RNA–Protein interactions for RNA: ENST00000427419.5

SLC40A1-204, Transcript of solute carrier family 40 member 1, humanhuman

TSL 1 (best)

Gene SLC40A1, Length 299 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC40A1-204ENST00000427419 RAB14P61106 215 aa6.49□□□□□ -1.37
SLC40A1-204ENST00000427419 RPL32P62910 135 aaKnown RBP6.49□□□□□ -1.37
SLC40A1-204ENST00000427419 SS18Q15532 418 aa6.49□□□□□ -1.37
SLC40A1-204ENST00000427419 SDIM1Q6ZPB5 146 aa6.49□□□□□ -1.37
SLC40A1-204ENST00000427419 CSDC2Q9Y534 153 aaKnown RBP6.49□□□□□ -1.37
SLC40A1-204ENST00000427419 VPS13BQ7Z7G8 4022 aa6.48□□□□□ -1.37
SLC40A1-204ENST00000427419 TRBV24-1A0A075B6N3 115 aa6.48□□□□□ -1.37
SLC40A1-204ENST00000427419 GVQW2A0A096LPI5 108 aaPredicted RBP6.48□□□□□ -1.37
SLC40A1-204ENST00000427419 C9JQL5 133 aa6.48□□□□□ -1.37
SLC40A1-204ENST00000427419 PPBPP02775 128 aa6.48□□□□□ -1.37
SLC40A1-204ENST00000427419 RPS10P46783 165 aaKnown RBP6.48□□□□□ -1.37
SLC40A1-204ENST00000427419 HBBP68871 147 aa6.48□□□□□ -1.37
SLC40A1-204ENST00000427419 PNRC1Q12796 327 aaPredicted RBP6.48□□□□□ -1.37
SLC40A1-204ENST00000427419 ATP5L2Q7Z4Y8 100 aa6.48□□□□□ -1.37
SLC40A1-204ENST00000427419 NRACQ8N912 160 aa6.48□□□□□ -1.37
SLC40A1-204ENST00000427419 IGHV1-58A0A0C4DH39 117 aa6.47□□□□□ -1.37
SLC40A1-204ENST00000427419 LINC00959A0A1B0GUT2 108 aa6.47□□□□□ -1.37
SLC40A1-204ENST00000427419 PHOX2AO14813 284 aa6.47□□□□□ -1.37
SLC40A1-204ENST00000427419 GAS8-AS1O95177 125 aa6.47□□□□□ -1.37
SLC40A1-204ENST00000427419 CKS2P33552 79 aa6.47□□□□□ -1.37
SLC40A1-204ENST00000427419 CAMPP49913 170 aa6.47□□□□□ -1.37
SLC40A1-204ENST00000427419 SRSF3P84103 164 aaKnown RBP6.47□□□□□ -1.37
SLC40A1-204ENST00000427419 CIRBPQ14011 172 aaKnown RBP6.47□□□□□ -1.37
SLC40A1-204ENST00000427419 MRPL51Q4U2R6 128 aaKnown RBP6.47□□□□□ -1.37
SLC40A1-204ENST00000427419 ZNF664Q8N3J9 261 aa6.47□□□□□ -1.37
SLC40A1-204ENST00000427419 C15orf56Q8N910 161 aa6.47□□□□□ -1.37
SLC40A1-204ENST00000427419 CDC42SE2Q9NRR3 84 aa6.47□□□□□ -1.37
SLC40A1-204ENST00000427419 FLG2Q5D862 2391 aaPredicted RBP6.46□□□□□ -1.37
SLC40A1-204ENST00000427419 C1orf196B1AJZ1 125 aa6.46□□□□□ -1.38
SLC40A1-204ENST00000427419 J3QL48 77 aa6.46□□□□□ -1.38
SLC40A1-204ENST00000427419 XCL1P47992 114 aa6.46□□□□□ -1.38
SLC40A1-204ENST00000427419 FOXI1Q12951 378 aa6.46□□□□□ -1.38
SLC40A1-204ENST00000427419 CD164L2Q6UWJ8 174 aa6.46□□□□□ -1.38
SLC40A1-204ENST00000427419 TIMM21Q9BVV7 248 aa6.46□□□□□ -1.38
SLC40A1-204ENST00000427419 DMBT1Q9UGM3 2413 aaPredicted RBP6.46□□□□□ -1.38
SLC40A1-204ENST00000427419 KRTAP29-1A8MX34 341 aaPredicted RBP6.45□□□□□ -1.38
SLC40A1-204ENST00000427419 SMKR1H3BMG3 65 aa6.45□□□□□ -1.38
SLC40A1-204ENST00000427419 RPL37AP61513 92 aaKnown RBP6.45□□□□□ -1.38
SLC40A1-204ENST00000427419 ANAPC16Q96DE5 110 aa6.45□□□□□ -1.38
SLC40A1-204ENST00000427419 DPH3Q96FX2 82 aa6.45□□□□□ -1.38
SLC40A1-204ENST00000427419 LINC00474Q9P2X8 69 aa6.45□□□□□ -1.38
SLC40A1-204ENST00000427419 UBE2D4Q9Y2X8 147 aa6.45□□□□□ -1.38
SLC40A1-204ENST00000427419 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.45□□□□□ -1.38
SLC40A1-204ENST00000427419 A0A1B0GXF2 115 aa6.44□□□□□ -1.38
SLC40A1-204ENST00000427419 TNFRSF6BO95407 300 aa6.44□□□□□ -1.38
SLC40A1-204ENST00000427419 MT-ND4LP03901 98 aa6.44□□□□□ -1.38
SLC40A1-204ENST00000427419 HIGD2BQ4VC39 106 aa6.44□□□□□ -1.38
SLC40A1-204ENST00000427419 MRPL54Q6P161 138 aaKnown RBP6.44□□□□□ -1.38
SLC40A1-204ENST00000427419 SPACA4Q8TDM5 124 aa6.44□□□□□ -1.38
SLC40A1-204ENST00000427419 SMIM2Q9BVW6 85 aa6.44□□□□□ -1.38
SLC40A1-204ENST00000427419 LAMTOR2Q9Y2Q5 125 aa6.44□□□□□ -1.38
SLC40A1-204ENST00000427419 D6R8Y8 96 aa6.43□□□□□ -1.38
SLC40A1-204ENST00000427419 ZNF561-AS1K7EIQ3 104 aa6.43□□□□□ -1.38
SLC40A1-204ENST00000427419 SLPIP03973 132 aa6.43□□□□□ -1.38
SLC40A1-204ENST00000427419 MALP21145 153 aa6.43□□□□□ -1.38
SLC40A1-204ENST00000427419 ORMDL3Q8N138 153 aa6.43□□□□□ -1.38
SLC40A1-204ENST00000427419 SPANXA1Q9NS26 97 aa6.43□□□□□ -1.38
SLC40A1-204ENST00000427419 SRRM2Q9UQ35 2752 aaKnown RBP6.42□□□□□ -1.38
SLC40A1-204ENST00000427419 COX7A2LO14548 114 aa6.42□□□□□ -1.38
SLC40A1-204ENST00000427419 APOMO95445 188 aa6.42□□□□□ -1.38
SLC40A1-204ENST00000427419 OXTP01178 125 aa6.42□□□□□ -1.38
SLC40A1-204ENST00000427419 RAB5AP20339 215 aa6.42□□□□□ -1.38
SLC40A1-204ENST00000427419 KRTAP10-4P60372 401 aaPredicted RBP6.42□□□□□ -1.38
SLC40A1-204ENST00000427419 C7orf33Q8WU49 177 aa6.42□□□□□ -1.38
SLC40A1-204ENST00000427419 CARD19Q96LW7 228 aa6.42□□□□□ -1.38
SLC40A1-204ENST00000427419 PLAC8Q9NZF1 115 aa6.42□□□□□ -1.38
SLC40A1-204ENST00000427419 A0A087WYN8 130 aa6.41□□□□□ -1.38
SLC40A1-204ENST00000427419 MRPS36P82909 103 aaKnown RBP6.41□□□□□ -1.38
SLC40A1-204ENST00000427419 COX6A2Q02221 97 aa6.41□□□□□ -1.38
SLC40A1-204ENST00000427419 CLLU1Q5K131 121 aa6.41□□□□□ -1.38
SLC40A1-204ENST00000427419 TMEM136Q6ZRR5 245 aa6.41□□□□□ -1.38
SLC40A1-204ENST00000427419 TRAV13-1A0A0B4J241 112 aa6.4□□□□□ -1.38
SLC40A1-204ENST00000427419 F8WDY8 70 aa6.4□□□□□ -1.38
SLC40A1-204ENST00000427419 PANO1I0J062 215 aa6.4□□□□□ -1.38
SLC40A1-204ENST00000427419 NPYP01303 97 aa6.4□□□□□ -1.38
SLC40A1-204ENST00000427419 SYCNQ0VAF6 134 aa6.4□□□□□ -1.38
SLC40A1-204ENST00000427419 UQCC3Q6UW78 93 aa6.4□□□□□ -1.38
SLC40A1-204ENST00000427419 PRELID3AQ96N28 172 aa6.4□□□□□ -1.38
SLC40A1-204ENST00000427419 MYCBP2O75592 4640 aa6.39□□□□□ -1.39
SLC40A1-204ENST00000427419 PRSS47A8MTI9 375 aa6.39□□□□□ -1.39
SLC40A1-204ENST00000427419 K7EMI3 77 aa6.39□□□□□ -1.39
SLC40A1-204ENST00000427419 CHTF8P0CG12 524 aa6.39□□□□□ -1.39
SLC40A1-204ENST00000427419 IFI27P40305 119 aaPredicted RBP6.39□□□□□ -1.39
SLC40A1-204ENST00000427419 MAJINQ3KP22 176 aa6.39□□□□□ -1.39
SLC40A1-204ENST00000427419 Q6ZUT4 128 aa6.39□□□□□ -1.39
SLC40A1-204ENST00000427419 PRSS3P2Q8NHM4 247 aa6.39□□□□□ -1.39
SLC40A1-204ENST00000427419 C2orf48Q96LS8 159 aa6.39□□□□□ -1.39
SLC40A1-204ENST00000427419 IMMP2LQ96T52 175 aa6.39□□□□□ -1.39
SLC40A1-204ENST00000427419 MAP1LC3AQ9H492 121 aa6.39□□□□□ -1.39
SLC40A1-204ENST00000427419 IGLV4-69A0A075B6H9 119 aa6.38□□□□□ -1.39
SLC40A1-204ENST00000427419 IGKV2-24A0A0C4DH68 120 aa6.38□□□□□ -1.39
SLC40A1-204ENST00000427419 G0S2P27469 103 aa6.38□□□□□ -1.39
SLC40A1-204ENST00000427419 Q6ZRU5 148 aa6.38□□□□□ -1.39
SLC40A1-204ENST00000427419 OR10D4PQ8NGN7 298 aa6.38□□□□□ -1.39
SLC40A1-204ENST00000427419 PYGO1Q9Y3Y4 419 aa6.38□□□□□ -1.39
SLC40A1-204ENST00000427419 TRAV9-1A0A075B6T8 112 aa6.37□□□□□ -1.39
SLC40A1-204ENST00000427419 LOC107984640A0A0U1RRK4 108 aa6.37□□□□□ -1.39
SLC40A1-204ENST00000427419 NPSP0C0P6 89 aa6.37□□□□□ -1.39
SLC40A1-204ENST00000427419 RPL39P62891 51 aaKnown RBP6.37□□□□□ -1.39
SLC40A1-204ENST00000427419 RNASE13Q5GAN3 156 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms