RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 PHOX2AO14813 284 aa8.32□□□□□ -1.08
GPC1-204ENST00000426280 UBE2L6O14933 153 aa8.32□□□□□ -1.08
GPC1-204ENST00000426280 TCAPO15273 167 aa8.32□□□□□ -1.08
GPC1-204ENST00000426280 FCER1GP30273 86 aa8.32□□□□□ -1.08
GPC1-204ENST00000426280 MRPL18Q9H0U6 180 aaKnown RBP8.32□□□□□ -1.08
GPC1-204ENST00000426280 PRR34Q9NV39 138 aa8.32□□□□□ -1.08
GPC1-204ENST00000426280 RPL32P62910 135 aaKnown RBP8.31□□□□□ -1.08
GPC1-204ENST00000426280 FABP9Q0Z7S8 132 aa8.31□□□□□ -1.08
GPC1-204ENST00000426280 COX19Q49B96 90 aa8.31□□□□□ -1.08
GPC1-204ENST00000426280 KIR2DL4Q99706 377 aa8.31□□□□□ -1.08
GPC1-204ENST00000426280 IGLV10-54A0A075B6I4 117 aa8.3□□□□□ -1.08
GPC1-204ENST00000426280 EPM2AB3EWF7 344 aa8.3□□□□□ -1.08
GPC1-204ENST00000426280 FGF6P10767 208 aa8.3□□□□□ -1.08
GPC1-204ENST00000426280 PKIAP61925 76 aa8.3□□□□□ -1.08
GPC1-204ENST00000426280 Q0VG73 95 aa8.3□□□□□ -1.08
GPC1-204ENST00000426280 Q5VSD8 79 aa8.3□□□□□ -1.08
GPC1-204ENST00000426280 RNASEKQ6P5S7 137 aaKnown RBP8.3□□□□□ -1.08
GPC1-204ENST00000426280 RMI2Q96E14 147 aa8.3□□□□□ -1.08
GPC1-204ENST00000426280 MAP1LC3AQ9H492 121 aa8.3□□□□□ -1.08
GPC1-204ENST00000426280 SMCO4Q9NRQ5 59 aa8.3□□□□□ -1.08
GPC1-204ENST00000426280 COX11Q9Y6N1 276 aa8.3□□□□□ -1.08
GPC1-204ENST00000426280 A0A1B0GUV1 79 aa8.29□□□□□ -1.08
GPC1-204ENST00000426280 PRSS47A8MTI9 375 aa8.29□□□□□ -1.08
GPC1-204ENST00000426280 MT-ND6P03923 174 aa8.29□□□□□ -1.08
GPC1-204ENST00000426280 PRSS1P07477 247 aa8.29□□□□□ -1.08
GPC1-204ENST00000426280 AMMECR1LQ6DCA0 310 aa8.29□□□□□ -1.08
GPC1-204ENST00000426280 Q6ZSA8 131 aa8.29□□□□□ -1.08
GPC1-204ENST00000426280 ALKBH7Q9BT30 221 aaPredicted RBP8.29□□□□□ -1.08
GPC1-204ENST00000426280 C1orf43Q9BWL3 253 aa8.29□□□□□ -1.08
GPC1-204ENST00000426280 LAMTOR2Q9Y2Q5 125 aa8.29□□□□□ -1.08
GPC1-204ENST00000426280 TRAPPC1Q9Y5R8 145 aa8.29□□□□□ -1.08
GPC1-204ENST00000426280 USP17L23D6RBM5 183 aa8.28□□□□□ -1.08
GPC1-204ENST00000426280 SCO1O75880 301 aa8.28□□□□□ -1.08
GPC1-204ENST00000426280 CRPP02741 224 aa8.28□□□□□ -1.08
GPC1-204ENST00000426280 RPL39P62891 51 aaKnown RBP8.28□□□□□ -1.08
GPC1-204ENST00000426280 REG3AQ06141 175 aa8.28□□□□□ -1.08
GPC1-204ENST00000426280 Q8N8P6 123 aa8.28□□□□□ -1.08
GPC1-204ENST00000426280 IGKV3OR2-268A0A0C4DH90 116 aa8.27□□□□□ -1.09
GPC1-204ENST00000426280 H7C423 109 aa8.27□□□□□ -1.09
GPC1-204ENST00000426280 IFI27P40305 119 aaPredicted RBP8.27□□□□□ -1.09
GPC1-204ENST00000426280 MIAQ16674 131 aa8.27□□□□□ -1.09
GPC1-204ENST00000426280 RAB5AP20339 215 aa8.26□□□□□ -1.09
GPC1-204ENST00000426280 UBE2D4Q9Y2X8 147 aa8.26□□□□□ -1.09
GPC1-204ENST00000426280 SLPIP03973 132 aa8.25□□□□□ -1.09
GPC1-204ENST00000426280 INAFM2P0DMQ5 153 aa8.25□□□□□ -1.09
GPC1-204ENST00000426280 RNASE13Q5GAN3 156 aaKnown RBP8.25□□□□□ -1.09
GPC1-204ENST00000426280 MRPL52Q86TS9 123 aaKnown RBP8.25□□□□□ -1.09
GPC1-204ENST00000426280 OR5A1Q8NGJ0 315 aa8.25□□□□□ -1.09
GPC1-204ENST00000426280 VPS13BQ7Z7G8 4022 aa8.25□□□□□ -1.09
GPC1-204ENST00000426280 ZNF25P17030 456 aaPredicted RBP8.24□□□□□ -1.09
GPC1-204ENST00000426280 SCXQ7RTU7 201 aa8.24□□□□□ -1.09
GPC1-204ENST00000426280 PRSS3P2Q8NHM4 247 aa8.24□□□□□ -1.09
GPC1-204ENST00000426280 TMEM101Q96IK0 257 aa8.24□□□□□ -1.09
GPC1-204ENST00000426280 OPRPNQ99935 248 aaPredicted RBP8.24□□□□□ -1.09
GPC1-204ENST00000426280 NXT2Q9NPJ8 142 aaKnown RBP8.24□□□□□ -1.09
GPC1-204ENST00000426280 CDC42SE2Q9NRR3 84 aa8.24□□□□□ -1.09
GPC1-204ENST00000426280 COLCA2A8K830 154 aa8.23□□□□□ -1.09
GPC1-204ENST00000426280 PANO1I0J062 215 aa8.23□□□□□ -1.09
GPC1-204ENST00000426280 DGAT2L7PQ6IED9 249 aa8.23□□□□□ -1.09
GPC1-204ENST00000426280 Q6ZUT4 128 aa8.23□□□□□ -1.09
GPC1-204ENST00000426280 FAM104AQ969W3 186 aa8.23□□□□□ -1.09
GPC1-204ENST00000426280 TMEM18Q96B42 140 aa8.23□□□□□ -1.09
GPC1-204ENST00000426280 ZNF664Q8N3J9 261 aa8.22□□□□□ -1.09
GPC1-204ENST00000426280 CIRBP-AS1Q8TBR5 109 aa8.22□□□□□ -1.09
GPC1-204ENST00000426280 C18orf32Q8TCD1 76 aa8.22□□□□□ -1.09
GPC1-204ENST00000426280 ATP6V1G1O75348 118 aa8.21□□□□□ -1.1
GPC1-204ENST00000426280 TRGC2P03986 189 aa8.21□□□□□ -1.1
GPC1-204ENST00000426280 ORMDL2Q53FV1 153 aa8.21□□□□□ -1.1
GPC1-204ENST00000426280 C2orf66Q6UXQ4 117 aa8.21□□□□□ -1.1
GPC1-204ENST00000426280 URB1-AS1Q96HZ7 61 aa8.21□□□□□ -1.1
GPC1-204ENST00000426280 TIMM21Q9BVV7 248 aa8.21□□□□□ -1.1
GPC1-204ENST00000426280 CSDC2Q9Y534 153 aaKnown RBP8.21□□□□□ -1.1
GPC1-204ENST00000426280 TRAV8-4A0A0B4J246 113 aa8.2□□□□□ -1.1
GPC1-204ENST00000426280 LINC00959A0A1B0GUT2 108 aa8.2□□□□□ -1.1
GPC1-204ENST00000426280 GAGE12HA6NDE8 117 aa8.2□□□□□ -1.1
GPC1-204ENST00000426280 KRTAP10-4P60372 401 aaPredicted RBP8.2□□□□□ -1.1
GPC1-204ENST00000426280 LINC00528Q8N1L1 170 aa8.2□□□□□ -1.1
GPC1-204ENST00000426280 C9orf163Q8N9P6 203 aa8.2□□□□□ -1.1
GPC1-204ENST00000426280 CHAC1Q9BUX1 264 aa8.2□□□□□ -1.1
GPC1-204ENST00000426280 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.2□□□□□ -1.1
GPC1-204ENST00000426280 FAM229AH3BQW9 127 aa8.19□□□□□ -1.1
GPC1-204ENST00000426280 K7EMI3 77 aa8.19□□□□□ -1.1
GPC1-204ENST00000426280 SMAGPQ0VAQ4 97 aa8.19□□□□□ -1.1
GPC1-204ENST00000426280 ZC2HC1BQ5TFG8 222 aa8.19□□□□□ -1.1
GPC1-204ENST00000426280 SDIM1Q6ZPB5 146 aa8.19□□□□□ -1.1
GPC1-204ENST00000426280 FA2HQ7L5A8 372 aa8.19□□□□□ -1.1
GPC1-204ENST00000426280 C15orf56Q8N910 161 aa8.19□□□□□ -1.1
GPC1-204ENST00000426280 CHCHD10Q8WYQ3 142 aaPredicted RBP8.19□□□□□ -1.1
GPC1-204ENST00000426280 SPANXA1Q9NS26 97 aa8.19□□□□□ -1.1
GPC1-204ENST00000426280 CYSLTR1Q9Y271 337 aa8.19□□□□□ -1.1
GPC1-204ENST00000426280 IGLV4-3A0A075B6K6 122 aa8.18□□□□□ -1.1
GPC1-204ENST00000426280 LINC01546A6NGU7 62 aa8.18□□□□□ -1.1
GPC1-204ENST00000426280 CCL25O15444 150 aa8.18□□□□□ -1.1
GPC1-204ENST00000426280 C14orf177Q52M58 125 aa8.18□□□□□ -1.1
GPC1-204ENST00000426280 SRRM2Q9UQ35 2752 aaKnown RBP8.18□□□□□ -1.1
GPC1-204ENST00000426280 TRAV13-1A0A0B4J241 112 aa8.17□□□□□ -1.1
GPC1-204ENST00000426280 XCL1P47992 114 aa8.17□□□□□ -1.1
GPC1-204ENST00000426280 MRPS36P82909 103 aaKnown RBP8.17□□□□□ -1.1
GPC1-204ENST00000426280 PYGO1Q9Y3Y4 419 aa8.17□□□□□ -1.1
GPC1-204ENST00000426280 hDV102S1A0JD36 115 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms