RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 LINC00959A0A1B0GUT2 108 aa6.92□□□□□ -1.3
LINC01238-202ENST00000426962 C7orf77A4D0Y5 90 aa6.92□□□□□ -1.3
LINC01238-202ENST00000426962 S100A8P05109 93 aa6.92□□□□□ -1.3
LINC01238-202ENST00000426962 FCER1GP30273 86 aa6.92□□□□□ -1.3
LINC01238-202ENST00000426962 RAB14P61106 215 aa6.92□□□□□ -1.3
LINC01238-202ENST00000426962 ZNF664Q8N3J9 261 aa6.92□□□□□ -1.3
LINC01238-202ENST00000426962 C15orf56Q8N910 161 aa6.92□□□□□ -1.3
LINC01238-202ENST00000426962 C20orf78Q9BR46 151 aa6.92□□□□□ -1.3
LINC01238-202ENST00000426962 CDC42SE2Q9NRR3 84 aa6.92□□□□□ -1.3
LINC01238-202ENST00000426962 SRRM2Q9UQ35 2752 aaKnown RBP6.92□□□□□ -1.3
LINC01238-202ENST00000426962 TRBV24-1A0A075B6N3 115 aa6.91□□□□□ -1.3
LINC01238-202ENST00000426962 IGHV3-64A0A075B6Q5 118 aa6.91□□□□□ -1.3
LINC01238-202ENST00000426962 F8W036 122 aa6.91□□□□□ -1.3
LINC01238-202ENST00000426962 CKS2P33552 79 aa6.91□□□□□ -1.3
LINC01238-202ENST00000426962 HBBP68871 147 aa6.91□□□□□ -1.3
LINC01238-202ENST00000426962 SMAGPQ0VAQ4 97 aa6.91□□□□□ -1.3
LINC01238-202ENST00000426962 FOXI1Q12951 378 aa6.91□□□□□ -1.3
LINC01238-202ENST00000426962 CSDC2Q9Y534 153 aaKnown RBP6.91□□□□□ -1.3
LINC01238-202ENST00000426962 CCL25O15444 150 aa6.9□□□□□ -1.3
LINC01238-202ENST00000426962 XCL1P47992 114 aa6.9□□□□□ -1.3
LINC01238-202ENST00000426962 RPL32P62910 135 aaKnown RBP6.9□□□□□ -1.3
LINC01238-202ENST00000426962 SS18Q15532 418 aa6.9□□□□□ -1.3
LINC01238-202ENST00000426962 MRPL54Q6P161 138 aaKnown RBP6.9□□□□□ -1.3
LINC01238-202ENST00000426962 DPH3Q96FX2 82 aa6.9□□□□□ -1.3
LINC01238-202ENST00000426962 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.9□□□□□ -1.3
LINC01238-202ENST00000426962 A0A1B0GXF2 115 aa6.89□□□□□ -1.31
LINC01238-202ENST00000426962 TCAPO15273 167 aa6.89□□□□□ -1.31
LINC01238-202ENST00000426962 TNFRSF6BO95407 300 aa6.89□□□□□ -1.31
LINC01238-202ENST00000426962 HIGD2BQ4VC39 106 aa6.89□□□□□ -1.31
LINC01238-202ENST00000426962 CD164L2Q6UWJ8 174 aa6.89□□□□□ -1.31
LINC01238-202ENST00000426962 TMEM18Q96B42 140 aa6.89□□□□□ -1.31
LINC01238-202ENST00000426962 UBE2D4Q9Y2X8 147 aa6.89□□□□□ -1.31
LINC01238-202ENST00000426962 GVQW2A0A096LPI5 108 aaPredicted RBP6.88□□□□□ -1.31
LINC01238-202ENST00000426962 D6R8Y8 96 aa6.88□□□□□ -1.31
LINC01238-202ENST00000426962 PANO1I0J062 215 aa6.88□□□□□ -1.31
LINC01238-202ENST00000426962 PPBPP02775 128 aa6.88□□□□□ -1.31
LINC01238-202ENST00000426962 KRTAP10-4P60372 401 aaPredicted RBP6.88□□□□□ -1.31
LINC01238-202ENST00000426962 PNRC1Q12796 327 aaPredicted RBP6.88□□□□□ -1.31
LINC01238-202ENST00000426962 CIRBPQ14011 172 aaKnown RBP6.88□□□□□ -1.31
LINC01238-202ENST00000426962 ATP5L2Q7Z4Y8 100 aa6.88□□□□□ -1.31
LINC01238-202ENST00000426962 ANAPC16Q96DE5 110 aa6.88□□□□□ -1.31
LINC01238-202ENST00000426962 IGHV1-58A0A0C4DH39 117 aa6.87□□□□□ -1.31
LINC01238-202ENST00000426962 C1orf196B1AJZ1 125 aa6.87□□□□□ -1.31
LINC01238-202ENST00000426962 PHOX2AO14813 284 aa6.87□□□□□ -1.31
LINC01238-202ENST00000426962 MT-ND4LP03901 98 aa6.87□□□□□ -1.31
LINC01238-202ENST00000426962 TIMM21Q9BVV7 248 aa6.87□□□□□ -1.31
LINC01238-202ENST00000426962 MYCBP2O75592 4640 aa6.86□□□□□ -1.31
LINC01238-202ENST00000426962 RPL37AP61513 92 aaKnown RBP6.86□□□□□ -1.31
LINC01238-202ENST00000426962 COX6A2Q02221 97 aa6.86□□□□□ -1.31
LINC01238-202ENST00000426962 CLLU1Q5K131 121 aa6.86□□□□□ -1.31
LINC01238-202ENST00000426962 TMEM136Q6ZRR5 245 aa6.86□□□□□ -1.31
LINC01238-202ENST00000426962 ORMDL3Q8N138 153 aa6.86□□□□□ -1.31
LINC01238-202ENST00000426962 SMIM2Q9BVW6 85 aa6.86□□□□□ -1.31
LINC01238-202ENST00000426962 FLG2Q5D862 2391 aaPredicted RBP6.86□□□□□ -1.31
LINC01238-202ENST00000426962 A0A087WYN8 130 aa6.85□□□□□ -1.31
LINC01238-202ENST00000426962 KRTAP29-1A8MX34 341 aaPredicted RBP6.85□□□□□ -1.31
LINC01238-202ENST00000426962 J3QL48 77 aa6.85□□□□□ -1.31
LINC01238-202ENST00000426962 NPYP01303 97 aa6.85□□□□□ -1.31
LINC01238-202ENST00000426962 CHTF8P0CG12 524 aa6.85□□□□□ -1.31
LINC01238-202ENST00000426962 PRSS3P2Q8NHM4 247 aa6.85□□□□□ -1.31
LINC01238-202ENST00000426962 SPACA4Q8TDM5 124 aa6.85□□□□□ -1.31
LINC01238-202ENST00000426962 TRAV13-1A0A0B4J241 112 aa6.84□□□□□ -1.31
LINC01238-202ENST00000426962 ZNF561-AS1K7EIQ3 104 aa6.84□□□□□ -1.31
LINC01238-202ENST00000426962 MALP21145 153 aa6.84□□□□□ -1.31
LINC01238-202ENST00000426962 RPL39P62891 51 aaKnown RBP6.84□□□□□ -1.31
LINC01238-202ENST00000426962 RNASE13Q5GAN3 156 aaKnown RBP6.84□□□□□ -1.31
LINC01238-202ENST00000426962 PRELID3AQ96N28 172 aa6.84□□□□□ -1.31
LINC01238-202ENST00000426962 PRSS47A8MTI9 375 aa6.83□□□□□ -1.32
LINC01238-202ENST00000426962 COX7A2LO14548 114 aa6.83□□□□□ -1.32
LINC01238-202ENST00000426962 RAB5AP20339 215 aa6.83□□□□□ -1.32
LINC01238-202ENST00000426962 Q6ZUT4 128 aa6.83□□□□□ -1.32
LINC01238-202ENST00000426962 LINC00526Q96FQ7 95 aa6.83□□□□□ -1.32
LINC01238-202ENST00000426962 SPANXA1Q9NS26 97 aa6.83□□□□□ -1.32
LINC01238-202ENST00000426962 PLAC8Q9NZF1 115 aa6.83□□□□□ -1.32
LINC01238-202ENST00000426962 PKIGQ9Y2B9 76 aa6.83□□□□□ -1.32
LINC01238-202ENST00000426962 LAMTOR2Q9Y2Q5 125 aa6.83□□□□□ -1.32
LINC01238-202ENST00000426962 HERC1Q15751 4861 aa6.83□□□□□ -1.32
LINC01238-202ENST00000426962 MRPS36P82909 103 aaKnown RBP6.82□□□□□ -1.32
LINC01238-202ENST00000426962 SYCNQ0VAF6 134 aa6.82□□□□□ -1.32
LINC01238-202ENST00000426962 MAJINQ3KP22 176 aa6.82□□□□□ -1.32
LINC01238-202ENST00000426962 UQCC3Q6UW78 93 aa6.82□□□□□ -1.32
LINC01238-202ENST00000426962 FAM104AQ969W3 186 aa6.82□□□□□ -1.32
LINC01238-202ENST00000426962 CARD19Q96LW7 228 aa6.82□□□□□ -1.32
LINC01238-202ENST00000426962 LINC00474Q9P2X8 69 aa6.82□□□□□ -1.32
LINC01238-202ENST00000426962 IGKV2-24A0A0C4DH68 120 aa6.81□□□□□ -1.32
LINC01238-202ENST00000426962 APOMO95445 188 aa6.81□□□□□ -1.32
LINC01238-202ENST00000426962 OXTP01178 125 aa6.81□□□□□ -1.32
LINC01238-202ENST00000426962 IFITM2Q01629 132 aa6.81□□□□□ -1.32
LINC01238-202ENST00000426962 C5orf38Q86SI9 138 aa6.81□□□□□ -1.32
LINC01238-202ENST00000426962 IMMP2LQ96T52 175 aa6.81□□□□□ -1.32
LINC01238-202ENST00000426962 OPRPNQ99935 248 aaPredicted RBP6.81□□□□□ -1.32
LINC01238-202ENST00000426962 IGLV4-69A0A075B6H9 119 aa6.8□□□□□ -1.32
LINC01238-202ENST00000426962 A0A096LNI7 61 aa6.8□□□□□ -1.32
LINC01238-202ENST00000426962 LOC389332A0A1B0GUA5 103 aa6.8□□□□□ -1.32
LINC01238-202ENST00000426962 TMEM218A2RU14 115 aa6.8□□□□□ -1.32
LINC01238-202ENST00000426962 IFI27P40305 119 aaPredicted RBP6.8□□□□□ -1.32
LINC01238-202ENST00000426962 STPG4Q8N801 248 aa6.8□□□□□ -1.32
LINC01238-202ENST00000426962 MAP1LC3AQ9H492 121 aa6.8□□□□□ -1.32
LINC01238-202ENST00000426962 PYGO1Q9Y3Y4 419 aa6.8□□□□□ -1.32
LINC01238-202ENST00000426962 PKHD1L1Q86WI1 4243 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms