RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 IGLV4-69A0A075B6H9 119 aa7.63□□□□□ -1.19
HLA-DQB3-203ENST00000425319 TRAV26-2A0A0B4J265 109 aa7.63□□□□□ -1.19
HLA-DQB3-203ENST00000425319 C1orf196B1AJZ1 125 aa7.63□□□□□ -1.19
HLA-DQB3-203ENST00000425319 CTRLP40313 264 aa7.63□□□□□ -1.19
HLA-DQB3-203ENST00000425319 CAMPP49913 170 aa7.63□□□□□ -1.19
HLA-DQB3-203ENST00000425319 CNFNQ9BYD5 112 aa7.63□□□□□ -1.19
HLA-DQB3-203ENST00000425319 A8MWL6 223 aa7.62□□□□□ -1.19
HLA-DQB3-203ENST00000425319 SMLR1H3BR10 107 aa7.62□□□□□ -1.19
HLA-DQB3-203ENST00000425319 GAS8-AS1O95177 125 aa7.62□□□□□ -1.19
HLA-DQB3-203ENST00000425319 PTTG1IPP53801 180 aa7.62□□□□□ -1.19
HLA-DQB3-203ENST00000425319 CAMK2N2Q96S95 79 aa7.62□□□□□ -1.19
HLA-DQB3-203ENST00000425319 PSORS1C2Q9UIG4 136 aa7.62□□□□□ -1.19
HLA-DQB3-203ENST00000425319 COX7A2LO14548 114 aa7.61□□□□□ -1.19
HLA-DQB3-203ENST00000425319 GATCO43716 136 aaKnown RBP7.61□□□□□ -1.19
HLA-DQB3-203ENST00000425319 PPP1R17O96001 155 aa7.61□□□□□ -1.19
HLA-DQB3-203ENST00000425319 FCER1GP30273 86 aa7.61□□□□□ -1.19
HLA-DQB3-203ENST00000425319 TMEM18Q96B42 140 aa7.61□□□□□ -1.19
HLA-DQB3-203ENST00000425319 RPL39LQ96EH5 51 aaKnown RBP7.61□□□□□ -1.19
HLA-DQB3-203ENST00000425319 DIRC1Q969H9 104 aa7.6□□□□□ -1.19
HLA-DQB3-203ENST00000425319 TRBV6-5A0A0K0K1A5 114 aa7.59□□□□□ -1.19
HLA-DQB3-203ENST00000425319 C7orf77A4D0Y5 90 aa7.59□□□□□ -1.19
HLA-DQB3-203ENST00000425319 VCYO14598 125 aa7.59□□□□□ -1.19
HLA-DQB3-203ENST00000425319 BCL2P10415 239 aa7.59□□□□□ -1.19
HLA-DQB3-203ENST00000425319 C1orf137Q5JT78 98 aa7.59□□□□□ -1.19
HLA-DQB3-203ENST00000425319 MRPL52Q86TS9 123 aaKnown RBP7.59□□□□□ -1.19
HLA-DQB3-203ENST00000425319 AKAP14Q86UN6 197 aa7.59□□□□□ -1.19
HLA-DQB3-203ENST00000425319 LINC00526Q96FQ7 95 aa7.59□□□□□ -1.19
HLA-DQB3-203ENST00000425319 RNASE7Q9H1E1 156 aaKnown RBP7.59□□□□□ -1.19
HLA-DQB3-203ENST00000425319 CDC42SE2Q9NRR3 84 aa7.59□□□□□ -1.19
HLA-DQB3-203ENST00000425319 F8WDY8 70 aa7.58□□□□□ -1.2
HLA-DQB3-203ENST00000425319 RPL18AQ02543 176 aaKnown RBP7.58□□□□□ -1.2
HLA-DQB3-203ENST00000425319 OCC1Q8TAD7 63 aa7.58□□□□□ -1.2
HLA-DQB3-203ENST00000425319 C2orf48Q96LS8 159 aa7.58□□□□□ -1.2
HLA-DQB3-203ENST00000425319 IMMP2LQ96T52 175 aa7.58□□□□□ -1.2
HLA-DQB3-203ENST00000425319 KIR2DL4Q99706 377 aa7.58□□□□□ -1.2
HLA-DQB3-203ENST00000425319 A0A0U1RQV1 116 aa7.57□□□□□ -1.2
HLA-DQB3-203ENST00000425319 ESDP10768 282 aa7.57□□□□□ -1.2
HLA-DQB3-203ENST00000425319 C9orf116Q5BN46 136 aaPredicted RBP7.57□□□□□ -1.2
HLA-DQB3-203ENST00000425319 A0A087WZ39 114 aa7.56□□□□□ -1.2
HLA-DQB3-203ENST00000425319 RNF151Q2KHN1 245 aa7.56□□□□□ -1.2
HLA-DQB3-203ENST00000425319 NUP35Q8NFH5 326 aa7.56□□□□□ -1.2
HLA-DQB3-203ENST00000425319 TMEM242Q9NWH2 141 aa7.56□□□□□ -1.2
HLA-DQB3-203ENST00000425319 CSDC2Q9Y534 153 aaKnown RBP7.56□□□□□ -1.2
HLA-DQB3-203ENST00000425319 TRBV20OR9-2A0A075B6H5 130 aa7.55□□□□□ -1.2
HLA-DQB3-203ENST00000425319 TRBV27A0A0K0K1C4 114 aa7.55□□□□□ -1.2
HLA-DQB3-203ENST00000425319 TCAPO15273 167 aa7.55□□□□□ -1.2
HLA-DQB3-203ENST00000425319 TMEM241Q24JQ0 296 aa7.55□□□□□ -1.2
HLA-DQB3-203ENST00000425319 TMEM191AQ9H0A3 160 aa7.55□□□□□ -1.2
HLA-DQB3-203ENST00000425319 TRAV13-1A0A0B4J241 112 aa7.54□□□□□ -1.2
HLA-DQB3-203ENST00000425319 A0A1B0GUT8 65 aa7.54□□□□□ -1.2
HLA-DQB3-203ENST00000425319 A0A1W2PNN7 141 aa7.54□□□□□ -1.2
HLA-DQB3-203ENST00000425319 PPP1R2P9O14990 202 aa7.54□□□□□ -1.2
HLA-DQB3-203ENST00000425319 TSHBP01222 138 aa7.54□□□□□ -1.2
HLA-DQB3-203ENST00000425319 UBE2D1P51668 147 aa7.54□□□□□ -1.2
HLA-DQB3-203ENST00000425319 FOXA3P55318 350 aaPredicted RBP7.54□□□□□ -1.2
HLA-DQB3-203ENST00000425319 RIGQ13278 110 aa7.54□□□□□ -1.2
HLA-DQB3-203ENST00000425319 CT83Q5H943 113 aa7.54□□□□□ -1.2
HLA-DQB3-203ENST00000425319 FAM231DQ6ZW35 169 aa7.54□□□□□ -1.2
HLA-DQB3-203ENST00000425319 TMEM250H0YL14 139 aa7.53□□□□□ -1.2
HLA-DQB3-203ENST00000425319 POLR2KP53803 58 aaKnown RBP7.53□□□□□ -1.2
HLA-DQB3-203ENST00000425319 SLC51BQ86UW2 128 aa7.53□□□□□ -1.2
HLA-DQB3-203ENST00000425319 TCTE3Q8IZS6 198 aa7.53□□□□□ -1.2
HLA-DQB3-203ENST00000425319 OR10D4PQ8NGN7 298 aa7.53□□□□□ -1.2
HLA-DQB3-203ENST00000425319 IGLV1-50A0A075B6I6 118 aa7.52□□□□□ -1.21
HLA-DQB3-203ENST00000425319 K7EN84 100 aa7.52□□□□□ -1.21
HLA-DQB3-203ENST00000425319 NDUFA1O15239 70 aa7.52□□□□□ -1.21
HLA-DQB3-203ENST00000425319 IGLV7-43P04211 117 aa7.52□□□□□ -1.21
HLA-DQB3-203ENST00000425319 RPL13AP40429 203 aaKnown RBP7.52□□□□□ -1.21
HLA-DQB3-203ENST00000425319 CEBPGP53567 150 aa7.52□□□□□ -1.21
HLA-DQB3-203ENST00000425319 BLOC1S1P78537 153 aa7.52□□□□□ -1.21
HLA-DQB3-203ENST00000425319 SPAG11BQ08648 103 aa7.52□□□□□ -1.21
HLA-DQB3-203ENST00000425319 C5orf38Q86SI9 138 aa7.52□□□□□ -1.21
HLA-DQB3-203ENST00000425319 RAB4AP20338 218 aa7.51□□□□□ -1.21
HLA-DQB3-203ENST00000425319 UBE2BP63146 152 aa7.51□□□□□ -1.21
HLA-DQB3-203ENST00000425319 PHF5AQ7RTV0 110 aaKnown RBP7.51□□□□□ -1.21
HLA-DQB3-203ENST00000425319 OPRPNQ99935 248 aaPredicted RBP7.51□□□□□ -1.21
HLA-DQB3-203ENST00000425319 MRPL35Q9NZE8 188 aaKnown RBP7.51□□□□□ -1.21
HLA-DQB3-203ENST00000425319 HIGD1CA8MV81 97 aa7.5□□□□□ -1.21
HLA-DQB3-203ENST00000425319 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.5□□□□□ -1.21
HLA-DQB3-203ENST00000425319 SUMO2P61956 95 aaKnown RBP7.5□□□□□ -1.21
HLA-DQB3-203ENST00000425319 PRR4Q16378 134 aa7.5□□□□□ -1.21
HLA-DQB3-203ENST00000425319 PRR26Q8N8Z3 221 aa7.5□□□□□ -1.21
HLA-DQB3-203ENST00000425319 TIMM21Q9BVV7 248 aa7.5□□□□□ -1.21
HLA-DQB3-203ENST00000425319 H0Y9J4 135 aa7.49□□□□□ -1.21
HLA-DQB3-203ENST00000425319 ORAOV1Q8WV07 137 aa7.49□□□□□ -1.21
HLA-DQB3-203ENST00000425319 UBE2D4Q9Y2X8 147 aa7.49□□□□□ -1.21
HLA-DQB3-203ENST00000425319 LINC00862A6NCI5 91 aa7.48□□□□□ -1.21
HLA-DQB3-203ENST00000425319 AMN1Q8IY45 258 aa7.48□□□□□ -1.21
HLA-DQB3-203ENST00000425319 EIF5A2Q9GZV4 153 aaKnown RBP7.48□□□□□ -1.21
HLA-DQB3-203ENST00000425319 RNF213Q63HN8 5207 aa7.47□□□□□ -1.21
HLA-DQB3-203ENST00000425319 TGIF2-C20orf24A0A0A6YYL0 155 aa7.47□□□□□ -1.21
HLA-DQB3-203ENST00000425319 PACRGQ96M98 296 aaPredicted RBP7.47□□□□□ -1.21
HLA-DQB3-203ENST00000425319 SMIM7Q9BQ49 75 aa7.47□□□□□ -1.21
HLA-DQB3-203ENST00000425319 C20orf78Q9BR46 151 aa7.47□□□□□ -1.21
HLA-DQB3-203ENST00000425319 OSTCQ9NRP0 149 aa7.47□□□□□ -1.21
HLA-DQB3-203ENST00000425319 ZNF727A8MUV8 499 aa7.46□□□□□ -1.22
HLA-DQB3-203ENST00000425319 CKS2P33552 79 aa7.46□□□□□ -1.22
HLA-DQB3-203ENST00000425319 HBBP68871 147 aa7.46□□□□□ -1.22
HLA-DQB3-203ENST00000425319 GAGE2EQ4V326 116 aa7.46□□□□□ -1.22
HLA-DQB3-203ENST00000425319 RNASE13Q5GAN3 156 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms