RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 RIGQ13278 110 aa6.14□□□□□ -1.43
TRIM39-208ENST00000428555 AMN1Q8IY45 258 aa6.14□□□□□ -1.43
TRIM39-208ENST00000428555 CHAC1Q9BUX1 264 aa6.14□□□□□ -1.43
TRIM39-208ENST00000428555 ST20Q9HBF5 79 aa6.14□□□□□ -1.43
TRIM39-208ENST00000428555 NAT8Q9UHE5 227 aa6.14□□□□□ -1.43
TRIM39-208ENST00000428555 SMKR1H3BMG3 65 aa6.13□□□□□ -1.43
TRIM39-208ENST00000428555 EIF4EBP3O60516 100 aaPredicted RBP6.13□□□□□ -1.43
TRIM39-208ENST00000428555 APCSP02743 223 aa6.13□□□□□ -1.43
TRIM39-208ENST00000428555 FGF6P10767 208 aa6.13□□□□□ -1.43
TRIM39-208ENST00000428555 RPS10P46783 165 aaKnown RBP6.13□□□□□ -1.43
TRIM39-208ENST00000428555 POLR2KP53803 58 aaKnown RBP6.13□□□□□ -1.43
TRIM39-208ENST00000428555 AMMECR1LQ6DCA0 310 aa6.13□□□□□ -1.43
TRIM39-208ENST00000428555 RNASEKQ6P5S7 137 aaKnown RBP6.13□□□□□ -1.43
TRIM39-208ENST00000428555 SCXQ7RTU7 201 aa6.13□□□□□ -1.43
TRIM39-208ENST00000428555 CIRBP-AS1Q8TBR5 109 aa6.13□□□□□ -1.43
TRIM39-208ENST00000428555 SMDT1Q9H4I9 107 aa6.13□□□□□ -1.43
TRIM39-208ENST00000428555 NAT8BQ9UHF3 227 aa6.13□□□□□ -1.43
TRIM39-208ENST00000428555 SMIM27A0A1W2PRY6 76 aa6.12□□□□□ -1.43
TRIM39-208ENST00000428555 GAGE12HA6NDE8 117 aa6.12□□□□□ -1.43
TRIM39-208ENST00000428555 TSHBP01222 138 aa6.12□□□□□ -1.43
TRIM39-208ENST00000428555 C9orf163Q8N9P6 203 aa6.12□□□□□ -1.43
TRIM39-208ENST00000428555 MRAP2Q96G30 205 aa6.12□□□□□ -1.43
TRIM39-208ENST00000428555 TMEM242Q9NWH2 141 aa6.12□□□□□ -1.43
TRIM39-208ENST00000428555 DMBT1Q9UGM3 2413 aaPredicted RBP6.12□□□□□ -1.43
TRIM39-208ENST00000428555 hDV102S1A0JD36 115 aa6.11□□□□□ -1.43
TRIM39-208ENST00000428555 H7C423 109 aa6.11□□□□□ -1.43
TRIM39-208ENST00000428555 VCYO14598 125 aa6.11□□□□□ -1.43
TRIM39-208ENST00000428555 SLPIP03973 132 aa6.11□□□□□ -1.43
TRIM39-208ENST00000428555 ESDP10768 282 aa6.11□□□□□ -1.43
TRIM39-208ENST00000428555 SDIM1Q6ZPB5 146 aa6.11□□□□□ -1.43
TRIM39-208ENST00000428555 GEMIN7Q9H840 131 aaKnown RBP6.11□□□□□ -1.43
TRIM39-208ENST00000428555 TRBV27A0A0K0K1C4 114 aa6.1□□□□□ -1.43
TRIM39-208ENST00000428555 PLA2G1BP04054 148 aaKnown RBP6.1□□□□□ -1.43
TRIM39-208ENST00000428555 MRPL51Q4U2R6 128 aaKnown RBP6.1□□□□□ -1.43
TRIM39-208ENST00000428555 FAM104BQ5XKR9 115 aa6.1□□□□□ -1.43
TRIM39-208ENST00000428555 NRACQ8N912 160 aa6.1□□□□□ -1.43
TRIM39-208ENST00000428555 CHCHD10Q8WYQ3 142 aaPredicted RBP6.1□□□□□ -1.43
TRIM39-208ENST00000428555 TMEM101Q96IK0 257 aa6.1□□□□□ -1.43
TRIM39-208ENST00000428555 BTF3L4Q96K17 158 aa6.1□□□□□ -1.43
TRIM39-208ENST00000428555 PCP4L1A6NKN8 68 aa6.09□□□□□ -1.43
TRIM39-208ENST00000428555 PANO1I0J062 215 aa6.09□□□□□ -1.43
TRIM39-208ENST00000428555 GHRHP01286 108 aa6.09□□□□□ -1.43
TRIM39-208ENST00000428555 CNBPP62633 177 aaKnown RBP6.09□□□□□ -1.43
TRIM39-208ENST00000428555 OR5A1Q8NGJ0 315 aa6.09□□□□□ -1.43
TRIM39-208ENST00000428555 AP5S1Q9NUS5 200 aa6.09□□□□□ -1.43
TRIM39-208ENST00000428555 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.09□□□□□ -1.43
TRIM39-208ENST00000428555 PPP1R17O96001 155 aa6.08□□□□□ -1.44
TRIM39-208ENST00000428555 ZNF25P17030 456 aaPredicted RBP6.08□□□□□ -1.44
TRIM39-208ENST00000428555 FCER1GP30273 86 aa6.08□□□□□ -1.44
TRIM39-208ENST00000428555 CKS2P33552 79 aa6.08□□□□□ -1.44
TRIM39-208ENST00000428555 SUMO2P61956 95 aaKnown RBP6.08□□□□□ -1.44
TRIM39-208ENST00000428555 MRPL54Q6P161 138 aaKnown RBP6.08□□□□□ -1.44
TRIM39-208ENST00000428555 C15orf56Q8N910 161 aa6.08□□□□□ -1.44
TRIM39-208ENST00000428555 CDC42SE2Q9NRR3 84 aa6.08□□□□□ -1.44
TRIM39-208ENST00000428555 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.07□□□□□ -1.44
TRIM39-208ENST00000428555 LINC00959A0A1B0GUT2 108 aa6.07□□□□□ -1.44
TRIM39-208ENST00000428555 A0A1B0GW15 77 aa6.07□□□□□ -1.44
TRIM39-208ENST00000428555 C7orf77A4D0Y5 90 aa6.07□□□□□ -1.44
TRIM39-208ENST00000428555 LINC00862A6NCI5 91 aa6.07□□□□□ -1.44
TRIM39-208ENST00000428555 CCL25O15444 150 aa6.07□□□□□ -1.44
TRIM39-208ENST00000428555 XCL1P47992 114 aa6.07□□□□□ -1.44
TRIM39-208ENST00000428555 FOXI1Q12951 378 aa6.07□□□□□ -1.44
TRIM39-208ENST00000428555 HIGD2BQ4VC39 106 aa6.07□□□□□ -1.44
TRIM39-208ENST00000428555 MRPL52Q86TS9 123 aaKnown RBP6.07□□□□□ -1.44
TRIM39-208ENST00000428555 ZNF664Q8N3J9 261 aa6.07□□□□□ -1.44
TRIM39-208ENST00000428555 DPH3Q96FX2 82 aa6.07□□□□□ -1.44
TRIM39-208ENST00000428555 TRBV24-1A0A075B6N3 115 aa6.06□□□□□ -1.44
TRIM39-208ENST00000428555 IGHV3-64A0A075B6Q5 118 aa6.06□□□□□ -1.44
TRIM39-208ENST00000428555 A0A1B0GXF2 115 aa6.06□□□□□ -1.44
TRIM39-208ENST00000428555 KRTAP10-4P60372 401 aaPredicted RBP6.06□□□□□ -1.44
TRIM39-208ENST00000428555 HBBP68871 147 aa6.06□□□□□ -1.44
TRIM39-208ENST00000428555 KIR2DL4Q99706 377 aa6.06□□□□□ -1.44
TRIM39-208ENST00000428555 C20orf78Q9BR46 151 aa6.06□□□□□ -1.44
TRIM39-208ENST00000428555 LRP1Q07954 4544 aaKnown RBP6.06□□□□□ -1.44
TRIM39-208ENST00000428555 D6R8Y8 96 aa6.05□□□□□ -1.44
TRIM39-208ENST00000428555 F8W036 122 aa6.05□□□□□ -1.44
TRIM39-208ENST00000428555 PPP1R2P9O14990 202 aa6.05□□□□□ -1.44
TRIM39-208ENST00000428555 S100A8P05109 93 aa6.05□□□□□ -1.44
TRIM39-208ENST00000428555 SS18Q15532 418 aa6.05□□□□□ -1.44
TRIM39-208ENST00000428555 GVQW2A0A096LPI5 108 aaPredicted RBP6.04□□□□□ -1.44
TRIM39-208ENST00000428555 NPYP01303 97 aa6.04□□□□□ -1.44
TRIM39-208ENST00000428555 CHTF8P0CG12 524 aa6.04□□□□□ -1.44
TRIM39-208ENST00000428555 COX6A2Q02221 97 aa6.04□□□□□ -1.44
TRIM39-208ENST00000428555 RNASE13Q5GAN3 156 aaKnown RBP6.04□□□□□ -1.44
TRIM39-208ENST00000428555 CD164L2Q6UWJ8 174 aa6.04□□□□□ -1.44
TRIM39-208ENST00000428555 PRSS3P2Q8NHM4 247 aa6.04□□□□□ -1.44
TRIM39-208ENST00000428555 LINC00526Q96FQ7 95 aa6.04□□□□□ -1.44
TRIM39-208ENST00000428555 UBE2D4Q9Y2X8 147 aa6.04□□□□□ -1.44
TRIM39-208ENST00000428555 CSDC2Q9Y534 153 aaKnown RBP6.04□□□□□ -1.44
TRIM39-208ENST00000428555 C1orf196B1AJZ1 125 aa6.03□□□□□ -1.44
TRIM39-208ENST00000428555 MT-ND4LP03901 98 aa6.03□□□□□ -1.44
TRIM39-208ENST00000428555 G0S2P27469 103 aa6.03□□□□□ -1.44
TRIM39-208ENST00000428555 RPL39P62891 51 aaKnown RBP6.03□□□□□ -1.44
TRIM39-208ENST00000428555 RPL32P62910 135 aaKnown RBP6.03□□□□□ -1.44
TRIM39-208ENST00000428555 CIRBPQ14011 172 aaKnown RBP6.03□□□□□ -1.44
TRIM39-208ENST00000428555 TMEM136Q6ZRR5 245 aa6.03□□□□□ -1.44
TRIM39-208ENST00000428555 CTDSP1Q9GZU7 261 aa6.03□□□□□ -1.44
TRIM39-208ENST00000428555 FAT3Q8TDW7 4589 aa6.03□□□□□ -1.44
TRIM39-208ENST00000428555 A0A087WYN8 130 aa6.02□□□□□ -1.45
TRIM39-208ENST00000428555 TRAV13-1A0A0B4J241 112 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms