RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 SEC11CQ9BY50 192 aa10.85□□□□□ -0.67
VRK2-204ENST00000428021 GAGE12HA6NDE8 117 aa10.84□□□□□ -0.67
VRK2-204ENST00000428021 PHOX2AO14813 284 aa10.84□□□□□ -0.67
VRK2-204ENST00000428021 OR5A1Q8NGJ0 315 aa10.84□□□□□ -0.67
VRK2-204ENST00000428021 TMEM101Q96IK0 257 aa10.84□□□□□ -0.67
VRK2-204ENST00000428021 BTF3L4Q96K17 158 aa10.84□□□□□ -0.67
VRK2-204ENST00000428021 SMIM2Q9BVW6 85 aa10.84□□□□□ -0.67
VRK2-204ENST00000428021 CDC42SE2Q9NRR3 84 aa10.84□□□□□ -0.67
VRK2-204ENST00000428021 TMEM136Q6ZRR5 245 aa10.83□□□□□ -0.68
VRK2-204ENST00000428021 ORMDL3Q8N138 153 aa10.83□□□□□ -0.68
VRK2-204ENST00000428021 CHCHD10Q8WYQ3 142 aaPredicted RBP10.83□□□□□ -0.68
VRK2-204ENST00000428021 IMMP2LQ96T52 175 aa10.83□□□□□ -0.68
VRK2-204ENST00000428021 LINC00959A0A1B0GUT2 108 aa10.82□□□□□ -0.68
VRK2-204ENST00000428021 C10orf91Q5T1B1 145 aa10.82□□□□□ -0.68
VRK2-204ENST00000428021 DGAT2L7PQ6IED9 249 aa10.82□□□□□ -0.68
VRK2-204ENST00000428021 ZNF664Q8N3J9 261 aa10.82□□□□□ -0.68
VRK2-204ENST00000428021 CLRN3Q8NCR9 226 aa10.82□□□□□ -0.68
VRK2-204ENST00000428021 PRELID3AQ96N28 172 aa10.82□□□□□ -0.68
VRK2-204ENST00000428021 CTDSP1Q9GZU7 261 aa10.82□□□□□ -0.68
VRK2-204ENST00000428021 UBE2D4Q9Y2X8 147 aa10.82□□□□□ -0.68
VRK2-204ENST00000428021 SMR3BP02814 79 aaPredicted RBP10.81□□□□□ -0.68
VRK2-204ENST00000428021 CSDC2Q9Y534 153 aaKnown RBP10.81□□□□□ -0.68
VRK2-204ENST00000428021 FOXI1Q12951 378 aa10.8□□□□□ -0.68
VRK2-204ENST00000428021 C15orf56Q8N910 161 aa10.8□□□□□ -0.68
VRK2-204ENST00000428021 VPS13BQ7Z7G8 4022 aa10.8□□□□□ -0.68
VRK2-204ENST00000428021 hDV102S1A0JD36 115 aa10.79□□□□□ -0.68
VRK2-204ENST00000428021 PRSS47A8MTI9 375 aa10.79□□□□□ -0.68
VRK2-204ENST00000428021 TCAPO15273 167 aa10.79□□□□□ -0.68
VRK2-204ENST00000428021 SLPIP03973 132 aa10.79□□□□□ -0.68
VRK2-204ENST00000428021 RPL39P62891 51 aaKnown RBP10.79□□□□□ -0.68
VRK2-204ENST00000428021 C9orf163Q8N9P6 203 aa10.79□□□□□ -0.68
VRK2-204ENST00000428021 FAM104AQ969W3 186 aa10.79□□□□□ -0.68
VRK2-204ENST00000428021 TIMM21Q9BVV7 248 aa10.79□□□□□ -0.68
VRK2-204ENST00000428021 EPM2AB3EWF7 344 aa10.78□□□□□ -0.68
VRK2-204ENST00000428021 CCL25O15444 150 aa10.78□□□□□ -0.68
VRK2-204ENST00000428021 CNBPP62633 177 aaKnown RBP10.78□□□□□ -0.68
VRK2-204ENST00000428021 CARHSP1Q9Y2V2 147 aaKnown RBP10.78□□□□□ -0.68
VRK2-204ENST00000428021 XCL1P47992 114 aa10.77□□□□□ -0.69
VRK2-204ENST00000428021 SMAGPQ0VAQ4 97 aa10.77□□□□□ -0.69
VRK2-204ENST00000428021 RNASE13Q5GAN3 156 aaKnown RBP10.77□□□□□ -0.69
VRK2-204ENST00000428021 TMEM18Q96B42 140 aa10.77□□□□□ -0.69
VRK2-204ENST00000428021 LAMTOR2Q9Y2Q5 125 aa10.77□□□□□ -0.69
VRK2-204ENST00000428021 TRAV9-1A0A075B6T8 112 aa10.76□□□□□ -0.69
VRK2-204ENST00000428021 SS18Q15532 418 aa10.76□□□□□ -0.69
VRK2-204ENST00000428021 Q5VSD8 79 aa10.76□□□□□ -0.69
VRK2-204ENST00000428021 CFAP161Q6P656 301 aa10.76□□□□□ -0.69
VRK2-204ENST00000428021 Q6ZUT4 128 aa10.76□□□□□ -0.69
VRK2-204ENST00000428021 SRRM2Q9UQ35 2752 aaKnown RBP10.76□□□□□ -0.69
VRK2-204ENST00000428021 LOC389332A0A1B0GUA5 103 aa10.75□□□□□ -0.69
VRK2-204ENST00000428021 SDIM1Q6ZPB5 146 aa10.75□□□□□ -0.69
VRK2-204ENST00000428021 SCXQ7RTU7 201 aa10.75□□□□□ -0.69
VRK2-204ENST00000428021 CHAC1Q9BUX1 264 aa10.75□□□□□ -0.69
VRK2-204ENST00000428021 HIGD2BQ4VC39 106 aa10.74□□□□□ -0.69
VRK2-204ENST00000428021 CD164L2Q6UWJ8 174 aa10.74□□□□□ -0.69
VRK2-204ENST00000428021 MAP1LC3AQ9H492 121 aa10.74□□□□□ -0.69
VRK2-204ENST00000428021 AP5S1Q9NUS5 200 aa10.74□□□□□ -0.69
VRK2-204ENST00000428021 GVQW2A0A096LPI5 108 aaPredicted RBP10.73□□□□□ -0.69
VRK2-204ENST00000428021 RAB5AP20339 215 aa10.73□□□□□ -0.69
VRK2-204ENST00000428021 Q8N8P6 123 aa10.73□□□□□ -0.69
VRK2-204ENST00000428021 OPRPNQ99935 248 aaPredicted RBP10.73□□□□□ -0.69
VRK2-204ENST00000428021 SPANXA1Q9NS26 97 aa10.73□□□□□ -0.69
VRK2-204ENST00000428021 TRAV13-1A0A0B4J241 112 aa10.72□□□□□ -0.69
VRK2-204ENST00000428021 C1orf196B1AJZ1 125 aa10.72□□□□□ -0.69
VRK2-204ENST00000428021 MRPS36P82909 103 aaKnown RBP10.72□□□□□ -0.69
VRK2-204ENST00000428021 RHEBQ15382 184 aa10.72□□□□□ -0.69
VRK2-204ENST00000428021 KIAA1644Q3SXP7 199 aa10.72□□□□□ -0.69
VRK2-204ENST00000428021 CIRBP-AS1Q8TBR5 109 aa10.72□□□□□ -0.69
VRK2-204ENST00000428021 PANO1I0J062 215 aa10.71□□□□□ -0.69
VRK2-204ENST00000428021 S100PP25815 95 aa10.71□□□□□ -0.69
VRK2-204ENST00000428021 RPS10P5Q9NQ39 176 aa10.71□□□□□ -0.69
VRK2-204ENST00000428021 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.71□□□□□ -0.69
VRK2-204ENST00000428021 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.7□□□□□ -0.7
VRK2-204ENST00000428021 IGHV1-58A0A0C4DH39 117 aa10.7□□□□□ -0.7
VRK2-204ENST00000428021 FAM229AH3BQW9 127 aa10.7□□□□□ -0.7
VRK2-204ENST00000428021 GNB1LQ9BYB4 327 aa10.7□□□□□ -0.7
VRK2-204ENST00000428021 PYGO1Q9Y3Y4 419 aa10.69□□□□□ -0.7
VRK2-204ENST00000428021 IGHV3-64A0A075B6Q5 118 aa10.68□□□□□ -0.7
VRK2-204ENST00000428021 IFI27P40305 119 aaPredicted RBP10.68□□□□□ -0.7
VRK2-204ENST00000428021 LINC00528Q8N1L1 170 aa10.68□□□□□ -0.7
VRK2-204ENST00000428021 LINC00526Q96FQ7 95 aa10.68□□□□□ -0.7
VRK2-204ENST00000428021 COX7A2LO14548 114 aa10.67□□□□□ -0.7
VRK2-204ENST00000428021 APOC3P02656 99 aa10.67□□□□□ -0.7
VRK2-204ENST00000428021 CIRBPQ14011 172 aaKnown RBP10.67□□□□□ -0.7
VRK2-204ENST00000428021 NXT2Q9NPJ8 142 aaKnown RBP10.67□□□□□ -0.7
VRK2-204ENST00000428021 IGLV4-3A0A075B6K6 122 aa10.66□□□□□ -0.7
VRK2-204ENST00000428021 K7EMI3 77 aa10.66□□□□□ -0.7
VRK2-204ENST00000428021 ORMDL2Q53FV1 153 aa10.66□□□□□ -0.7
VRK2-204ENST00000428021 C2orf66Q6UXQ4 117 aa10.66□□□□□ -0.7
VRK2-204ENST00000428021 C5orf38Q86SI9 138 aa10.66□□□□□ -0.7
VRK2-204ENST00000428021 IFITM10A6NMD0 228 aa10.65□□□□□ -0.7
VRK2-204ENST00000428021 INAFM2P0DMQ5 153 aa10.65□□□□□ -0.7
VRK2-204ENST00000428021 COX19Q49B96 90 aa10.65□□□□□ -0.7
VRK2-204ENST00000428021 ALKBH7Q9BT30 221 aaPredicted RBP10.65□□□□□ -0.7
VRK2-204ENST00000428021 CYSLTR1Q9Y271 337 aa10.65□□□□□ -0.7
VRK2-204ENST00000428021 IGHV3OR16-9A0A0B4J2B5 98 aa10.64□□□□□ -0.71
VRK2-204ENST00000428021 CHTF8P0CG12 524 aa10.64□□□□□ -0.71
VRK2-204ENST00000428021 MALP21145 153 aa10.64□□□□□ -0.71
VRK2-204ENST00000428021 COX6A2Q02221 97 aa10.64□□□□□ -0.71
VRK2-204ENST00000428021 PRSS3P2Q8NHM4 247 aa10.64□□□□□ -0.71
VRK2-204ENST00000428021 TMEM141Q96I45 108 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 235.8 ms