RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 LINC00269Q8N2A0 174 aa16.22■□□□□ 0.19
APOE-202ENST00000425718 RPL39P62891 51 aaKnown RBP16.21■□□□□ 0.19
APOE-202ENST00000425718 MRPS36P82909 103 aaKnown RBP16.21■□□□□ 0.19
APOE-202ENST00000425718 PAPPA-AS1Q5QFB9 102 aa16.21■□□□□ 0.19
APOE-202ENST00000425718 ZNF664Q8N3J9 261 aa16.21■□□□□ 0.19
APOE-202ENST00000425718 CDC42SE2Q9NRR3 84 aa16.21■□□□□ 0.19
APOE-202ENST00000425718 HYDINQ4G0P3 5121 aa16.2■□□□□ 0.18
APOE-202ENST00000425718 TOMM6Q96B49 74 aa16.2■□□□□ 0.18
APOE-202ENST00000425718 C1orf43Q9BWL3 253 aa16.2■□□□□ 0.18
APOE-202ENST00000425718 Q9HAA7 133 aa16.2■□□□□ 0.18
APOE-202ENST00000425718 CCL25O15444 150 aa16.19■□□□□ 0.18
APOE-202ENST00000425718 LINC00336Q6ZUF6 198 aa16.19■□□□□ 0.18
APOE-202ENST00000425718 RYR2Q92736 4967 aa16.18■□□□□ 0.18
APOE-202ENST00000425718 C1orf196B1AJZ1 125 aa16.18■□□□□ 0.18
APOE-202ENST00000425718 Q6ZN92 141 aa16.18■□□□□ 0.18
APOE-202ENST00000425718 TIMM17AQ99595 171 aa16.18■□□□□ 0.18
APOE-202ENST00000425718 PSCAO43653 123 aa16.17■□□□□ 0.18
APOE-202ENST00000425718 HBDP02042 147 aa16.17■□□□□ 0.18
APOE-202ENST00000425718 ENHOQ6UWT2 76 aa16.17■□□□□ 0.18
APOE-202ENST00000425718 TMEM141Q96I45 108 aa16.16■□□□□ 0.18
APOE-202ENST00000425718 IGKV2D-24A0A075B6R9 120 aa16.15■□□□□ 0.18
APOE-202ENST00000425718 HSBP1O75506 76 aa16.15■□□□□ 0.18
APOE-202ENST00000425718 ERASQ7Z444 233 aa16.15■□□□□ 0.18
APOE-202ENST00000425718 SS18Q15532 418 aa16.14■□□□□ 0.17
APOE-202ENST00000425718 CLPSL2Q6UWE3 100 aa16.14■□□□□ 0.17
APOE-202ENST00000425718 URB1-AS1Q96HZ7 61 aa16.14■□□□□ 0.17
APOE-202ENST00000425718 SCGB3A1Q96QR1 104 aa16.14■□□□□ 0.17
APOE-202ENST00000425718 Q6ZUT4 128 aa16.13■□□□□ 0.17
APOE-202ENST00000425718 C2orf88Q9BSF0 95 aa16.13■□□□□ 0.17
APOE-202ENST00000425718 IGIPA6NJ69 53 aa16.12■□□□□ 0.17
APOE-202ENST00000425718 HIST1H2BKO60814 126 aa16.12■□□□□ 0.17
APOE-202ENST00000425718 HIST1H2BJP06899 126 aa16.12■□□□□ 0.17
APOE-202ENST00000425718 HIST1H2BOP23527 126 aa16.12■□□□□ 0.17
APOE-202ENST00000425718 HIST1H2BBP33778 126 aa16.12■□□□□ 0.17
APOE-202ENST00000425718 HIST1H2BDP58876 126 aa16.12■□□□□ 0.17
APOE-202ENST00000425718 HIST1H2BCP62807 126 aa16.12■□□□□ 0.17
APOE-202ENST00000425718 HIST2H2BEQ16778 126 aa16.12■□□□□ 0.17
APOE-202ENST00000425718 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.12■□□□□ 0.17
APOE-202ENST00000425718 TEX43Q6ZNM6 134 aa16.12■□□□□ 0.17
APOE-202ENST00000425718 Q6ZRN7 208 aaPredicted RBP16.12■□□□□ 0.17
APOE-202ENST00000425718 HIST1H2BHQ93079 126 aa16.12■□□□□ 0.17
APOE-202ENST00000425718 HIST1H2BNQ99877 126 aa16.12■□□□□ 0.17
APOE-202ENST00000425718 HIST1H2BMQ99879 126 aa16.12■□□□□ 0.17
APOE-202ENST00000425718 IGLV4-3A0A075B6K6 122 aa16.11■□□□□ 0.17
APOE-202ENST00000425718 VCX2Q9H322 139 aa16.11■□□□□ 0.17
APOE-202ENST00000425718 IGKV3OR2-268A0A0C4DH90 116 aa16.1■□□□□ 0.17
APOE-202ENST00000425718 RTL8CO15255 209 aa16.1■□□□□ 0.17
APOE-202ENST00000425718 ATP5LO75964 103 aa16.1■□□□□ 0.17
APOE-202ENST00000425718 LINC00959A0A1B0GUT2 108 aa16.09■□□□□ 0.17
APOE-202ENST00000425718 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.09■□□□□ 0.17
APOE-202ENST00000425718 EREGO14944 169 aa16.09■□□□□ 0.17
APOE-202ENST00000425718 IFITM10A6NMD0 228 aa16.08■□□□□ 0.16
APOE-202ENST00000425718 SERF1AO75920 110 aa16.08■□□□□ 0.16
APOE-202ENST00000425718 FRAS1Q86XX4 4008 aa16.07■□□□□ 0.16
APOE-202ENST00000425718 CHCHD10Q8WYQ3 142 aaPredicted RBP16.06■□□□□ 0.16
APOE-202ENST00000425718 AMELXQ99217 191 aa16.06■□□□□ 0.16
APOE-202ENST00000425718 IGLV10-54A0A075B6I4 117 aa16.05■□□□□ 0.16
APOE-202ENST00000425718 A0A096LNJ9 63 aa16.05■□□□□ 0.16
APOE-202ENST00000425718 TRAV13-1A0A0B4J241 112 aa16.05■□□□□ 0.16
APOE-202ENST00000425718 PRSS29PA6NIE9 313 aa16.05■□□□□ 0.16
APOE-202ENST00000425718 PDZD11Q5EBL8 140 aa16.05■□□□□ 0.16
APOE-202ENST00000425718 RNASE13Q5GAN3 156 aaKnown RBP16.05■□□□□ 0.16
APOE-202ENST00000425718 SEC11AP67812 179 aa16.04■□□□□ 0.16
APOE-202ENST00000425718 OPRPNQ99935 248 aaPredicted RBP16.04■□□□□ 0.16
APOE-202ENST00000425718 PMCHL1Q16048 86 aa16.03■□□□□ 0.16
APOE-202ENST00000425718 C14orf177Q52M58 125 aa16.03■□□□□ 0.16
APOE-202ENST00000425718 CD164L2Q6UWJ8 174 aa16.03■□□□□ 0.16
APOE-202ENST00000425718 FAM104AQ969W3 186 aa16.03■□□□□ 0.16
APOE-202ENST00000425718 DNAH2Q9P225 4427 aa16.02■□□□□ 0.16
APOE-202ENST00000425718 COA6Q5JTJ3 125 aaKnown RBP16.02■□□□□ 0.16
APOE-202ENST00000425718 RYR3Q15413 4870 aa16.01■□□□□ 0.15
APOE-202ENST00000425718 PMVKQ15126 192 aa16.01■□□□□ 0.15
APOE-202ENST00000425718 CFAP161Q6P656 301 aa16.01■□□□□ 0.15
APOE-202ENST00000425718 HSPB8Q9UJY1 196 aa16.01■□□□□ 0.15
APOE-202ENST00000425718 GAGE12HA6NDE8 117 aa16■□□□□ 0.15
APOE-202ENST00000425718 LEPROTL1O95214 131 aa16■□□□□ 0.15
APOE-202ENST00000425718 XCL1P47992 114 aa16■□□□□ 0.15
APOE-202ENST00000425718 LINC00310P59036 64 aa16■□□□□ 0.15
APOE-202ENST00000425718 PACRGQ96M98 296 aaPredicted RBP16■□□□□ 0.15
APOE-202ENST00000425718 TNP2Q05952 138 aa15.99■□□□□ 0.15
APOE-202ENST00000425718 KRTAP26-1Q6PEX3 210 aa15.99■□□□□ 0.15
APOE-202ENST00000425718 FAM19A2Q8N3H0 131 aa15.99■□□□□ 0.15
APOE-202ENST00000425718 BAALCQ8WXS3 180 aa15.99■□□□□ 0.15
APOE-202ENST00000425718 DNAH10Q8IVF4 4471 aa15.99■□□□□ 0.15
APOE-202ENST00000425718 UBE2D1P51668 147 aa15.98■□□□□ 0.15
APOE-202ENST00000425718 NDUFA6P56556 154 aa15.98■□□□□ 0.15
APOE-202ENST00000425718 LINC00173Q6ZV60 143 aa15.98■□□□□ 0.15
APOE-202ENST00000425718 IFI27L1Q96BM0 104 aa15.98■□□□□ 0.15
APOE-202ENST00000425718 A0A087WTM6 91 aa15.97■□□□□ 0.15
APOE-202ENST00000425718 FAM19A3Q7Z5A8 133 aa15.97■□□□□ 0.15
APOE-202ENST00000425718 HERVK_113P63121 156 aa15.96■□□□□ 0.15
APOE-202ENST00000425718 FOXI1Q12951 378 aa15.96■□□□□ 0.15
APOE-202ENST00000425718 CST9LQ9H4G1 147 aa15.96■□□□□ 0.15
APOE-202ENST00000425718 DNAH17Q9UFH2 4485 aa15.96■□□□□ 0.15
APOE-202ENST00000425718 LRCOL1A6NCL2 159 aa15.95■□□□□ 0.14
APOE-202ENST00000425718 COX7A2LO14548 114 aa15.95■□□□□ 0.14
APOE-202ENST00000425718 PRSS1P07477 247 aa15.95■□□□□ 0.14
APOE-202ENST00000425718 APOMO95445 188 aa15.94■□□□□ 0.14
APOE-202ENST00000425718 S100A6P06703 90 aa15.94■□□□□ 0.14
APOE-202ENST00000425718 MAPKAPK5-AS1Q8N8E1 139 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 155.2 ms