RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 HMCN2Q8NDA2 5059 aa10.12□□□□□ -0.79
HLA-DQB2-230ENST00000427449 IGKV3OR2-268A0A0C4DH90 116 aa10.11□□□□□ -0.79
HLA-DQB2-230ENST00000427449 LINC00959A0A1B0GUT2 108 aa10.11□□□□□ -0.79
HLA-DQB2-230ENST00000427449 PMCHP20382 165 aa10.11□□□□□ -0.79
HLA-DQB2-230ENST00000427449 NAT8BQ9UHF3 227 aa10.11□□□□□ -0.79
HLA-DQB2-230ENST00000427449 TNXBP22105 4242 aa10.1□□□□□ -0.79
HLA-DQB2-230ENST00000427449 RIGQ13278 110 aa10.1□□□□□ -0.79
HLA-DQB2-230ENST00000427449 HIGD2BQ4VC39 106 aa10.1□□□□□ -0.79
HLA-DQB2-230ENST00000427449 RNASEKQ6P5S7 137 aaKnown RBP10.1□□□□□ -0.79
HLA-DQB2-230ENST00000427449 SMDT1Q9H4I9 107 aa10.1□□□□□ -0.79
HLA-DQB2-230ENST00000427449 UBE2D4Q9Y2X8 147 aa10.1□□□□□ -0.79
HLA-DQB2-230ENST00000427449 TRBV24-1A0A075B6N3 115 aa10.09□□□□□ -0.79
HLA-DQB2-230ENST00000427449 SUMO2P61956 95 aaKnown RBP10.09□□□□□ -0.79
HLA-DQB2-230ENST00000427449 AMMECR1LQ6DCA0 310 aa10.09□□□□□ -0.79
HLA-DQB2-230ENST00000427449 BORCS7Q96B45 105 aa10.09□□□□□ -0.79
HLA-DQB2-230ENST00000427449 IGHV3-64A0A075B6Q5 118 aa10.08□□□□□ -0.8
HLA-DQB2-230ENST00000427449 A0A087WYN8 130 aa10.08□□□□□ -0.8
HLA-DQB2-230ENST00000427449 C7orf77A4D0Y5 90 aa10.08□□□□□ -0.8
HLA-DQB2-230ENST00000427449 CCL25O15444 150 aa10.08□□□□□ -0.8
HLA-DQB2-230ENST00000427449 RPL37AP61513 92 aaKnown RBP10.08□□□□□ -0.8
HLA-DQB2-230ENST00000427449 RPL32P62910 135 aaKnown RBP10.08□□□□□ -0.8
HLA-DQB2-230ENST00000427449 PRSS3P2Q8NHM4 247 aa10.08□□□□□ -0.8
HLA-DQB2-230ENST00000427449 PLAC8Q9NZF1 115 aa10.08□□□□□ -0.8
HLA-DQB2-230ENST00000427449 CSDC2Q9Y534 153 aaKnown RBP10.08□□□□□ -0.8
HLA-DQB2-230ENST00000427449 MT1HL1P0DM35 61 aa10.06□□□□□ -0.8
HLA-DQB2-230ENST00000427449 XCL1P47992 114 aa10.06□□□□□ -0.8
HLA-DQB2-230ENST00000427449 PEA15Q15121 130 aa10.06□□□□□ -0.8
HLA-DQB2-230ENST00000427449 Q6ZUT4 128 aa10.06□□□□□ -0.8
HLA-DQB2-230ENST00000427449 ZNF664Q8N3J9 261 aa10.06□□□□□ -0.8
HLA-DQB2-230ENST00000427449 LINC00526Q96FQ7 95 aa10.06□□□□□ -0.8
HLA-DQB2-230ENST00000427449 A0A096LNI7 61 aa10.05□□□□□ -0.8
HLA-DQB2-230ENST00000427449 NPYP01303 97 aa10.05□□□□□ -0.8
HLA-DQB2-230ENST00000427449 COX6A2Q02221 97 aa10.05□□□□□ -0.8
HLA-DQB2-230ENST00000427449 RNASE13Q5GAN3 156 aaKnown RBP10.05□□□□□ -0.8
HLA-DQB2-230ENST00000427449 VCYO14598 125 aa10.04□□□□□ -0.8
HLA-DQB2-230ENST00000427449 CAMPP49913 170 aa10.04□□□□□ -0.8
HLA-DQB2-230ENST00000427449 MRPL54Q6P161 138 aaKnown RBP10.04□□□□□ -0.8
HLA-DQB2-230ENST00000427449 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.03□□□□□ -0.8
HLA-DQB2-230ENST00000427449 A0A1B0GW15 77 aa10.03□□□□□ -0.8
HLA-DQB2-230ENST00000427449 LINC00862A6NCI5 91 aa10.03□□□□□ -0.8
HLA-DQB2-230ENST00000427449 TNFRSF6BO95407 300 aa10.03□□□□□ -0.8
HLA-DQB2-230ENST00000427449 RPL39P62891 51 aaKnown RBP10.03□□□□□ -0.8
HLA-DQB2-230ENST00000427449 CD164L2Q6UWJ8 174 aa10.03□□□□□ -0.8
HLA-DQB2-230ENST00000427449 C20orf78Q9BR46 151 aa10.03□□□□□ -0.8
HLA-DQB2-230ENST00000427449 TIMM21Q9BVV7 248 aa10.03□□□□□ -0.8
HLA-DQB2-230ENST00000427449 SMIM2Q9BVW6 85 aa10.03□□□□□ -0.8
HLA-DQB2-230ENST00000427449 AP5S1Q9NUS5 200 aa10.03□□□□□ -0.8
HLA-DQB2-230ENST00000427449 D6R8Y8 96 aa10.02□□□□□ -0.81
HLA-DQB2-230ENST00000427449 OXTP01178 125 aa10.02□□□□□ -0.81
HLA-DQB2-230ENST00000427449 HBBP68871 147 aa10.02□□□□□ -0.81
HLA-DQB2-230ENST00000427449 CFAP161Q6P656 301 aa10.02□□□□□ -0.81
HLA-DQB2-230ENST00000427449 IGHV1-58A0A0C4DH39 117 aa10.01□□□□□ -0.81
HLA-DQB2-230ENST00000427449 PPP1R2P9O14990 202 aa10.01□□□□□ -0.81
HLA-DQB2-230ENST00000427449 PPP1R17O96001 155 aa10.01□□□□□ -0.81
HLA-DQB2-230ENST00000427449 TMEM101Q96IK0 257 aa10.01□□□□□ -0.81
HLA-DQB2-230ENST00000427449 BTF3L4Q96K17 158 aa10.01□□□□□ -0.81
HLA-DQB2-230ENST00000427449 J3QL48 77 aa10□□□□□ -0.81
HLA-DQB2-230ENST00000427449 PHOX2AO14813 284 aa9.99□□□□□ -0.81
HLA-DQB2-230ENST00000427449 ADCYAP1P18509 176 aa9.99□□□□□ -0.81
HLA-DQB2-230ENST00000427449 OPRPNQ99935 248 aaPredicted RBP9.99□□□□□ -0.81
HLA-DQB2-230ENST00000427449 FCER1GP30273 86 aa9.98□□□□□ -0.81
HLA-DQB2-230ENST00000427449 CKS2P33552 79 aa9.98□□□□□ -0.81
HLA-DQB2-230ENST00000427449 IFITM2Q01629 132 aa9.98□□□□□ -0.81
HLA-DQB2-230ENST00000427449 SS18Q15532 418 aa9.98□□□□□ -0.81
HLA-DQB2-230ENST00000427449 ATP5L2Q7Z4Y8 100 aa9.98□□□□□ -0.81
HLA-DQB2-230ENST00000427449 KIR2DL4Q99706 377 aa9.98□□□□□ -0.81
HLA-DQB2-230ENST00000427449 IGKV2-24A0A0C4DH68 120 aa9.97□□□□□ -0.81
HLA-DQB2-230ENST00000427449 PRSS47A8MTI9 375 aa9.97□□□□□ -0.81
HLA-DQB2-230ENST00000427449 Q6ZRU5 148 aa9.97□□□□□ -0.81
HLA-DQB2-230ENST00000427449 CARD19Q96LW7 228 aa9.97□□□□□ -0.81
HLA-DQB2-230ENST00000427449 IGLV4-69A0A075B6H9 119 aa9.96□□□□□ -0.82
HLA-DQB2-230ENST00000427449 IGHV3OR16-9A0A0B4J2B5 98 aa9.96□□□□□ -0.82
HLA-DQB2-230ENST00000427449 C1orf196B1AJZ1 125 aa9.96□□□□□ -0.82
HLA-DQB2-230ENST00000427449 TCAPO15273 167 aa9.96□□□□□ -0.82
HLA-DQB2-230ENST00000427449 PRR3P79522 188 aaKnown RBP9.96□□□□□ -0.82
HLA-DQB2-230ENST00000427449 MRPS36P82909 103 aaKnown RBP9.96□□□□□ -0.82
HLA-DQB2-230ENST00000427449 MAJINQ3KP22 176 aa9.95□□□□□ -0.82
HLA-DQB2-230ENST00000427449 TRAV13-1A0A0B4J241 112 aa9.94□□□□□ -0.82
HLA-DQB2-230ENST00000427449 PPBPP02775 128 aa9.94□□□□□ -0.82
HLA-DQB2-230ENST00000427449 SYCNQ0VAF6 134 aa9.94□□□□□ -0.82
HLA-DQB2-230ENST00000427449 PNRC1Q12796 327 aaPredicted RBP9.94□□□□□ -0.82
HLA-DQB2-230ENST00000427449 CLLU1Q5K131 121 aa9.94□□□□□ -0.82
HLA-DQB2-230ENST00000427449 STPG4Q8N801 248 aa9.94□□□□□ -0.82
HLA-DQB2-230ENST00000427449 SPANXA1Q9NS26 97 aa9.94□□□□□ -0.82
HLA-DQB2-230ENST00000427449 F8W036 122 aa9.93□□□□□ -0.82
HLA-DQB2-230ENST00000427449 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.93□□□□□ -0.82
HLA-DQB2-230ENST00000427449 COX7A2LO14548 114 aa9.93□□□□□ -0.82
HLA-DQB2-230ENST00000427449 PTTG1IPP53801 180 aa9.93□□□□□ -0.82
HLA-DQB2-230ENST00000427449 LINC00173Q6ZV60 143 aa9.93□□□□□ -0.82
HLA-DQB2-230ENST00000427449 C5orf38Q86SI9 138 aa9.93□□□□□ -0.82
HLA-DQB2-230ENST00000427449 ORMDL3Q8N138 153 aa9.93□□□□□ -0.82
HLA-DQB2-230ENST00000427449 IGLV4-3A0A075B6K6 122 aa9.92□□□□□ -0.82
HLA-DQB2-230ENST00000427449 S100A8P05109 93 aa9.92□□□□□ -0.82
HLA-DQB2-230ENST00000427449 PRELID3AQ96N28 172 aa9.92□□□□□ -0.82
HLA-DQB2-230ENST00000427449 TMEM136Q6ZRR5 245 aa9.91□□□□□ -0.82
HLA-DQB2-230ENST00000427449 C2orf48Q96LS8 159 aa9.91□□□□□ -0.82
HLA-DQB2-230ENST00000427449 A0A1W2PNN7 141 aa9.9□□□□□ -0.82
HLA-DQB2-230ENST00000427449 ANAPC16Q96DE5 110 aa9.9□□□□□ -0.82
HLA-DQB2-230ENST00000427449 PYGO1Q9Y3Y4 419 aa9.9□□□□□ -0.82
HLA-DQB2-230ENST00000427449 ZNF561-AS1K7EIQ3 104 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms