS2P60321 138 aaKnown RBP6.62□□□□□ -1.35
CTNND1-208ENST00000428599 PTH2Q96A98 100 aa6.62□□□□□ -1.35
CTNND1-208ENST00000428599 IGLC6P0CF74 106 aa6.62□□□□□ -1.35
CTNND1-208ENST00000428599 BRWD1-AS2P59051 145 aa6.62□□□□□ -1.35
CTNND1-208ENST00000428599 IGLV5-52A0A0A0MRZ9 124 aa6.61□□□□□ -1.35
CTNND1-208ENST00000428599 SERP2Q8N6R1 65 aa6.61□□□□□ -1.35
CTNND1-208ENST00000428599 PLA2G2EQ9NZK7 142 aa6.61□□□□□ -1.35
CTNND1-208ENST00000428599 M0QY20 66 aa6.61□□□□□ -1.35
CTNND1-208ENST00000428599 P0C879 139 aa6.61□□□□□ -1.35
CTNND1-208ENST00000428599 IGHV4-30-4P0DP06 118 aa6.61□□□□□ -1.35
CTNND1-208ENST00000428599 HIVEP3Q5T1R4 2406 aa6.61□□□□□ -1.35
CTNND1-208ENST00000428599 NAV2Q8IVL1 2488 aa6.61□□□□□ -1.35
CTNND1-208ENST00000428599 CCDC168Q8NDH2 2452 aa6.61□□□□□ -1.35
CTNND1-208ENST00000428599 FAM19A3Q7Z5A8 133 aa6.61□□□□□ -1.35
CTNND1-208ENST00000428599 UQCRQO14949 82 aa6.6□□□□□ -1.35
CTNND1-208ENST00000428599 TNCP24821 2201 aa6.6□□□□□ -1.35
CTNND1-208ENST00000428599 NDUFC1O43677 76 aa6.6□□□□□ -1.35
CTNND1-208ENST00000428599 COX17Q14061 63 aa6.6□□□□□ -1.35
CTNND1-208ENST00000428599 RETNQ9HD89 108 aa6.6□□□□□ -1.35
CTNND1-208ENST00000428599 EBI3Q14213 229 aa6.6□□□□□ -1.35
CTNND1-208ENST00000428599 TRBV6-5A0A0K0K1A5 114 aa6.6□□□□□ -1.35
CTNND1-208ENST00000428599 A0A1B0GXF2 115 aa6.6□□□□□ -1.35
CTNND1-208ENST00000428599 A6NED7 52 aa6.6□□□□□ -1.35
CTNND1-208ENST00000428599 Q6ZQY7 126 aa6.6□□□□□ -1.35
CTNND1-208ENST00000428599 TDRG1Q3Y452 100 aa6.59□□□□□ -1.35
CTNND1-208ENST00000428599 MUC7Q8TAX7 377 aa6.59□□□□□ -1.35
CTNND1-208ENST00000428599 COL5A1P20908 1838 aaPredicted RBP6.59□□□□□ -1.35
CTNND1-208ENST00000428599 LINC00959A0A1B0GUT2 108 aa6.59□□□□□ -1.35
CTNND1-208ENST00000428599 C10orf99Q6UWK7 81 aa6.59□□□□□ -1.35
CTNND1-208ENST00000428599 PYGO1Q9Y3Y4 419 aa6.59□□□□□ -1.35
CTNND1-208ENST00000428599 G3V4G9 280 aa6.59□□□□□ -1.36
CTNND1-208ENST00000428599 ZNF73O43830 326 aaPredicted RBP6.59□□□□□ -1.36
CTNND1-208ENST00000428599 CIRBP-AS1Q8TBR5 109 aa6.59□□□□□ -1.36
CTNND1-208ENST00000428599 LINC00526Q96FQ7 95 aa6.58□□□□□ -1.36
CTNND1-208ENST00000428599 M0QXV9 152 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms